RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 KRTAP12-1P59990 96 aa3.61□□□□□ -1.83
USP6NL-203ENST00000443016 KRTAP8-1Q8IUC2 63 aa3.61□□□□□ -1.83
USP6NL-203ENST00000443016 KRTAP12-2P59991 146 aa3.59□□□□□ -1.84
USP6NL-203ENST00000443016 SPRR2EP22531 72 aa3.58□□□□□ -1.84
USP6NL-203ENST00000443016 SPRR2BP35325 72 aa3.58□□□□□ -1.84
USP6NL-203ENST00000443016 SPRR2AP35326 72 aa3.58□□□□□ -1.84
USP6NL-203ENST00000443016 KRTAP2-2Q9BYT5 123 aa3.56□□□□□ -1.84
USP6NL-203ENST00000443016 KRTAP4-8A0A0G2JLE6 195 aa3.53□□□□□ -1.84
USP6NL-203ENST00000443016 KRTAP2-3P0C7H8 128 aa3.53□□□□□ -1.84
USP6NL-203ENST00000443016 KRTAP4-8Q9BYQ9 185 aa3.53□□□□□ -1.84
USP6NL-203ENST00000443016 KRTAP2-4Q9BYR9 128 aa3.53□□□□□ -1.84
USP6NL-203ENST00000443016 KRTAP10-7P60409 375 aaPredicted RBP3.5□□□□□ -1.85
USP6NL-203ENST00000443016 LCE1AQ5T7P2 110 aa3.5□□□□□ -1.85
USP6NL-203ENST00000443016 KRTAP10-12P60413 245 aa3.47□□□□□ -1.85
USP6NL-203ENST00000443016 INE1O15225 51 aa3.46□□□□□ -1.86
USP6NL-203ENST00000443016 SPRR2DP22532 72 aa3.46□□□□□ -1.86
USP6NL-203ENST00000443016 KRTAP2-1Q9BYU5 128 aa3.43□□□□□ -1.86
USP6NL-203ENST00000443016 C10orf95Q9H7T3 257 aa3.41□□□□□ -1.86
USP6NL-203ENST00000443016 TNP1P09430 55 aa3.4□□□□□ -1.87
USP6NL-203ENST00000443016 LCE3BQ5TA77 95 aa3.36□□□□□ -1.87
USP6NL-203ENST00000443016 LCE3CQ5T5A8 94 aa3.35□□□□□ -1.87
USP6NL-203ENST00000443016 KRTAP5-3Q6L8H2 238 aa3.35□□□□□ -1.87
USP6NL-203ENST00000443016 KRTAP4-12Q9BQ66 201 aa3.35□□□□□ -1.87
USP6NL-203ENST00000443016 DSTQ03001 7570 aaKnown RBP3.33□□□□□ -1.88
USP6NL-203ENST00000443016 KRTAP4-7Q9BYR0 210 aa3.31□□□□□ -1.88
USP6NL-203ENST00000443016 KRTAP19-7Q3SYF9 63 aa3.27□□□□□ -1.89
USP6NL-203ENST00000443016 MT1EP04732 61 aa3.25□□□□□ -1.89
USP6NL-203ENST00000443016 PP632Q6XCG6 107 aa3.24□□□□□ -1.89
USP6NL-203ENST00000443016 KRTAP19-3Q7Z4W3 81 aa3.24□□□□□ -1.89
USP6NL-203ENST00000443016 LCE3AQ5TA76 89 aa3.23□□□□□ -1.89
USP6NL-203ENST00000443016 MT3P25713 68 aa3.2□□□□□ -1.9
USP6NL-203ENST00000443016 KRTAP19-5Q3LI72 72 aa3.2□□□□□ -1.9
USP6NL-203ENST00000443016 MT1GP13640 62 aa3.16□□□□□ -1.9
USP6NL-203ENST00000443016 LCE1EQ5T753 118 aa3.16□□□□□ -1.9
USP6NL-203ENST00000443016 LCE1DQ5T752 114 aa3.15□□□□□ -1.91
USP6NL-203ENST00000443016 KRTAP4-9Q9BYQ8 210 aa3.14□□□□□ -1.91
USP6NL-203ENST00000443016 KRTAP12-3P60328 96 aa3.13□□□□□ -1.91
USP6NL-203ENST00000443016 LCE3EQ5T5B0 92 aa3.12□□□□□ -1.91
USP6NL-203ENST00000443016 KRTAP4-2Q9BYR5 136 aa3.12□□□□□ -1.91
USP6NL-203ENST00000443016 MT1MQ8N339 61 aa3.1□□□□□ -1.91
