RNA–Protein interactions for RNA: ENST00000439259.1

AC012494.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC012494.1, Length 1,103 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012494.1-201ENST00000439259 K7ERS5 55 aa3.5□□□□□ -1.85
AC012494.1-201ENST00000439259 H0YAA0 97 aa3.49□□□□□ -1.85
AC012494.1-201ENST00000439259 CRIPTQ9P021 101 aa3.49□□□□□ -1.85
AC012494.1-201ENST00000439259 KMT2DO14686 5537 aa3.48□□□□□ -1.85
AC012494.1-201ENST00000439259 KRTAP25-1Q3LHN0 102 aa3.48□□□□□ -1.85
AC012494.1-201ENST00000439259 MDN1Q9NU22 5596 aa3.46□□□□□ -1.85
AC012494.1-201ENST00000439259 KRTAP20-1Q3LI63 56 aa3.46□□□□□ -1.86
AC012494.1-201ENST00000439259 P0C880 135 aa3.45□□□□□ -1.86
AC012494.1-201ENST00000439259 MT1XP80297 61 aa3.41□□□□□ -1.86
AC012494.1-201ENST00000439259 M0QZ58 72 aa3.39□□□□□ -1.87
AC012494.1-201ENST00000439259 ROMO1P60602 79 aa3.39□□□□□ -1.87
AC012494.1-201ENST00000439259 KRTAP13-4Q3LI77 160 aa3.39□□□□□ -1.87
AC012494.1-201ENST00000439259 SPRR2FQ96RM1 72 aa3.39□□□□□ -1.87
AC012494.1-201ENST00000439259 SPRR2EP22531 72 aa3.36□□□□□ -1.87
AC012494.1-201ENST00000439259 SPRR2BP35325 72 aa3.36□□□□□ -1.87
AC012494.1-201ENST00000439259 SPRR2AP35326 72 aa3.36□□□□□ -1.87
AC012494.1-201ENST00000439259 PLAC4Q8WY50 150 aa3.36□□□□□ -1.87
AC012494.1-201ENST00000439259 PRO2289Q9P1D8 64 aa3.36□□□□□ -1.87
AC012494.1-201ENST00000439259 R4GN34 69 aa3.35□□□□□ -1.87
AC012494.1-201ENST00000439259 A0A0D9SG42 100 aa3.34□□□□□ -1.87
AC012494.1-201ENST00000439259 KRTAP2-3P0C7H8 128 aa3.34□□□□□ -1.87
AC012494.1-201ENST00000439259 KRTAP8-1Q8IUC2 63 aa3.34□□□□□ -1.87
AC012494.1-201ENST00000439259 KRTAP2-4Q9BYR9 128 aa3.34□□□□□ -1.87
AC012494.1-201ENST00000439259 LCE3CQ5T5A8 94 aa3.33□□□□□ -1.88
AC012494.1-201ENST00000439259 KRTAP12-2P59991 146 aa3.3□□□□□ -1.88
AC012494.1-201ENST00000439259 KRTAP12-1P59990 96 aa3.28□□□□□ -1.88
AC012494.1-201ENST00000439259 SPINT4Q6UDR6 99 aa3.26□□□□□ -1.89
AC012494.1-201ENST00000439259 CAMK2N1Q7Z7J9 78 aa3.25□□□□□ -1.89
AC012494.1-201ENST00000439259 SPRR2DP22532 72 aa3.24□□□□□ -1.89
AC012494.1-201ENST00000439259 KRTAP2-1Q9BYU5 128 aa3.23□□□□□ -1.89
AC012494.1-201ENST00000439259 OBSCNQ5VST9 7968 aa3.21□□□□□ -1.9
AC012494.1-201ENST00000439259 KRTAP4-3Q9BYR4 195 aa3.17□□□□□ -1.9
AC012494.1-201ENST00000439259 C10orf95Q9H7T3 257 aa3.17□□□□□ -1.9
AC012494.1-201ENST00000439259 LUZP6Q538Z0 58 aa3.16□□□□□ -1.9
AC012494.1-201ENST00000439259 NDUFAF8A1L188 74 aa3.15□□□□□ -1.91
AC012494.1-201ENST00000439259 LCE3AQ5TA76 89 aa3.09□□□□□ -1.91
AC012494.1-201ENST00000439259 KRTAP19-7Q3SYF9 63 aa3.05□□□□□ -1.92
AC012494.1-201ENST00000439259 MT1EP04732 61 aa3.02□□□□□ -1.93
