RNA–Protein interactions for RNA: ENST00000422109.6

CTCFL-203, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-203ENST00000422109 LOC100996750A0A140TA64 210 aa4.65□□□□□ -1.66
CTCFL-203ENST00000422109 CRCT1Q9UGL9 99 aa4.65□□□□□ -1.66
CTCFL-203ENST00000422109 DSTQ03001 7570 aaKnown RBP4.63□□□□□ -1.67
CTCFL-203ENST00000422109 KRTAP19-6Q3LI70 58 aa4.61□□□□□ -1.67
CTCFL-203ENST00000422109 MT1GP13640 62 aa4.58□□□□□ -1.68
CTCFL-203ENST00000422109 KRTAP2-3P0C7H8 128 aa4.57□□□□□ -1.68
CTCFL-203ENST00000422109 KRTAP2-4Q9BYR9 128 aa4.57□□□□□ -1.68
CTCFL-203ENST00000422109 KRTAP2-1Q9BYU5 128 aa4.57□□□□□ -1.68
CTCFL-203ENST00000422109 MT1MQ8N339 61 aa4.45□□□□□ -1.7
CTCFL-203ENST00000422109 KRTAP19-3Q7Z4W3 81 aa4.44□□□□□ -1.7
CTCFL-203ENST00000422109 SPRR2FQ96RM1 72 aa4.43□□□□□ -1.7
CTCFL-203ENST00000422109 KRTAP19-4Q3LI73 84 aa4.41□□□□□ -1.7
CTCFL-203ENST00000422109 MACF1Q9UPN3 7388 aaKnown RBP4.38□□□□□ -1.71
CTCFL-203ENST00000422109 SYNE1Q8NF91 8797 aaKnown RBP4.34□□□□□ -1.71
CTCFL-203ENST00000422109 SYNE2Q8WXH0 6885 aaKnown RBP4.31□□□□□ -1.72
CTCFL-203ENST00000422109 LCE3BQ5TA77 95 aa4.26□□□□□ -1.73
CTCFL-203ENST00000422109 LCE5AQ5TCM9 118 aa4.25□□□□□ -1.73
CTCFL-203ENST00000422109 MDN1Q9NU22 5596 aa4.23□□□□□ -1.73
CTCFL-203ENST00000422109 KRTAP4-9Q9BYQ8 210 aa4.22□□□□□ -1.73
CTCFL-203ENST00000422109 KRTAP12-4P60329 112 aa4.2□□□□□ -1.74
CTCFL-203ENST00000422109 OBSCNQ5VST9 7968 aa4.12□□□□□ -1.75
CTCFL-203ENST00000422109 KRTAP4-6Q9BYQ5 205 aa4.1□□□□□ -1.75
CTCFL-203ENST00000422109 KRTAP6-1Q3LI64 71 aa4.1□□□□□ -1.75
CTCFL-203ENST00000422109 KRTAP9-2Q9BYQ4 174 aa4.05□□□□□ -1.76
CTCFL-203ENST00000422109 LCE1AQ5T7P2 110 aa4.02□□□□□ -1.77
CTCFL-203ENST00000422109 SPRR2EP22531 72 aa4□□□□□ -1.77
CTCFL-203ENST00000422109 SPRR2BP35325 72 aa4□□□□□ -1.77
CTCFL-203ENST00000422109 SPRR2AP35326 72 aa4□□□□□ -1.77
CTCFL-203ENST00000422109 MT1AP04731 61 aa3.94□□□□□ -1.78
CTCFL-203ENST00000422109 LCE3DQ9BYE3 92 aa3.9□□□□□ -1.79
CTCFL-203ENST00000422109 KRTAP5-9P26371 169 aa3.87□□□□□ -1.79
CTCFL-203ENST00000422109 KRTAP4-12Q9BQ66 201 aa3.84□□□□□ -1.79
CTCFL-203ENST00000422109 KRTAP5-5Q701N2 237 aaPredicted RBP3.83□□□□□ -1.8
CTCFL-203ENST00000422109 KRTAP9-7A8MTY7 169 aa3.82□□□□□ -1.8
CTCFL-203ENST00000422109 LCE3EQ5T5B0 92 aa3.82□□□□□ -1.8
CTCFL-203ENST00000422109 SPRR2DP22532 72 aa3.81□□□□□ -1.8
CTCFL-203ENST00000422109 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.81□□□□□ -1.8
CTCFL-203ENST00000422109 KRTAP2-2Q9BYT5 123 aa3.78□□□□□ -1.81
CTCFL-203ENST00000422109 KRTAP9-6A0A140TA67 174 aa3.77□□□□□ -1.81
