RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 MT4P47944 62 aa5.01□□□□□ -1.61
NEDD4-202ENST00000435532 RNF213Q63HN8 5207 aa4.99□□□□□ -1.61
NEDD4-202ENST00000435532 LCE3EQ5T5B0 92 aa4.97□□□□□ -1.61
NEDD4-202ENST00000435532 KRTAP20-1Q3LI63 56 aa4.96□□□□□ -1.61
NEDD4-202ENST00000435532 SPRR5A0A1B0GTR4 108 aa4.95□□□□□ -1.62
NEDD4-202ENST00000435532 MT3P25713 68 aa4.95□□□□□ -1.62
NEDD4-202ENST00000435532 KRTAP9-7A8MTY7 169 aa4.94□□□□□ -1.62
NEDD4-202ENST00000435532 KRTAP4-7Q9BYR0 210 aa4.92□□□□□ -1.62
NEDD4-202ENST00000435532 KRTAP6-3Q3LI67 103 aa4.88□□□□□ -1.63
NEDD4-202ENST00000435532 FAT4Q6V0I7 4981 aa4.82□□□□□ -1.64
NEDD4-202ENST00000435532 HMCN2Q8NDA2 5059 aa4.8□□□□□ -1.64
NEDD4-202ENST00000435532 LCE1AQ5T7P2 110 aa4.77□□□□□ -1.65
NEDD4-202ENST00000435532 KRTAP2-3P0C7H8 128 aa4.77□□□□□ -1.65
NEDD4-202ENST00000435532 KRTAP2-4Q9BYR9 128 aa4.77□□□□□ -1.65
NEDD4-202ENST00000435532 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.73□□□□□ -1.65
NEDD4-202ENST00000435532 FSIP2Q5CZC0 6907 aa4.7□□□□□ -1.66
NEDD4-202ENST00000435532 KRTAP4-3Q9BYR4 195 aa4.69□□□□□ -1.66
NEDD4-202ENST00000435532 KRTAP19-7Q3SYF9 63 aa4.69□□□□□ -1.66
NEDD4-202ENST00000435532 MT1AP04731 61 aa4.69□□□□□ -1.66
NEDD4-202ENST00000435532 LOC100996750A0A140TA64 210 aa4.68□□□□□ -1.66
NEDD4-202ENST00000435532 LCE1DQ5T752 114 aa4.63□□□□□ -1.67
NEDD4-202ENST00000435532 LCE1BQ5T7P3 118 aa4.62□□□□□ -1.67
NEDD4-202ENST00000435532 LCE4AQ5TA78 99 aa4.59□□□□□ -1.67
NEDD4-202ENST00000435532 KRTAP2-2Q9BYT5 123 aa4.58□□□□□ -1.68
NEDD4-202ENST00000435532 KRTAP2-1Q9BYU5 128 aa4.58□□□□□ -1.68
NEDD4-202ENST00000435532 SYNE2Q8WXH0 6885 aaKnown RBP4.55□□□□□ -1.68
NEDD4-202ENST00000435532 LCE5AQ5TCM9 118 aa4.43□□□□□ -1.7
NEDD4-202ENST00000435532 MUC2Q02817 5179 aa4.42□□□□□ -1.7
NEDD4-202ENST00000435532 PRM1P04553 51 aa4.38□□□□□ -1.71
NEDD4-202ENST00000435532 KRTAP4-9Q9BYQ8 210 aa4.35□□□□□ -1.71
NEDD4-202ENST00000435532 KRTAP9-4Q9BYQ2 154 aa4.35□□□□□ -1.71
NEDD4-202ENST00000435532 SYNE1Q8NF91 8797 aaKnown RBP4.33□□□□□ -1.72
NEDD4-202ENST00000435532 KRTAP6-1Q3LI64 71 aa4.28□□□□□ -1.72
NEDD4-202ENST00000435532 KRTAP6-2Q3LI66 62 aa4.28□□□□□ -1.72
NEDD4-202ENST00000435532 USH2AO75445 5202 aa4.12□□□□□ -1.75
NEDD4-202ENST00000435532 NEBP20929 6669 aa4.08□□□□□ -1.76
NEDD4-202ENST00000435532 KRTAP5-9P26371 169 aa4.07□□□□□ -1.76
NEDD4-202ENST00000435532 SSPOA2VEC9 5147 aa4.02□□□□□ -1.77
NEDD4-202ENST00000435532 KRTAP9-6A8MVA2 160 aa4.01□□□□□ -1.77
