RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 MT1EP04732 61 aa5.48□□□□□ -1.53
TMEM248-204ENST00000424964 SPRR2DP22532 72 aa5.48□□□□□ -1.53
TMEM248-204ENST00000424964 KRTAP2-3P0C7H8 128 aa5.45□□□□□ -1.54
TMEM248-204ENST00000424964 KRTAP2-4Q9BYR9 128 aa5.45□□□□□ -1.54
TMEM248-204ENST00000424964 KRTAP25-1Q3LHN0 102 aa5.44□□□□□ -1.54
TMEM248-204ENST00000424964 CDC42SE1Q9NRR8 79 aa5.44□□□□□ -1.54
TMEM248-204ENST00000424964 LCE3BQ5TA77 95 aa5.4□□□□□ -1.54
TMEM248-204ENST00000424964 KRTAP19-3Q7Z4W3 81 aa5.39□□□□□ -1.55
TMEM248-204ENST00000424964 LCE5AQ5TCM9 118 aa5.35□□□□□ -1.55
TMEM248-204ENST00000424964 KRTAP9-9Q9BYP9 154 aa5.34□□□□□ -1.55
TMEM248-204ENST00000424964 KRTAP9-4Q9BYQ2 154 aa5.34□□□□□ -1.55
TMEM248-204ENST00000424964 MT1GP13640 62 aa5.3□□□□□ -1.56
TMEM248-204ENST00000424964 KRTAP12-3P60328 96 aa5.3□□□□□ -1.56
TMEM248-204ENST00000424964 ROMO1P60602 79 aa5.3□□□□□ -1.56
TMEM248-204ENST00000424964 MT1LQ93083 61 aa5.29□□□□□ -1.56
TMEM248-204ENST00000424964 KRTAP2-2Q9BYT5 123 aa5.29□□□□□ -1.56
TMEM248-204ENST00000424964 KRTAP2-1Q9BYU5 128 aa5.29□□□□□ -1.56
TMEM248-204ENST00000424964 PP632Q6XCG6 107 aa5.26□□□□□ -1.57
TMEM248-204ENST00000424964 MT1MQ8N339 61 aa5.2□□□□□ -1.58
TMEM248-204ENST00000424964 BRK1Q8WUW1 75 aa5.17□□□□□ -1.58
TMEM248-204ENST00000424964 DSTQ03001 7570 aaKnown RBP5.11□□□□□ -1.59
TMEM248-204ENST00000424964 KRTAP19-4Q3LI73 84 aa5.09□□□□□ -1.59
TMEM248-204ENST00000424964 KRTAP4-3Q9BYR4 195 aa5.09□□□□□ -1.59
TMEM248-204ENST00000424964 LCE1DQ5T752 114 aa5.07□□□□□ -1.6
TMEM248-204ENST00000424964 KRTAP4-7Q9BYR0 210 aa5.06□□□□□ -1.6
TMEM248-204ENST00000424964 KRTAP15-1Q3LI76 137 aa5.04□□□□□ -1.6
TMEM248-204ENST00000424964 LCE4AQ5TA78 99 aa5.01□□□□□ -1.61
TMEM248-204ENST00000424964 KRTAP4-9Q9BYQ8 210 aa4.94□□□□□ -1.62
TMEM248-204ENST00000424964 LCE3CQ5T5A8 94 aa4.9□□□□□ -1.63
TMEM248-204ENST00000424964 PMAIP1Q13794 54 aa4.87□□□□□ -1.63
TMEM248-204ENST00000424964 KRTAP4-2Q9BYR5 136 aa4.83□□□□□ -1.64
TMEM248-204ENST00000424964 MT4P47944 62 aa4.78□□□□□ -1.64
TMEM248-204ENST00000424964 KRTAP5-4Q6L8H1 288 aa4.78□□□□□ -1.64
TMEM248-204ENST00000424964 KRTAP4-11Q9BYQ6 195 aa4.76□□□□□ -1.65
TMEM248-204ENST00000424964 KRTAP5-5Q701N2 237 aaPredicted RBP4.72□□□□□ -1.65
TMEM248-204ENST00000424964 PRO0628Q9UI54 55 aa4.71□□□□□ -1.66
TMEM248-204ENST00000424964 PRAC1Q96KF2 57 aa4.62□□□□□ -1.67
TMEM248-204ENST00000424964 KRTAP9-6A8MVA2 160 aa4.59□□□□□ -1.67
TMEM248-204ENST00000424964 KRTAP12-4P60329 112 aa4.58□□□□□ -1.68
TMEM248-204ENST00000424964 HMCN1Q96RW7 5635 aa4.57□□□□□ -1.68
