RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 KRTAP25-1Q3LHN0 102 aa5.83□□□□□ -1.48
USP39-205ENST00000442708 KRTAP19-3Q7Z4W3 81 aa5.81□□□□□ -1.48
USP39-205ENST00000442708 LCE3BQ5TA77 95 aa5.8□□□□□ -1.48
USP39-205ENST00000442708 LCE5AQ5TCM9 118 aa5.8□□□□□ -1.48
USP39-205ENST00000442708 MT1LQ93083 61 aa5.74□□□□□ -1.49
USP39-205ENST00000442708 KRTAP12-3P60328 96 aa5.7□□□□□ -1.5
USP39-205ENST00000442708 MT1GP13640 62 aa5.69□□□□□ -1.5
USP39-205ENST00000442708 ROMO1P60602 79 aa5.69□□□□□ -1.5
USP39-205ENST00000442708 MT1MQ8N339 61 aa5.64□□□□□ -1.51
USP39-205ENST00000442708 KRTAP23-1A1A580 65 aa5.63□□□□□ -1.51
USP39-205ENST00000442708 GPR98Q8WXG9 6306 aa5.61□□□□□ -1.51
USP39-205ENST00000442708 KRTAP4-9Q9BYQ8 210 aa5.6□□□□□ -1.51
USP39-205ENST00000442708 PP632Q6XCG6 107 aa5.59□□□□□ -1.51
USP39-205ENST00000442708 BRK1Q8WUW1 75 aa5.55□□□□□ -1.52
USP39-205ENST00000442708 KRTAP4-3Q9BYR4 195 aa5.55□□□□□ -1.52
USP39-205ENST00000442708 DSTQ03001 7570 aaKnown RBP5.54□□□□□ -1.52
USP39-205ENST00000442708 KRTAP4-7Q9BYR0 210 aa5.52□□□□□ -1.53
USP39-205ENST00000442708 KRTAP15-1Q3LI76 137 aa5.43□□□□□ -1.54
USP39-205ENST00000442708 LCE1DQ5T752 114 aa5.38□□□□□ -1.55
USP39-205ENST00000442708 KRTAP19-4Q3LI73 84 aa5.32□□□□□ -1.56
USP39-205ENST00000442708 KRTAP5-10Q6L8G5 202 aa5.31□□□□□ -1.56
USP39-205ENST00000442708 LCE3CQ5T5A8 94 aa5.29□□□□□ -1.56
USP39-205ENST00000442708 PRO0628Q9UI54 55 aa5.26□□□□□ -1.57
USP39-205ENST00000442708 MT4P47944 62 aa5.23□□□□□ -1.57
USP39-205ENST00000442708 PMAIP1Q13794 54 aa5.22□□□□□ -1.57
USP39-205ENST00000442708 LOC100996750A0A140TA64 210 aa5.21□□□□□ -1.58
USP39-205ENST00000442708 KRTAP5-4Q6L8H1 288 aa5.2□□□□□ -1.58
USP39-205ENST00000442708 LCE4AQ5TA78 99 aa5.18□□□□□ -1.58
USP39-205ENST00000442708 KRTAP5-7Q6L8G8 165 aa5.16□□□□□ -1.58
USP39-205ENST00000442708 KRTAP5-5Q701N2 237 aaPredicted RBP5.16□□□□□ -1.58
USP39-205ENST00000442708 HMCN1Q96RW7 5635 aa5.15□□□□□ -1.58
USP39-205ENST00000442708 AHNAK2Q8IVF2 5795 aa5.14□□□□□ -1.59
USP39-205ENST00000442708 KRTAP9-6A8MVA2 160 aa5.06□□□□□ -1.6
USP39-205ENST00000442708 KRTAP4-6Q9BYQ5 205 aa5.06□□□□□ -1.6
USP39-205ENST00000442708 KRTAP5-3Q6L8H2 238 aa5.04□□□□□ -1.6
USP39-205ENST00000442708 PRAC1Q96KF2 57 aa5.03□□□□□ -1.6
USP39-205ENST00000442708 SPRR5A0A1B0GTR4 108 aa4.95□□□□□ -1.62
USP39-205ENST00000442708 KTN1-AS1Q86SY8 53 aa4.89□□□□□ -1.63
USP39-205ENST00000442708 KRTAP20-2Q3LI61 65 aa4.88□□□□□ -1.63
USP39-205ENST00000442708 MT1AP04731 61 aa4.87□□□□□ -1.63
