RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 MT1MQ8N339 61 aa5.76□□□□□ -1.49
COL18A1-205ENST00000423214 RPS28P62857 69 aaKnown RBP5.74□□□□□ -1.49
COL18A1-205ENST00000423214 MT1LQ93083 61 aa5.72□□□□□ -1.49
COL18A1-205ENST00000423214 C10orf95Q9H7T3 257 aa5.71□□□□□ -1.5
COL18A1-205ENST00000423214 UQCR11O14957 56 aa5.67□□□□□ -1.5
COL18A1-205ENST00000423214 AHNAK2Q8IVF2 5795 aa5.67□□□□□ -1.5
COL18A1-205ENST00000423214 V9GYY9 64 aa5.66□□□□□ -1.5
COL18A1-205ENST00000423214 TNP1P09430 55 aa5.65□□□□□ -1.5
COL18A1-205ENST00000423214 LCE3AQ5TA76 89 aa5.64□□□□□ -1.51
COL18A1-205ENST00000423214 KRTAP4-3Q9BYR4 195 aa5.62□□□□□ -1.51
COL18A1-205ENST00000423214 KRTAP5-4Q6L8H1 288 aa5.61□□□□□ -1.51
COL18A1-205ENST00000423214 PSPHP1O15172 72 aa5.6□□□□□ -1.51
COL18A1-205ENST00000423214 Q1T7F1 81 aa5.58□□□□□ -1.52
COL18A1-205ENST00000423214 KRTAP4-6Q9BYQ5 205 aa5.55□□□□□ -1.52
COL18A1-205ENST00000423214 MIR22HGQ0VDD5 57 aa5.54□□□□□ -1.52
COL18A1-205ENST00000423214 KRTAP5-10Q6L8G5 202 aa5.54□□□□□ -1.52
COL18A1-205ENST00000423214 K7ERS5 55 aa5.53□□□□□ -1.52
COL18A1-205ENST00000423214 KRTAP12-3P60328 96 aa5.41□□□□□ -1.54
COL18A1-205ENST00000423214 KRTAP4-7Q9BYR0 210 aa5.41□□□□□ -1.54
COL18A1-205ENST00000423214 A6NED7 52 aa5.4□□□□□ -1.54
COL18A1-205ENST00000423214 KRTAP5-7Q6L8G8 165 aa5.37□□□□□ -1.55
COL18A1-205ENST00000423214 KRTAP5-3Q6L8H2 238 aa5.37□□□□□ -1.55
COL18A1-205ENST00000423214 KRTAP20-2Q3LI61 65 aa5.34□□□□□ -1.55
COL18A1-205ENST00000423214 KRTAP25-1Q3LHN0 102 aa5.31□□□□□ -1.56
COL18A1-205ENST00000423214 SPRR5A0A1B0GTR4 108 aa5.28□□□□□ -1.56
COL18A1-205ENST00000423214 KRTAP5-5Q701N2 237 aaPredicted RBP5.28□□□□□ -1.56
COL18A1-205ENST00000423214 KRTAP12-4P60329 112 aa5.26□□□□□ -1.57
COL18A1-205ENST00000423214 CDC42SE1Q9NRR8 79 aa5.2□□□□□ -1.58
COL18A1-205ENST00000423214 LOC100996750A0A140TA64 210 aa5.15□□□□□ -1.59
COL18A1-205ENST00000423214 KRTAP19-4Q3LI73 84 aa5.14□□□□□ -1.59
COL18A1-205ENST00000423214 BRK1Q8WUW1 75 aa5.11□□□□□ -1.59
COL18A1-205ENST00000423214 KRTAP23-1A1A580 65 aa5.1□□□□□ -1.59
COL18A1-205ENST00000423214 SYNE1Q8NF91 8797 aaKnown RBP5.07□□□□□ -1.6
COL18A1-205ENST00000423214 ROMO1P60602 79 aa5.07□□□□□ -1.6
COL18A1-205ENST00000423214 KRTAP15-1Q3LI76 137 aa5.05□□□□□ -1.6
COL18A1-205ENST00000423214 LCE3CQ5T5A8 94 aa4.98□□□□□ -1.61
COL18A1-205ENST00000423214 KRTAP4-11Q9BYQ6 195 aa4.92□□□□□ -1.62
COL18A1-205ENST00000423214 PRO0628Q9UI54 55 aa4.92□□□□□ -1.62
COL18A1-205ENST00000423214 MT1AP04731 61 aa4.87□□□□□ -1.63
COL18A1-205ENST00000423214 KRTAP5-2Q701N4 177 aa4.87□□□□□ -1.63
