RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 RPS28P62857 69 aaKnown RBP6.5□□□□□ -1.37
HERC3-205ENST00000426683 A6NED7 52 aa6.47□□□□□ -1.37
HERC3-205ENST00000426683 MT1GP13640 62 aa6.46□□□□□ -1.38
HERC3-205ENST00000426683 MT1LQ93083 61 aa6.43□□□□□ -1.38
HERC3-205ENST00000426683 PP632Q6XCG6 107 aa6.42□□□□□ -1.38
HERC3-205ENST00000426683 KRTAP25-1Q3LHN0 102 aa6.41□□□□□ -1.38
HERC3-205ENST00000426683 MT1MQ8N339 61 aa6.37□□□□□ -1.39
HERC3-205ENST00000426683 DSTQ03001 7570 aaKnown RBP6.35□□□□□ -1.39
HERC3-205ENST00000426683 KRTAP12-3P60328 96 aa6.34□□□□□ -1.39
HERC3-205ENST00000426683 CDC42SE1Q9NRR8 79 aa6.22□□□□□ -1.41
HERC3-205ENST00000426683 KRTAP4-3Q9BYR4 195 aa6.21□□□□□ -1.42
HERC3-205ENST00000426683 KRTAP23-1A1A580 65 aa6.17□□□□□ -1.42
HERC3-205ENST00000426683 KRTAP4-7Q9BYR0 210 aa6.14□□□□□ -1.43
HERC3-205ENST00000426683 ROMO1P60602 79 aa6.13□□□□□ -1.43
HERC3-205ENST00000426683 KRTAP4-9Q9BYQ8 210 aa6.1□□□□□ -1.43
HERC3-205ENST00000426683 LCE4AQ5TA78 99 aa6.02□□□□□ -1.45
HERC3-205ENST00000426683 KRTAP15-1Q3LI76 137 aa5.99□□□□□ -1.45
HERC3-205ENST00000426683 KRTAP19-4Q3LI73 84 aa5.97□□□□□ -1.45
HERC3-205ENST00000426683 LCE1DQ5T752 114 aa5.97□□□□□ -1.45
HERC3-205ENST00000426683 MT4P47944 62 aa5.95□□□□□ -1.46
HERC3-205ENST00000426683 KRTAP5-4Q6L8H1 288 aa5.94□□□□□ -1.46
HERC3-205ENST00000426683 LCE3CQ5T5A8 94 aa5.86□□□□□ -1.47
HERC3-205ENST00000426683 HMCN1Q96RW7 5635 aa5.86□□□□□ -1.47
HERC3-205ENST00000426683 LOC100996750A0A140TA64 210 aa5.81□□□□□ -1.48
HERC3-205ENST00000426683 KRTAP5-5Q701N2 237 aaPredicted RBP5.8□□□□□ -1.48
HERC3-205ENST00000426683 KRTAP4-6Q9BYQ5 205 aa5.79□□□□□ -1.48
HERC3-205ENST00000426683 GPR98Q8WXG9 6306 aa5.77□□□□□ -1.49
HERC3-205ENST00000426683 BRK1Q8WUW1 75 aa5.76□□□□□ -1.49
HERC3-205ENST00000426683 KRTAP12-4P60329 112 aa5.61□□□□□ -1.51
HERC3-205ENST00000426683 KRTAP20-2Q3LI61 65 aa5.6□□□□□ -1.51
HERC3-205ENST00000426683 AHNAK2Q8IVF2 5795 aa5.59□□□□□ -1.51
HERC3-205ENST00000426683 SPRR5A0A1B0GTR4 108 aa5.59□□□□□ -1.51
HERC3-205ENST00000426683 SYNE1Q8NF91 8797 aaKnown RBP5.59□□□□□ -1.51
HERC3-205ENST00000426683 KRTAP9-6A8MVA2 160 aa5.52□□□□□ -1.53
HERC3-205ENST00000426683 MT1AP04731 61 aa5.48□□□□□ -1.53
HERC3-205ENST00000426683 KRTAP6-1Q3LI64 71 aa5.43□□□□□ -1.54
HERC3-205ENST00000426683 KRTAP5-10Q6L8G5 202 aa5.43□□□□□ -1.54
HERC3-205ENST00000426683 KRTAP5-3Q6L8H2 238 aa5.42□□□□□ -1.54
HERC3-205ENST00000426683 PMAIP1Q13794 54 aa5.41□□□□□ -1.54
