RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 KRTAP19-5Q3LI72 72 aa4.97□□□□□ -1.61
PTPRE-203ENST00000442830 SPINT4Q6UDR6 99 aa4.97□□□□□ -1.61
PTPRE-203ENST00000442830 COA5Q86WW8 74 aa4.97□□□□□ -1.61
PTPRE-203ENST00000442830 A0A1B0GU33 70 aa4.93□□□□□ -1.62
PTPRE-203ENST00000442830 MT1MQ8N339 61 aa4.92□□□□□ -1.62
PTPRE-203ENST00000442830 HMCN1Q96RW7 5635 aa4.91□□□□□ -1.62
PTPRE-203ENST00000442830 MT4P47944 62 aa4.91□□□□□ -1.62
PTPRE-203ENST00000442830 SPATA8Q6RVD6 105 aa4.91□□□□□ -1.62
PTPRE-203ENST00000442830 KRTAP12-1P59990 96 aa4.89□□□□□ -1.63
PTPRE-203ENST00000442830 RPS28P62857 69 aaKnown RBP4.88□□□□□ -1.63
PTPRE-203ENST00000442830 MT1LQ93083 61 aa4.88□□□□□ -1.63
PTPRE-203ENST00000442830 SMIM26A0A096LP01 95 aa4.86□□□□□ -1.63
PTPRE-203ENST00000442830 KRTAP5-4Q6L8H1 288 aa4.84□□□□□ -1.63
PTPRE-203ENST00000442830 TNP1P09430 55 aa4.81□□□□□ -1.64
PTPRE-203ENST00000442830 AHNAK2Q8IVF2 5795 aa4.8□□□□□ -1.64
PTPRE-203ENST00000442830 C10orf95Q9H7T3 257 aa4.78□□□□□ -1.64
PTPRE-203ENST00000442830 KRTAP5-10Q6L8G5 202 aa4.77□□□□□ -1.65
PTPRE-203ENST00000442830 A0A1B0GU69 56 aa4.76□□□□□ -1.65
PTPRE-203ENST00000442830 LCE3AQ5TA76 89 aa4.76□□□□□ -1.65
PTPRE-203ENST00000442830 KRTAP4-3Q9BYR4 195 aa4.71□□□□□ -1.66
PTPRE-203ENST00000442830 V9GYY9 64 aa4.69□□□□□ -1.66
PTPRE-203ENST00000442830 A8MU10 97 aa4.66□□□□□ -1.66
PTPRE-203ENST00000442830 KRTAP5-7Q6L8G8 165 aa4.66□□□□□ -1.66
PTPRE-203ENST00000442830 Q1T7F1 81 aa4.63□□□□□ -1.67
PTPRE-203ENST00000442830 KRTAP12-3P60328 96 aa4.62□□□□□ -1.67
PTPRE-203ENST00000442830 PRR15LQ9BU68 103 aa4.62□□□□□ -1.67
PTPRE-203ENST00000442830 SPRR5A0A1B0GTR4 108 aa4.59□□□□□ -1.67
PTPRE-203ENST00000442830 KRTAP20-2Q3LI61 65 aa4.58□□□□□ -1.68
PTPRE-203ENST00000442830 LINC01558Q9Y6Z2 57 aa4.58□□□□□ -1.68
PTPRE-203ENST00000442830 KRTAP12-4P60329 112 aa4.55□□□□□ -1.68
PTPRE-203ENST00000442830 KRTAP5-5Q701N2 237 aaPredicted RBP4.53□□□□□ -1.68
PTPRE-203ENST00000442830 SVIPQ8NHG7 77 aa4.49□□□□□ -1.69
PTPRE-203ENST00000442830 KRTAP25-1Q3LHN0 102 aa4.44□□□□□ -1.7
PTPRE-203ENST00000442830 UQCR11O14957 56 aa4.42□□□□□ -1.7
PTPRE-203ENST00000442830 PSPHP1O15172 72 aa4.42□□□□□ -1.7
PTPRE-203ENST00000442830 A6NED7 52 aa4.35□□□□□ -1.71
PTPRE-203ENST00000442830 K7ERS5 55 aa4.33□□□□□ -1.72
PTPRE-203ENST00000442830 CDC42SE1Q9NRR8 79 aa4.33□□□□□ -1.72
PTPRE-203ENST00000442830 SYNE1Q8NF91 8797 aaKnown RBP4.31□□□□□ -1.72
PTPRE-203ENST00000442830 MIR22HGQ0VDD5 57 aa4.29□□□□□ -1.72