NEDD4-202ENST00000435532 LCE1CQ5T751 118 aa4□□□□□ -1.77
NEDD4-202ENST00000435532 LCE1EQ5T753 118 aa4□□□□□ -1.77
NEDD4-202ENST00000435532 LCE1FQ5T754 118 aa4□□□□□ -1.77
NEDD4-202ENST00000435532 MACF1Q9UPN3 7388 aaKnown RBP4□□□□□ -1.77
NEDD4-202ENST00000435532 KRTAP9-9Q9BYP9 154 aa3.98□□□□□ -1.77
NEDD4-202ENST00000435532 GPR98Q8WXG9 6306 aa3.94□□□□□ -1.78
NEDD4-202ENST00000435532 KMT2DO14686 5537 aa3.91□□□□□ -1.78
NEDD4-202ENST00000435532 FCGBPQ9Y6R7 5405 aaPredicted RBP3.9□□□□□ -1.79
NEDD4-202ENST00000435532 OBSCNQ5VST9 7968 aa3.83□□□□□ -1.8
NEDD4-202ENST00000435532 KRTAP20-2Q3LI61 65 aa3.74□□□□□ -1.81
NEDD4-202ENST00000435532 MDN1Q9NU22 5596 aa3.73□□□□□ -1.81
NEDD4-202ENST00000435532 KRTAP4-6Q9BYQ5 205 aa3.7□□□□□ -1.82
NEDD4-202ENST00000435532 DSTQ03001 7570 aaKnown RBP3.68□□□□□ -1.82
NEDD4-202ENST00000435532 KRTAP5-4Q6L8H1 288 aa3.61□□□□□ -1.83
NEDD4-202ENST00000435532 KRTAP4-11Q9BYQ6 195 aa3.38□□□□□ -1.87
NEDD4-202ENST00000435532 MUC12Q9UKN1 5478 aa3.37□□□□□ -1.87
NEDD4-202ENST00000435532 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
NEDD4-202ENST00000435532 KRTAP5-5Q701N2 237 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-202ENST00000435532 KRTAP4-12Q9BQ66 201 aa3.2□□□□□ -1.9
NEDD4-202ENST00000435532 KRTAP4-2Q9BYR5 136 aa3.2□□□□□ -1.9
NEDD4-202ENST00000435532 KRTAP5-3Q6L8H2 238 aa3.19□□□□□ -1.9
NEDD4-202ENST00000435532 HMCN1Q96RW7 5635 aa3.11□□□□□ -1.91
NEDD4-202ENST00000435532 KRTAP4-4Q9BYR3 166 aa3.11□□□□□ -1.91
NEDD4-202ENST00000435532 MUC19Q7Z5P9 8384 aa3.02□□□□□ -1.93
NEDD4-202ENST00000435532 MUC5ACP98088 5654 aa2.84□□□□□ -1.95
NEDD4-202ENST00000435532 KRTAP5-8O75690 187 aa2.83□□□□□ -1.96
NEDD4-202ENST00000435532 AHNAKQ09666 5890 aaKnown RBP2.77□□□□□ -1.97
NEDD4-202ENST00000435532 KRTAP5-2Q701N4 177 aa2.74□□□□□ -1.97
NEDD4-202ENST00000435532 PHGR1C9JFL3 82 aa2.6□□□□□ -1.99
NEDD4-202ENST00000435532 KRTAP5-7Q6L8G8 165 aa2.58□□□□□ -2
NEDD4-202ENST00000435532 KRTAP5-10Q6L8G5 202 aa2.55□□□□□ -2
NEDD4-202ENST00000435532 MUC5BQ9HC84 5762 aaPredicted RBP2.48□□□□□ -2.01
NEDD4-202ENST00000435532 KRTAP5-11Q6L8G4 156 aa2.46□□□□□ -2.02
NEDD4-202ENST00000435532 KRTAP5-1Q6L8H4 278 aa2.38□□□□□ -2.03
NEDD4-202ENST00000435532 KRTAP21-2Q3LI59 83 aa2.18□□□□□ -2.06
NEDD4-202ENST00000435532 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.16□□□□□ -2.06
NEDD4-202ENST00000435532 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
NEDD4-202ENST00000435532 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 8.3 ms