HERC3-205ENST00000426683 KRTAP9-4Q9BYQ2 154 aa5.27□□□□□ -1.57
HERC3-205ENST00000426683 KRTAP5-2Q701N4 177 aa5.24□□□□□ -1.57
HERC3-205ENST00000426683 KRTAP5-7Q6L8G8 165 aa5.2□□□□□ -1.58
HERC3-205ENST00000426683 PRAC1Q96KF2 57 aa5.19□□□□□ -1.58
HERC3-205ENST00000426683 KRTAP6-2Q3LI66 62 aa5.16□□□□□ -1.58
HERC3-205ENST00000426683 PRO0628Q9UI54 55 aa5.14□□□□□ -1.59
HERC3-205ENST00000426683 KRTAP4-11Q9BYQ6 195 aa5.06□□□□□ -1.6
HERC3-205ENST00000426683 MT3P25713 68 aa5□□□□□ -1.61
HERC3-205ENST00000426683 KRTAP5-8O75690 187 aa4.89□□□□□ -1.63
HERC3-205ENST00000426683 KTN1-AS1Q86SY8 53 aa4.89□□□□□ -1.63
HERC3-205ENST00000426683 OBSCNQ5VST9 7968 aa4.82□□□□□ -1.64
HERC3-205ENST00000426683 SVIPQ8NHG7 77 aa4.7□□□□□ -1.66
HERC3-205ENST00000426683 KRTAP5-1Q6L8H4 278 aa4.66□□□□□ -1.66
HERC3-205ENST00000426683 KRTAP9-9Q9BYP9 154 aa4.6□□□□□ -1.67
HERC3-205ENST00000426683 MUC5ACP98088 5654 aa4.56□□□□□ -1.68
HERC3-205ENST00000426683 MUC5BQ9HC84 5762 aaPredicted RBP4.55□□□□□ -1.68
HERC3-205ENST00000426683 AHNAKQ09666 5890 aaKnown RBP4.55□□□□□ -1.68
HERC3-205ENST00000426683 LCE1EQ5T753 118 aa4.53□□□□□ -1.68
HERC3-205ENST00000426683 LUZP6Q538Z0 58 aa4.35□□□□□ -1.71
HERC3-205ENST00000426683 LCE1BQ5T7P3 118 aa4.28□□□□□ -1.72
HERC3-205ENST00000426683 KRTAP4-2Q9BYR5 136 aa4.27□□□□□ -1.73
HERC3-205ENST00000426683 LCE3DQ9BYE3 92 aa4.26□□□□□ -1.73
HERC3-205ENST00000426683 LCE1CQ5T751 118 aa4.21□□□□□ -1.74
HERC3-205ENST00000426683 LCE3EQ5T5B0 92 aa4.04□□□□□ -1.76
HERC3-205ENST00000426683 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.85□□□□□ -1.79
HERC3-205ENST00000426683 KRTAP4-12Q9BQ66 201 aa3.81□□□□□ -1.8
HERC3-205ENST00000426683 KRTAP5-11Q6L8G4 156 aa3.79□□□□□ -1.8
HERC3-205ENST00000426683 NDUFAF8A1L188 74 aa3.64□□□□□ -1.83
HERC3-205ENST00000426683 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
HERC3-205ENST00000426683 KRTAP21-2Q3LI59 83 aa3.57□□□□□ -1.84
HERC3-205ENST00000426683 PHGR1C9JFL3 82 aa3.27□□□□□ -1.89
HERC3-205ENST00000426683 KRTAP4-4Q9BYR3 166 aa3.26□□□□□ -1.89
HERC3-205ENST00000426683 H3BS24 57 aa3.25□□□□□ -1.89
HERC3-205ENST00000426683 A0A0A0MQY5 61 aa3.24□□□□□ -1.89
HERC3-205ENST00000426683 PRM1P04553 51 aa3.16□□□□□ -1.9
HERC3-205ENST00000426683 MUC19Q7Z5P9 8384 aa2.95□□□□□ -1.94
HERC3-205ENST00000426683 INE1O15225 51 aa2.93□□□□□ -1.94
HERC3-205ENST00000426683 KRTAP21-1Q3LI58 79 aa2.39□□□□□ -2.03
HERC3-205ENST00000426683 MUC16Q8WXI7 14507 aa2.1□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 10.9 ms