COL18A1-205ENST00000423214 PMAIP1Q13794 54 aa4.85□□□□□ -1.63
COL18A1-205ENST00000423214 KRTAP6-1Q3LI64 71 aa4.85□□□□□ -1.63
COL18A1-205ENST00000423214 KRTAP5-8O75690 187 aa4.75□□□□□ -1.65
COL18A1-205ENST00000423214 KRTAP9-6A8MVA2 160 aa4.72□□□□□ -1.65
COL18A1-205ENST00000423214 MUC5ACP98088 5654 aa4.71□□□□□ -1.66
COL18A1-205ENST00000423214 KRTAP9-4Q9BYQ2 154 aa4.71□□□□□ -1.66
COL18A1-205ENST00000423214 AHNAKQ09666 5890 aaKnown RBP4.69□□□□□ -1.66
COL18A1-205ENST00000423214 KRTAP6-2Q3LI66 62 aa4.68□□□□□ -1.66
COL18A1-205ENST00000423214 OBSCNQ5VST9 7968 aa4.68□□□□□ -1.66
COL18A1-205ENST00000423214 MUC5BQ9HC84 5762 aaPredicted RBP4.67□□□□□ -1.66
COL18A1-205ENST00000423214 KRTAP9-9Q9BYP9 154 aa4.59□□□□□ -1.67
COL18A1-205ENST00000423214 KTN1-AS1Q86SY8 53 aa4.57□□□□□ -1.68
COL18A1-205ENST00000423214 PRAC1Q96KF2 57 aa4.5□□□□□ -1.69
COL18A1-205ENST00000423214 MT3P25713 68 aa4.48□□□□□ -1.69
COL18A1-205ENST00000423214 KRTAP5-1Q6L8H4 278 aa4.41□□□□□ -1.7
COL18A1-205ENST00000423214 SVIPQ8NHG7 77 aa4.32□□□□□ -1.72
COL18A1-205ENST00000423214 LCE1EQ5T753 118 aa4.14□□□□□ -1.75
COL18A1-205ENST00000423214 LCE1BQ5T7P3 118 aa3.96□□□□□ -1.78
COL18A1-205ENST00000423214 KRTAP4-2Q9BYR5 136 aa3.93□□□□□ -1.78
COL18A1-205ENST00000423214 LCE1CQ5T751 118 aa3.85□□□□□ -1.79
COL18A1-205ENST00000423214 LUZP6Q538Z0 58 aa3.8□□□□□ -1.8
COL18A1-205ENST00000423214 KRTAP4-12Q9BQ66 201 aa3.67□□□□□ -1.82
COL18A1-205ENST00000423214 LCE3DQ9BYE3 92 aa3.59□□□□□ -1.83
COL18A1-205ENST00000423214 KRTAP5-11Q6L8G4 156 aa3.53□□□□□ -1.84
COL18A1-205ENST00000423214 NDUFAF8A1L188 74 aa3.49□□□□□ -1.85
COL18A1-205ENST00000423214 LCE1FQ5T754 118 aa3.47□□□□□ -1.85
COL18A1-205ENST00000423214 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.46□□□□□ -1.86
COL18A1-205ENST00000423214 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
COL18A1-205ENST00000423214 PHGR1C9JFL3 82 aa3.28□□□□□ -1.88
COL18A1-205ENST00000423214 KRTAP21-2Q3LI59 83 aa3.17□□□□□ -1.9
COL18A1-205ENST00000423214 A0A0A0MQY5 61 aa3.08□□□□□ -1.92
COL18A1-205ENST00000423214 KRTAP4-4Q9BYR3 166 aa2.97□□□□□ -1.93
COL18A1-205ENST00000423214 INE1O15225 51 aa2.94□□□□□ -1.94
COL18A1-205ENST00000423214 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
COL18A1-205ENST00000423214 H3BS24 57 aa2.7□□□□□ -1.98
COL18A1-205ENST00000423214 PRM1P04553 51 aa2.64□□□□□ -1.99
COL18A1-205ENST00000423214 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
COL18A1-205ENST00000423214 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 112.8 ms