RNA–Protein interactions for RNA: ENST00000417640.6

NECAB1-201, Transcript of N-terminal EF-hand calcium binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECAB1, Length 5,289 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB1-201ENST00000417640 FSIP2Q5CZC0 6907 aa5.9□□□□□ -1.46
NECAB1-201ENST00000417640 HMCN2Q8NDA2 5059 aa5.89□□□□□ -1.47
NECAB1-201ENST00000417640 LCE2AQ5TA79 106 aaPredicted RBP5.87□□□□□ -1.47
NECAB1-201ENST00000417640 MT1MQ8N339 61 aa5.83□□□□□ -1.48
NECAB1-201ENST00000417640 MUC2Q02817 5179 aa5.8□□□□□ -1.48
NECAB1-201ENST00000417640 MT3P25713 68 aa5.79□□□□□ -1.48
NECAB1-201ENST00000417640 KRTAP19-6Q3LI70 58 aa5.78□□□□□ -1.48
NECAB1-201ENST00000417640 KRTAP9-2Q9BYQ4 174 aa5.76□□□□□ -1.49
NECAB1-201ENST00000417640 LOC100996750A0A140TA64 210 aa5.74□□□□□ -1.49
NECAB1-201ENST00000417640 KRTAP19-7Q3SYF9 63 aa5.72□□□□□ -1.49
NECAB1-201ENST00000417640 MT4P47944 62 aa5.69□□□□□ -1.5
NECAB1-201ENST00000417640 SYNE1Q8NF91 8797 aaKnown RBP5.68□□□□□ -1.5
NECAB1-201ENST00000417640 KRTAP4-3Q9BYR4 195 aa5.68□□□□□ -1.5
NECAB1-201ENST00000417640 KRTAP2-3P0C7H8 128 aa5.62□□□□□ -1.51
NECAB1-201ENST00000417640 KRTAP2-4Q9BYR9 128 aa5.62□□□□□ -1.51
NECAB1-201ENST00000417640 KRTAP2-1Q9BYU5 128 aa5.62□□□□□ -1.51
NECAB1-201ENST00000417640 PRM1P04553 51 aa5.61□□□□□ -1.51
NECAB1-201ENST00000417640 KRTAP9-6A0A140TA67 174 aa5.56□□□□□ -1.52
NECAB1-201ENST00000417640 LCE1BQ5T7P3 118 aa5.5□□□□□ -1.53
NECAB1-201ENST00000417640 LCE1DQ5T752 114 aa5.47□□□□□ -1.53
NECAB1-201ENST00000417640 MT1AP04731 61 aa5.44□□□□□ -1.54
NECAB1-201ENST00000417640 KRTAP9-6A8MVA2 160 aa5.4□□□□□ -1.54
NECAB1-201ENST00000417640 KRTAP20-1Q3LI63 56 aa5.39□□□□□ -1.55
NECAB1-201ENST00000417640 KRTAP4-9Q9BYQ8 210 aa5.36□□□□□ -1.55
NECAB1-201ENST00000417640 LCE1AQ5T7P2 110 aa5.27□□□□□ -1.57
NECAB1-201ENST00000417640 KRTAP9-7A8MTY7 169 aa5.26□□□□□ -1.57
NECAB1-201ENST00000417640 KRTAP6-3Q3LI67 103 aa5.23□□□□□ -1.57
NECAB1-201ENST00000417640 LCE5AQ5TCM9 118 aa5.21□□□□□ -1.58
NECAB1-201ENST00000417640 USH2AO75445 5202 aa5.16□□□□□ -1.58
NECAB1-201ENST00000417640 OBSCNQ5VST9 7968 aa5.14□□□□□ -1.59
NECAB1-201ENST00000417640 KRTAP6-1Q3LI64 71 aa5.14□□□□□ -1.59
NECAB1-201ENST00000417640 SYNE2Q8WXH0 6885 aaKnown RBP5.09□□□□□ -1.6
NECAB1-201ENST00000417640 LCE4AQ5TA78 99 aa5.08□□□□□ -1.6
NECAB1-201ENST00000417640 KRTAP6-2Q3LI66 62 aa5.01□□□□□ -1.61
NECAB1-201ENST00000417640 KRTAP2-2Q9BYT5 123 aa5.01□□□□□ -1.61
NECAB1-201ENST00000417640 FCGBPQ9Y6R7 5405 aaPredicted RBP5□□□□□ -1.61
NECAB1-201ENST00000417640 KRTAP9-4Q9BYQ2 154 aa4.99□□□□□ -1.61