USP6NL-203ENST00000443016 MT1LQ93083 61 aa3.1□□□□□ -1.91
USP6NL-203ENST00000443016 GPR98Q8WXG9 6306 aa3.09□□□□□ -1.91
USP6NL-203ENST00000443016 HMCN1Q96RW7 5635 aa3.04□□□□□ -1.92
USP6NL-203ENST00000443016 MT4P47944 62 aa3.04□□□□□ -1.92
USP6NL-203ENST00000443016 KRTAP4-3Q9BYR4 195 aa3.03□□□□□ -1.92
USP6NL-203ENST00000443016 SPRR5A0A1B0GTR4 108 aa3.01□□□□□ -1.93
USP6NL-203ENST00000443016 KRTAP5-4Q6L8H1 288 aa2.94□□□□□ -1.94
USP6NL-203ENST00000443016 KRTAP4-11Q9BYQ6 195 aa2.94□□□□□ -1.94
USP6NL-203ENST00000443016 AHNAK2Q8IVF2 5795 aa2.87□□□□□ -1.95
USP6NL-203ENST00000443016 LCE3DQ9BYE3 92 aa2.86□□□□□ -1.95
USP6NL-203ENST00000443016 KRTAP5-10Q6L8G5 202 aa2.82□□□□□ -1.96
USP6NL-203ENST00000443016 KRTAP5-5Q701N2 237 aaPredicted RBP2.82□□□□□ -1.96
USP6NL-203ENST00000443016 KRTAP12-4P60329 112 aa2.81□□□□□ -1.96
USP6NL-203ENST00000443016 SYNE1Q8NF91 8797 aaKnown RBP2.81□□□□□ -1.96
USP6NL-203ENST00000443016 KRTAP20-2Q3LI61 65 aa2.8□□□□□ -1.96
USP6NL-203ENST00000443016 KRTAP5-7Q6L8G8 165 aa2.71□□□□□ -1.97
USP6NL-203ENST00000443016 KRTAP9-6A8MVA2 160 aa2.68□□□□□ -1.98
USP6NL-203ENST00000443016 MT1AP04731 61 aa2.63□□□□□ -1.99
USP6NL-203ENST00000443016 OBSCNQ5VST9 7968 aa2.63□□□□□ -1.99
USP6NL-203ENST00000443016 KRTAP6-1Q3LI64 71 aa2.62□□□□□ -1.99
USP6NL-203ENST00000443016 KRTAP5-2Q701N4 177 aa2.57□□□□□ -2
USP6NL-203ENST00000443016 KRTAP6-2Q3LI66 62 aa2.53□□□□□ -2
USP6NL-203ENST00000443016 KRTAP5-8O75690 187 aa2.47□□□□□ -2.01
USP6NL-203ENST00000443016 MUC5BQ9HC84 5762 aaPredicted RBP2.42□□□□□ -2.02
USP6NL-203ENST00000443016 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.42□□□□□ -2.02
USP6NL-203ENST00000443016 MUC5ACP98088 5654 aa2.4□□□□□ -2.03
USP6NL-203ENST00000443016 AHNAKQ09666 5890 aaKnown RBP2.37□□□□□ -2.03
USP6NL-203ENST00000443016 KRTAP5-1Q6L8H4 278 aa2.32□□□□□ -2.04
USP6NL-203ENST00000443016 LCE1BQ5T7P3 118 aa2.14□□□□□ -2.07
USP6NL-203ENST00000443016 LCE1CQ5T751 118 aa2.07□□□□□ -2.08
USP6NL-203ENST00000443016 KRTAP5-11Q6L8G4 156 aa1.95□□□□□ -2.1
USP6NL-203ENST00000443016 MUC19Q7Z5P9 8384 aa1.91□□□□□ -2.1
USP6NL-203ENST00000443016 KRTAP4-4Q9BYR3 166 aa1.89□□□□□ -2.11
USP6NL-203ENST00000443016 PRM1P04553 51 aa1.76□□□□□ -2.13
USP6NL-203ENST00000443016 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
USP6NL-203ENST00000443016 PHGR1C9JFL3 82 aa1.68□□□□□ -2.14
USP6NL-203ENST00000443016 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
USP6NL-203ENST00000443016 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 88.7 ms