PTPRE-203ENST00000442830 KRTAP5-11Q6L8G4 156 aa4.28□□□□□ -1.72
PTPRE-203ENST00000442830 BRK1Q8WUW1 75 aa4.27□□□□□ -1.73
PTPRE-203ENST00000442830 PRO0628Q9UI54 55 aa4.27□□□□□ -1.73
PTPRE-203ENST00000442830 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.26□□□□□ -1.73
PTPRE-203ENST00000442830 LCE3CQ5T5A8 94 aa4.23□□□□□ -1.73
PTPRE-203ENST00000442830 KRTAP5-2Q701N4 177 aa4.2□□□□□ -1.74
PTPRE-203ENST00000442830 MT1AP04731 61 aa4.18□□□□□ -1.74
PTPRE-203ENST00000442830 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
PTPRE-203ENST00000442830 KRTAP6-1Q3LI64 71 aa4.11□□□□□ -1.75
PTPRE-203ENST00000442830 KRTAP5-8O75690 187 aa4.08□□□□□ -1.76
PTPRE-203ENST00000442830 PMAIP1Q13794 54 aa4.07□□□□□ -1.76
PTPRE-203ENST00000442830 MT3P25713 68 aa4.02□□□□□ -1.77
PTPRE-203ENST00000442830 MUC5ACP98088 5654 aa4.01□□□□□ -1.77
PTPRE-203ENST00000442830 AHNAKQ09666 5890 aaKnown RBP4□□□□□ -1.77
PTPRE-203ENST00000442830 MUC5BQ9HC84 5762 aaPredicted RBP3.99□□□□□ -1.77
PTPRE-203ENST00000442830 KRTAP6-2Q3LI66 62 aa3.98□□□□□ -1.77
PTPRE-203ENST00000442830 OBSCNQ5VST9 7968 aa3.97□□□□□ -1.77
PTPRE-203ENST00000442830 ROMO1P60602 79 aa3.95□□□□□ -1.78
PTPRE-203ENST00000442830 KTN1-AS1Q86SY8 53 aa3.95□□□□□ -1.78
PTPRE-203ENST00000442830 KRTAP9-6A8MVA2 160 aa3.9□□□□□ -1.79
PTPRE-203ENST00000442830 KRTAP5-1Q6L8H4 278 aa3.79□□□□□ -1.8
PTPRE-203ENST00000442830 PRAC1Q96KF2 57 aa3.71□□□□□ -1.82
PTPRE-203ENST00000442830 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
PTPRE-203ENST00000442830 A0A0A0MQY5 61 aa3.66□□□□□ -1.82
PTPRE-203ENST00000442830 KRTAP4-4Q9BYR3 166 aa3.55□□□□□ -1.84
PTPRE-203ENST00000442830 LCE1CQ5T751 118 aa3.35□□□□□ -1.87
PTPRE-203ENST00000442830 LCE1BQ5T7P3 118 aa3.35□□□□□ -1.87
PTPRE-203ENST00000442830 LUZP6Q538Z0 58 aa3.18□□□□□ -1.9
PTPRE-203ENST00000442830 LCE3EQ5T5B0 92 aa3.15□□□□□ -1.91
PTPRE-203ENST00000442830 NDUFAF8A1L188 74 aa3.13□□□□□ -1.91
PTPRE-203ENST00000442830 LCE3DQ9BYE3 92 aa3.02□□□□□ -1.93
PTPRE-203ENST00000442830 PHGR1C9JFL3 82 aa2.8□□□□□ -1.96
PTPRE-203ENST00000442830 KRTAP21-2Q3LI59 83 aa2.71□□□□□ -1.98
PTPRE-203ENST00000442830 INE1O15225 51 aa2.61□□□□□ -1.99
PTPRE-203ENST00000442830 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
PTPRE-203ENST00000442830 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
PTPRE-203ENST00000442830 PRM1P04553 51 aa2□□□□□ -2.09
PTPRE-203ENST00000442830 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 12 ms