NECAB1-201ENST00000417640 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.97□□□□□ -1.61
NECAB1-201ENST00000417640 DSTQ03001 7570 aaKnown RBP4.94□□□□□ -1.62
NECAB1-201ENST00000417640 KMT2DO14686 5537 aa4.93□□□□□ -1.62
NECAB1-201ENST00000417640 LCE1CQ5T751 118 aa4.79□□□□□ -1.64
NECAB1-201ENST00000417640 LCE1EQ5T753 118 aa4.79□□□□□ -1.64
NECAB1-201ENST00000417640 LCE1FQ5T754 118 aa4.79□□□□□ -1.64
NECAB1-201ENST00000417640 SSPOA2VEC9 5147 aa4.74□□□□□ -1.65
NECAB1-201ENST00000417640 MACF1Q9UPN3 7388 aaKnown RBP4.73□□□□□ -1.65
NECAB1-201ENST00000417640 MUC12Q9UKN1 5478 aa4.67□□□□□ -1.66
NECAB1-201ENST00000417640 KRTAP5-9P26371 169 aa4.54□□□□□ -1.68
NECAB1-201ENST00000417640 KRTAP9-9Q9BYP9 154 aa4.52□□□□□ -1.69
NECAB1-201ENST00000417640 GPR98Q8WXG9 6306 aa4.37□□□□□ -1.71
NECAB1-201ENST00000417640 MDN1Q9NU22 5596 aa4.31□□□□□ -1.72
NECAB1-201ENST00000417640 NEBP20929 6669 aa4.31□□□□□ -1.72
NECAB1-201ENST00000417640 KRTAP4-6Q9BYQ5 205 aa4.17□□□□□ -1.74
NECAB1-201ENST00000417640 KRTAP4-11Q9BYQ6 195 aa4.13□□□□□ -1.75
NECAB1-201ENST00000417640 MUC19Q7Z5P9 8384 aa4.12□□□□□ -1.75
NECAB1-201ENST00000417640 KRTAP20-2Q3LI61 65 aa4.08□□□□□ -1.76
NECAB1-201ENST00000417640 KRTAP5-5Q701N2 237 aaPredicted RBP4.07□□□□□ -1.76
NECAB1-201ENST00000417640 KRTAP5-4Q6L8H1 288 aa3.81□□□□□ -1.8
NECAB1-201ENST00000417640 KRTAP4-12Q9BQ66 201 aa3.69□□□□□ -1.82
NECAB1-201ENST00000417640 KRTAP4-2Q9BYR5 136 aa3.69□□□□□ -1.82
NECAB1-201ENST00000417640 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
NECAB1-201ENST00000417640 MUC5ACP98088 5654 aa3.55□□□□□ -1.84
NECAB1-201ENST00000417640 AHNAK2Q8IVF2 5795 aa3.46□□□□□ -1.86
NECAB1-201ENST00000417640 HMCN1Q96RW7 5635 aa3.39□□□□□ -1.87
NECAB1-201ENST00000417640 KRTAP5-3Q6L8H2 238 aa3.38□□□□□ -1.87
NECAB1-201ENST00000417640 KRTAP5-2Q701N4 177 aa3.23□□□□□ -1.89
NECAB1-201ENST00000417640 KRTAP5-10Q6L8G5 202 aa3.21□□□□□ -1.9
NECAB1-201ENST00000417640 KRTAP5-8O75690 187 aa3.11□□□□□ -1.91
NECAB1-201ENST00000417640 PHGR1C9JFL3 82 aa2.93□□□□□ -1.94
NECAB1-201ENST00000417640 KRTAP5-1Q6L8H4 278 aa2.84□□□□□ -1.95
NECAB1-201ENST00000417640 MUC5BQ9HC84 5762 aaPredicted RBP2.79□□□□□ -1.96
NECAB1-201ENST00000417640 AHNAKQ09666 5890 aaKnown RBP2.76□□□□□ -1.97
NECAB1-201ENST00000417640 KRTAP5-11Q6L8G4 156 aa2.76□□□□□ -1.97
NECAB1-201ENST00000417640 KRTAP21-2Q3LI59 83 aa2.71□□□□□ -1.97
NECAB1-201ENST00000417640 KRTAP21-1Q3LI58 79 aa2.57□□□□□ -2
NECAB1-201ENST00000417640 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
NECAB1-201ENST00000417640 KRTAP5-7Q6L8G8 165 aa2.36□□□□□ -2.03
NECAB1-201ENST00000417640 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 140.7 ms