TMEM248-204ENST00000424964 SPRR5A0A1B0GTR4 108 aa4.51□□□□□ -1.69
TMEM248-204ENST00000424964 MT1AP04731 61 aa4.51□□□□□ -1.69
TMEM248-204ENST00000424964 KRTAP20-2Q3LI61 65 aa4.51□□□□□ -1.69
TMEM248-204ENST00000424964 SYNE1Q8NF91 8797 aaKnown RBP4.48□□□□□ -1.69
TMEM248-204ENST00000424964 KRTAP6-1Q3LI64 71 aa4.46□□□□□ -1.7
TMEM248-204ENST00000424964 KTN1-AS1Q86SY8 53 aa4.44□□□□□ -1.7
TMEM248-204ENST00000424964 KRTAP5-3Q6L8H2 238 aa4.35□□□□□ -1.71
TMEM248-204ENST00000424964 GPR98Q8WXG9 6306 aa4.35□□□□□ -1.71
TMEM248-204ENST00000424964 AHNAK2Q8IVF2 5795 aa4.32□□□□□ -1.72
TMEM248-204ENST00000424964 KRTAP5-10Q6L8G5 202 aa4.27□□□□□ -1.73
TMEM248-204ENST00000424964 KRTAP5-2Q701N4 177 aa4.23□□□□□ -1.73
TMEM248-204ENST00000424964 KRTAP6-2Q3LI66 62 aa4.22□□□□□ -1.73
TMEM248-204ENST00000424964 NDUFAF8A1L188 74 aa4.13□□□□□ -1.75
TMEM248-204ENST00000424964 MT3P25713 68 aa4.12□□□□□ -1.75
TMEM248-204ENST00000424964 KRTAP5-7Q6L8G8 165 aa4.07□□□□□ -1.76
TMEM248-204ENST00000424964 OBSCNQ5VST9 7968 aa3.9□□□□□ -1.78
TMEM248-204ENST00000424964 KRTAP5-8O75690 187 aa3.9□□□□□ -1.79
TMEM248-204ENST00000424964 LUZP6Q538Z0 58 aa3.89□□□□□ -1.79
TMEM248-204ENST00000424964 KRTAP5-1Q6L8H4 278 aa3.75□□□□□ -1.81
TMEM248-204ENST00000424964 LCE1EQ5T753 118 aa3.7□□□□□ -1.82
TMEM248-204ENST00000424964 LCE3DQ9BYE3 92 aa3.6□□□□□ -1.83
TMEM248-204ENST00000424964 MUC5ACP98088 5654 aa3.57□□□□□ -1.84
TMEM248-204ENST00000424964 LCE1BQ5T7P3 118 aa3.51□□□□□ -1.85
TMEM248-204ENST00000424964 MUC5BQ9HC84 5762 aaPredicted RBP3.48□□□□□ -1.85
TMEM248-204ENST00000424964 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
TMEM248-204ENST00000424964 LCE3EQ5T5B0 92 aa3.43□□□□□ -1.86
TMEM248-204ENST00000424964 LCE1CQ5T751 118 aa3.43□□□□□ -1.86
TMEM248-204ENST00000424964 AHNAKQ09666 5890 aaKnown RBP3.41□□□□□ -1.86
TMEM248-204ENST00000424964 KRTAP5-11Q6L8G4 156 aa3.24□□□□□ -1.89
TMEM248-204ENST00000424964 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.22□□□□□ -1.89
TMEM248-204ENST00000424964 KRTAP21-2Q3LI59 83 aa2.92□□□□□ -1.94
TMEM248-204ENST00000424964 INE1O15225 51 aa2.73□□□□□ -1.97
TMEM248-204ENST00000424964 PRM1P04553 51 aa2.73□□□□□ -1.97
TMEM248-204ENST00000424964 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
TMEM248-204ENST00000424964 PHGR1C9JFL3 82 aa2.65□□□□□ -1.99
TMEM248-204ENST00000424964 MUC19Q7Z5P9 8384 aa2.38□□□□□ -2.03
TMEM248-204ENST00000424964 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
TMEM248-204ENST00000424964 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 133.3 ms