AC012494.1-201ENST00000439259 LCE3EQ5T5B0 92 aa3.02□□□□□ -1.93
AC012494.1-201ENST00000439259 DSTQ03001 7570 aaKnown RBP3.02□□□□□ -1.93
AC012494.1-201ENST00000439259 PP632Q6XCG6 107 aa3.01□□□□□ -1.93
AC012494.1-201ENST00000439259 KRTAP19-3Q7Z4W3 81 aa3.01□□□□□ -1.93
AC012494.1-201ENST00000439259 TNP1P09430 55 aa3□□□□□ -1.93
AC012494.1-201ENST00000439259 KRTAP19-5Q3LI72 72 aa2.96□□□□□ -1.94
AC012494.1-201ENST00000439259 KRTAP5-2Q701N4 177 aa2.94□□□□□ -1.94
AC012494.1-201ENST00000439259 GPR98Q8WXG9 6306 aa2.91□□□□□ -1.94
AC012494.1-201ENST00000439259 MT1GP13640 62 aa2.91□□□□□ -1.94
AC012494.1-201ENST00000439259 MT1MQ8N339 61 aa2.89□□□□□ -1.95
AC012494.1-201ENST00000439259 MT1LQ93083 61 aa2.88□□□□□ -1.95
AC012494.1-201ENST00000439259 MT4P47944 62 aa2.87□□□□□ -1.95
AC012494.1-201ENST00000439259 HMCN1Q96RW7 5635 aa2.83□□□□□ -1.96
AC012494.1-201ENST00000439259 KRTAP5-5Q701N2 237 aaPredicted RBP2.83□□□□□ -1.96
AC012494.1-201ENST00000439259 SPRR5A0A1B0GTR4 108 aa2.79□□□□□ -1.96
AC012494.1-201ENST00000439259 KRTAP12-3P60328 96 aa2.74□□□□□ -1.97
AC012494.1-201ENST00000439259 AHNAK2Q8IVF2 5795 aa2.73□□□□□ -1.97
AC012494.1-201ENST00000439259 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
AC012494.1-201ENST00000439259 LCE1BQ5T7P3 118 aa2.73□□□□□ -1.97
AC012494.1-201ENST00000439259 KRTAP5-10Q6L8G5 202 aa2.72□□□□□ -1.97
AC012494.1-201ENST00000439259 KRTAP20-2Q3LI61 65 aa2.64□□□□□ -1.99
AC012494.1-201ENST00000439259 INE1O15225 51 aa2.61□□□□□ -1.99
AC012494.1-201ENST00000439259 KRTAP5-7Q6L8G8 165 aa2.6□□□□□ -1.99
AC012494.1-201ENST00000439259 SYNE1Q8NF91 8797 aaKnown RBP2.58□□□□□ -2
AC012494.1-201ENST00000439259 KRTAP12-4P60329 112 aa2.57□□□□□ -2
AC012494.1-201ENST00000439259 KRTAP5-8O75690 187 aa2.47□□□□□ -2.01
AC012494.1-201ENST00000439259 KRTAP6-1Q3LI64 71 aa2.45□□□□□ -2.02
AC012494.1-201ENST00000439259 MT1AP04731 61 aa2.43□□□□□ -2.02
AC012494.1-201ENST00000439259 LCE3DQ9BYE3 92 aa2.37□□□□□ -2.03
AC012494.1-201ENST00000439259 KRTAP6-2Q3LI66 62 aa2.36□□□□□ -2.03
AC012494.1-201ENST00000439259 MUC5BQ9HC84 5762 aaPredicted RBP2.26□□□□□ -2.05
AC012494.1-201ENST00000439259 MUC5ACP98088 5654 aa2.25□□□□□ -2.05
AC012494.1-201ENST00000439259 AHNAKQ09666 5890 aaKnown RBP2.23□□□□□ -2.05
AC012494.1-201ENST00000439259 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
AC012494.1-201ENST00000439259 KRTAP21-2Q3LI59 83 aa1.93□□□□□ -2.1
AC012494.1-201ENST00000439259 PRM1P04553 51 aa1.77□□□□□ -2.13
AC012494.1-201ENST00000439259 PHGR1C9JFL3 82 aa1.59□□□□□ -2.15
AC012494.1-201ENST00000439259 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
AC012494.1-201ENST00000439259 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 102.3 ms