RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 SPRR2EP22531 72 aa4.91□□□□□ -1.62
AC009404.1-202ENST00000439955 SPRR2BP35325 72 aa4.91□□□□□ -1.62
AC009404.1-202ENST00000439955 SPRR2AP35326 72 aa4.91□□□□□ -1.62
AC009404.1-202ENST00000439955 KRTAP10-5P60370 271 aa4.91□□□□□ -1.62
AC009404.1-202ENST00000439955 KRTAP2-2Q9BYT5 123 aa4.91□□□□□ -1.62
AC009404.1-202ENST00000439955 KRTAP2-1Q9BYU5 128 aa4.91□□□□□ -1.62
AC009404.1-202ENST00000439955 PMAIP1Q13794 54 aa4.88□□□□□ -1.63
AC009404.1-202ENST00000439955 MT1XP80297 61 aa4.86□□□□□ -1.63
AC009404.1-202ENST00000439955 SPRR2FQ96RM1 72 aa4.86□□□□□ -1.63
AC009404.1-202ENST00000439955 PRO2289Q9P1D8 64 aa4.86□□□□□ -1.63
AC009404.1-202ENST00000439955 ROMO1P60602 79 aa4.83□□□□□ -1.64
AC009404.1-202ENST00000439955 C10orf95Q9H7T3 257 aa4.82□□□□□ -1.64
AC009404.1-202ENST00000439955 LCE1AQ5T7P2 110 aa4.76□□□□□ -1.65
AC009404.1-202ENST00000439955 SPRR2DP22532 72 aa4.75□□□□□ -1.65
AC009404.1-202ENST00000439955 KRTAP25-1Q3LHN0 102 aa4.74□□□□□ -1.65
AC009404.1-202ENST00000439955 TNP1P09430 55 aa4.73□□□□□ -1.65
AC009404.1-202ENST00000439955 SVIPQ8NHG7 77 aa4.73□□□□□ -1.65
AC009404.1-202ENST00000439955 KTN1-AS1Q86SY8 53 aa4.68□□□□□ -1.66
AC009404.1-202ENST00000439955 KRTAP8-1Q8IUC2 63 aa4.67□□□□□ -1.66
AC009404.1-202ENST00000439955 KRTAP10-7P60409 375 aaPredicted RBP4.63□□□□□ -1.67
AC009404.1-202ENST00000439955 KRTAP10-12P60413 245 aa4.63□□□□□ -1.67
AC009404.1-202ENST00000439955 DSTQ03001 7570 aaKnown RBP4.62□□□□□ -1.67
AC009404.1-202ENST00000439955 PP632Q6XCG6 107 aa4.58□□□□□ -1.68
AC009404.1-202ENST00000439955 PRAC1Q96KF2 57 aa4.54□□□□□ -1.68
AC009404.1-202ENST00000439955 LCE3AQ5TA76 89 aa4.51□□□□□ -1.69
AC009404.1-202ENST00000439955 A0A0A0MQY5 61 aa4.4□□□□□ -1.71
AC009404.1-202ENST00000439955 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.4□□□□□ -1.71
AC009404.1-202ENST00000439955 KRTAP12-3P60328 96 aa4.35□□□□□ -1.71
AC009404.1-202ENST00000439955 HMCN1Q96RW7 5635 aa4.35□□□□□ -1.71
AC009404.1-202ENST00000439955 KRTAP19-5Q3LI72 72 aa4.34□□□□□ -1.71
AC009404.1-202ENST00000439955 KRTAP19-7Q3SYF9 63 aa4.33□□□□□ -1.72
AC009404.1-202ENST00000439955 AHNAK2Q8IVF2 5795 aa4.32□□□□□ -1.72
AC009404.1-202ENST00000439955 MT1EP04732 61 aa4.28□□□□□ -1.72
AC009404.1-202ENST00000439955 MT4P47944 62 aa4.23□□□□□ -1.73
AC009404.1-202ENST00000439955 KRTAP5-10Q6L8G5 202 aa4.23□□□□□ -1.73
AC009404.1-202ENST00000439955 MT1LQ93083 61 aa4.17□□□□□ -1.74
AC009404.1-202ENST00000439955 KRTAP19-3Q7Z4W3 81 aa4.13□□□□□ -1.75
AC009404.1-202ENST00000439955 KRTAP5-7Q6L8G8 165 aa4.12□□□□□ -1.75
AC009404.1-202ENST00000439955 MT1GP13640 62 aa4.11□□□□□ -1.75