CTCFL-203ENST00000422109 KRTAP6-3Q3LI67 103 aa3.75□□□□□ -1.81
CTCFL-203ENST00000422109 LCE1EQ5T753 118 aa3.74□□□□□ -1.81
CTCFL-203ENST00000422109 PRM1P04553 51 aa3.73□□□□□ -1.81
CTCFL-203ENST00000422109 KRTAP9-4Q9BYQ2 154 aa3.72□□□□□ -1.81
CTCFL-203ENST00000422109 LCE4AQ5TA78 99 aa3.7□□□□□ -1.82
CTCFL-203ENST00000422109 KRTAP6-2Q3LI66 62 aa3.69□□□□□ -1.82
CTCFL-203ENST00000422109 KRTAP9-9Q9BYP9 154 aa3.63□□□□□ -1.83
CTCFL-203ENST00000422109 MT3P25713 68 aa3.57□□□□□ -1.84
CTCFL-203ENST00000422109 LCE1DQ5T752 114 aa3.55□□□□□ -1.84
CTCFL-203ENST00000422109 MT4P47944 62 aa3.48□□□□□ -1.85
CTCFL-203ENST00000422109 NEBP20929 6669 aa3.35□□□□□ -1.87
CTCFL-203ENST00000422109 LCE1FQ5T754 118 aa3.34□□□□□ -1.87
CTCFL-203ENST00000422109 KRTAP5-4Q6L8H1 288 aa3.33□□□□□ -1.88
CTCFL-203ENST00000422109 KRTAP4-11Q9BYQ6 195 aa3.26□□□□□ -1.89
CTCFL-203ENST00000422109 KRTAP20-2Q3LI61 65 aa3.24□□□□□ -1.89
CTCFL-203ENST00000422109 KRTAP4-2Q9BYR5 136 aa3.22□□□□□ -1.89
CTCFL-203ENST00000422109 HMCN1Q96RW7 5635 aa3.21□□□□□ -1.9
CTCFL-203ENST00000422109 MUC19Q7Z5P9 8384 aa3.16□□□□□ -1.9
CTCFL-203ENST00000422109 KRTAP5-2Q701N4 177 aa3.1□□□□□ -1.91
CTCFL-203ENST00000422109 LCE1BQ5T7P3 118 aa3.08□□□□□ -1.92
CTCFL-203ENST00000422109 MUC5ACP98088 5654 aa3.07□□□□□ -1.92
CTCFL-203ENST00000422109 KRTAP5-3Q6L8H2 238 aa3.02□□□□□ -1.93
CTCFL-203ENST00000422109 KRTAP20-1Q3LI63 56 aa2.98□□□□□ -1.93
CTCFL-203ENST00000422109 KRTAP5-10Q6L8G5 202 aa2.79□□□□□ -1.96
CTCFL-203ENST00000422109 KRTAP5-1Q6L8H4 278 aa2.7□□□□□ -1.98
CTCFL-203ENST00000422109 LCE1CQ5T751 118 aa2.67□□□□□ -1.98
CTCFL-203ENST00000422109 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -1.99
CTCFL-203ENST00000422109 KRTAP21-2Q3LI59 83 aa2.58□□□□□ -2
CTCFL-203ENST00000422109 KRTAP5-8O75690 187 aa2.54□□□□□ -2
CTCFL-203ENST00000422109 AHNAK2Q8IVF2 5795 aa2.51□□□□□ -2.01
CTCFL-203ENST00000422109 MUC5BQ9HC84 5762 aaPredicted RBP2.48□□□□□ -2.01
CTCFL-203ENST00000422109 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.44□□□□□ -2.02
CTCFL-203ENST00000422109 KRTAP5-7Q6L8G8 165 aa2.34□□□□□ -2.03
CTCFL-203ENST00000422109 KRTAP21-1Q3LI58 79 aa2.29□□□□□ -2.04
CTCFL-203ENST00000422109 KRTAP5-11Q6L8G4 156 aa2.28□□□□□ -2.04
CTCFL-203ENST00000422109 GPR98Q8WXG9 6306 aa2.25□□□□□ -2.05
CTCFL-203ENST00000422109 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
CTCFL-203ENST00000422109 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
CTCFL-203ENST00000422109 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 11.3 ms