USP39-205ENST00000442708 KRTAP12-4P60329 112 aa4.87□□□□□ -1.63
USP39-205ENST00000442708 KRTAP6-1Q3LI64 71 aa4.86□□□□□ -1.63
USP39-205ENST00000442708 SYNE1Q8NF91 8797 aaKnown RBP4.78□□□□□ -1.64
USP39-205ENST00000442708 SVIPQ8NHG7 77 aa4.77□□□□□ -1.65
USP39-205ENST00000442708 KRTAP9-4Q9BYQ2 154 aa4.68□□□□□ -1.66
USP39-205ENST00000442708 KRTAP5-2Q701N4 177 aa4.61□□□□□ -1.67
USP39-205ENST00000442708 KRTAP6-2Q3LI66 62 aa4.57□□□□□ -1.68
USP39-205ENST00000442708 KRTAP4-11Q9BYQ6 195 aa4.48□□□□□ -1.69
USP39-205ENST00000442708 MT3P25713 68 aa4.41□□□□□ -1.7
USP39-205ENST00000442708 KRTAP5-8O75690 187 aa4.4□□□□□ -1.71
USP39-205ENST00000442708 H3BS24 57 aa4.36□□□□□ -1.71
USP39-205ENST00000442708 MUC5ACP98088 5654 aa4.34□□□□□ -1.71
USP39-205ENST00000442708 MUC5BQ9HC84 5762 aaPredicted RBP4.26□□□□□ -1.73
USP39-205ENST00000442708 AHNAKQ09666 5890 aaKnown RBP4.23□□□□□ -1.73
USP39-205ENST00000442708 OBSCNQ5VST9 7968 aa4.2□□□□□ -1.74
USP39-205ENST00000442708 KRTAP9-9Q9BYP9 154 aa4.19□□□□□ -1.74
USP39-205ENST00000442708 KRTAP5-1Q6L8H4 278 aa4.09□□□□□ -1.75
USP39-205ENST00000442708 LUZP6Q538Z0 58 aa4.08□□□□□ -1.76
USP39-205ENST00000442708 LCE1EQ5T753 118 aa3.97□□□□□ -1.77
USP39-205ENST00000442708 LCE3DQ9BYE3 92 aa3.86□□□□□ -1.79
USP39-205ENST00000442708 KRTAP4-2Q9BYR5 136 aa3.78□□□□□ -1.8
USP39-205ENST00000442708 NDUFAF8A1L188 74 aa3.74□□□□□ -1.81
USP39-205ENST00000442708 LCE1BQ5T7P3 118 aa3.74□□□□□ -1.81
USP39-205ENST00000442708 LCE1CQ5T751 118 aa3.71□□□□□ -1.82
USP39-205ENST00000442708 KRTAP4-12Q9BQ66 201 aa3.71□□□□□ -1.82
USP39-205ENST00000442708 LCE3EQ5T5B0 92 aa3.68□□□□□ -1.82
USP39-205ENST00000442708 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.41□□□□□ -1.86
USP39-205ENST00000442708 A0A0A0MQY5 61 aa3.35□□□□□ -1.87
USP39-205ENST00000442708 KRTAP5-11Q6L8G4 156 aa3.33□□□□□ -1.88
USP39-205ENST00000442708 KRTAP21-2Q3LI59 83 aa3.19□□□□□ -1.9
USP39-205ENST00000442708 INE1O15225 51 aa3.17□□□□□ -1.9
USP39-205ENST00000442708 LCE1FQ5T754 118 aa3.13□□□□□ -1.91
USP39-205ENST00000442708 PHGR1C9JFL3 82 aa3.09□□□□□ -1.91
USP39-205ENST00000442708 PRM1P04553 51 aa2.95□□□□□ -1.94
USP39-205ENST00000442708 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.95
USP39-205ENST00000442708 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
USP39-205ENST00000442708 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
USP39-205ENST00000442708 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 199.2 ms