AC009404.1-202ENST00000439955 SPRR5A0A1B0GTR4 108 aa4.08□□□□□ -1.76
AC009404.1-202ENST00000439955 KRTAP5-11Q6L8G4 156 aa4.07□□□□□ -1.76
AC009404.1-202ENST00000439955 LCE3CQ5T5A8 94 aa4.06□□□□□ -1.76
AC009404.1-202ENST00000439955 MT1MQ8N339 61 aa4.03□□□□□ -1.76
AC009404.1-202ENST00000439955 KRTAP5-4Q6L8H1 288 aa3.94□□□□□ -1.78
AC009404.1-202ENST00000439955 MT3P25713 68 aa3.9□□□□□ -1.79
AC009404.1-202ENST00000439955 KRTAP4-3Q9BYR4 195 aa3.88□□□□□ -1.79
AC009404.1-202ENST00000439955 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
AC009404.1-202ENST00000439955 KRTAP20-2Q3LI61 65 aa3.79□□□□□ -1.8
AC009404.1-202ENST00000439955 LUZP6Q538Z0 58 aa3.78□□□□□ -1.8
AC009404.1-202ENST00000439955 AHNAKQ09666 5890 aaKnown RBP3.75□□□□□ -1.81
AC009404.1-202ENST00000439955 KRTAP5-1Q6L8H4 278 aa3.74□□□□□ -1.81
AC009404.1-202ENST00000439955 LCE1FQ5T754 118 aa3.71□□□□□ -1.82
AC009404.1-202ENST00000439955 LCE1EQ5T753 118 aa3.69□□□□□ -1.82
AC009404.1-202ENST00000439955 MUC5ACP98088 5654 aa3.68□□□□□ -1.82
AC009404.1-202ENST00000439955 KRTAP4-4Q9BYR3 166 aa3.67□□□□□ -1.82
AC009404.1-202ENST00000439955 KRTAP5-5Q701N2 237 aaPredicted RBP3.66□□□□□ -1.82
AC009404.1-202ENST00000439955 MUC5BQ9HC84 5762 aaPredicted RBP3.61□□□□□ -1.83
AC009404.1-202ENST00000439955 KRTAP12-4P60329 112 aa3.6□□□□□ -1.83
AC009404.1-202ENST00000439955 MT1AP04731 61 aa3.57□□□□□ -1.84
AC009404.1-202ENST00000439955 NDUFAF8A1L188 74 aa3.56□□□□□ -1.84
AC009404.1-202ENST00000439955 SYNE1Q8NF91 8797 aaKnown RBP3.54□□□□□ -1.84
AC009404.1-202ENST00000439955 KRTAP5-8O75690 187 aa3.52□□□□□ -1.85
AC009404.1-202ENST00000439955 KRTAP6-1Q3LI64 71 aa3.49□□□□□ -1.85
AC009404.1-202ENST00000439955 OBSCNQ5VST9 7968 aa3.41□□□□□ -1.86
AC009404.1-202ENST00000439955 KRTAP5-2Q701N4 177 aa3.37□□□□□ -1.87
AC009404.1-202ENST00000439955 KRTAP6-2Q3LI66 62 aa3.23□□□□□ -1.89
AC009404.1-202ENST00000439955 LCE3EQ5T5B0 92 aa3.17□□□□□ -1.9
AC009404.1-202ENST00000439955 LCE3DQ9BYE3 92 aa3.03□□□□□ -1.92
AC009404.1-202ENST00000439955 INE1O15225 51 aa3.01□□□□□ -1.93
AC009404.1-202ENST00000439955 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
AC009404.1-202ENST00000439955 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
AC009404.1-202ENST00000439955 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
AC009404.1-202ENST00000439955 PRM1P04553 51 aa2.49□□□□□ -2.01
AC009404.1-202ENST00000439955 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
AC009404.1-202ENST00000439955 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
AC009404.1-202ENST00000439955 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
AC009404.1-202ENST00000439955 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 66.7 ms