RNA–Protein interactions for RNA: ENST00000417243.5

TRAPPC12-206, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 1,047 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-206ENST00000417243 KRTAP19-7Q3SYF9 63 aa4.7□□□□□ -1.66
TRAPPC12-206ENST00000417243 LOC100996750A0A140TA64 210 aa4.69□□□□□ -1.66
TRAPPC12-206ENST00000417243 KRTAP4-6Q9BYQ5 205 aa4.69□□□□□ -1.66
TRAPPC12-206ENST00000417243 KRTAP19-5Q3LI72 72 aa4.65□□□□□ -1.67
TRAPPC12-206ENST00000417243 MT1EP04732 61 aa4.64□□□□□ -1.67
TRAPPC12-206ENST00000417243 PP632Q6XCG6 107 aa4.64□□□□□ -1.67
TRAPPC12-206ENST00000417243 KRTAP12-3P60328 96 aa4.59□□□□□ -1.67
TRAPPC12-206ENST00000417243 KRTAP2-2Q9BYT5 123 aa4.58□□□□□ -1.68
TRAPPC12-206ENST00000417243 KRTAP2-1Q9BYU5 128 aa4.58□□□□□ -1.68
TRAPPC12-206ENST00000417243 LCE1AQ5T7P2 110 aa4.57□□□□□ -1.68
TRAPPC12-206ENST00000417243 SPRR2EP22531 72 aa4.55□□□□□ -1.68
TRAPPC12-206ENST00000417243 SPRR2BP35325 72 aa4.55□□□□□ -1.68
TRAPPC12-206ENST00000417243 SPRR2AP35326 72 aa4.55□□□□□ -1.68
TRAPPC12-206ENST00000417243 KRTAP19-3Q7Z4W3 81 aa4.51□□□□□ -1.69
TRAPPC12-206ENST00000417243 MT1LQ93083 61 aa4.5□□□□□ -1.69
TRAPPC12-206ENST00000417243 LCE5AQ5TCM9 118 aa4.48□□□□□ -1.69
TRAPPC12-206ENST00000417243 MT1GP13640 62 aa4.45□□□□□ -1.7
TRAPPC12-206ENST00000417243 KRTAP19-4Q3LI73 84 aa4.42□□□□□ -1.7
TRAPPC12-206ENST00000417243 KRTAP15-1Q3LI76 137 aa4.42□□□□□ -1.7
TRAPPC12-206ENST00000417243 SPRR2DP22532 72 aa4.4□□□□□ -1.71
TRAPPC12-206ENST00000417243 PRAC1Q96KF2 57 aa4.4□□□□□ -1.71
TRAPPC12-206ENST00000417243 DSTQ03001 7570 aaKnown RBP4.4□□□□□ -1.71
TRAPPC12-206ENST00000417243 MT1MQ8N339 61 aa4.38□□□□□ -1.71
TRAPPC12-206ENST00000417243 A0A0A0MQY5 61 aa4.28□□□□□ -1.72
TRAPPC12-206ENST00000417243 LCE3CQ5T5A8 94 aa4.26□□□□□ -1.73
TRAPPC12-206ENST00000417243 LCE3BQ5TA77 95 aa4.25□□□□□ -1.73
TRAPPC12-206ENST00000417243 KRTAP4-7Q9BYR0 210 aa4.25□□□□□ -1.73
TRAPPC12-206ENST00000417243 KRTAP4-3Q9BYR4 195 aa4.21□□□□□ -1.74
TRAPPC12-206ENST00000417243 KRTAP4-9Q9BYQ8 210 aa4.17□□□□□ -1.74
TRAPPC12-206ENST00000417243 HMCN1Q96RW7 5635 aa4.17□□□□□ -1.74
TRAPPC12-206ENST00000417243 AHNAK2Q8IVF2 5795 aa4.16□□□□□ -1.74
TRAPPC12-206ENST00000417243 KRTAP5-10Q6L8G5 202 aa4.02□□□□□ -1.77
TRAPPC12-206ENST00000417243 SPRR5A0A1B0GTR4 108 aa4.01□□□□□ -1.77
TRAPPC12-206ENST00000417243 KRTAP9-6A8MVA2 160 aa4.01□□□□□ -1.77
TRAPPC12-206ENST00000417243 KRTAP5-5Q701N2 237 aaPredicted RBP4.01□□□□□ -1.77
TRAPPC12-206ENST00000417243 LUZP6Q538Z0 58 aa3.97□□□□□ -1.77
TRAPPC12-206ENST00000417243 KRTAP5-4Q6L8H1 288 aa3.97□□□□□ -1.77
TRAPPC12-206ENST00000417243 LCE1DQ5T752 114 aa3.96□□□□□ -1.78
TRAPPC12-206ENST00000417243 LCE4AQ5TA78 99 aa3.95□□□□□ -1.78
TRAPPC12-206ENST00000417243 KRTAP4-12Q9BQ66 201 aa3.95□□□□□ -1.78
TRAPPC12-206ENST00000417243 KRTAP5-7Q6L8G8 165 aa3.94□□□□□ -1.78
TRAPPC12-206ENST00000417243 KRTAP9-9Q9BYP9 154 aa3.94□□□□□ -1.78
TRAPPC12-206ENST00000417243 KRTAP9-4Q9BYQ2 154 aa3.94□□□□□ -1.78
TRAPPC12-206ENST00000417243 NDUFAF8A1L188 74 aa3.93□□□□□ -1.78
TRAPPC12-206ENST00000417243 MT1AP04731 61 aa3.84□□□□□ -1.79
TRAPPC12-206ENST00000417243 MT4P47944 62 aa3.83□□□□□ -1.8
TRAPPC12-206ENST00000417243 KRTAP6-1Q3LI64 71 aa3.77□□□□□ -1.81
TRAPPC12-206ENST00000417243 KRTAP5-3Q6L8H2 238 aa3.77□□□□□ -1.81
TRAPPC12-206ENST00000417243 KRTAP12-4P60329 112 aa3.76□□□□□ -1.81
TRAPPC12-206ENST00000417243 SYNE1Q8NF91 8797 aaKnown RBP3.75□□□□□ -1.81
TRAPPC12-206ENST00000417243 KRTAP20-2Q3LI61 65 aa3.7□□□□□ -1.82
TRAPPC12-206ENST00000417243 AHNAKQ09666 5890 aaKnown RBP3.68□□□□□ -1.82
TRAPPC12-206ENST00000417243 KRTAP4-2Q9BYR5 136 aa3.64□□□□□ -1.83
TRAPPC12-206ENST00000417243 MUC5ACP98088 5654 aa3.56□□□□□ -1.84
TRAPPC12-206ENST00000417243 KRTAP5-2Q701N4 177 aa3.56□□□□□ -1.84
TRAPPC12-206ENST00000417243 MUC5BQ9HC84 5762 aaPredicted RBP3.52□□□□□ -1.85
TRAPPC12-206ENST00000417243 KRTAP6-2Q3LI66 62 aa3.51□□□□□ -1.85
TRAPPC12-206ENST00000417243 KRTAP4-11Q9BYQ6 195 aa3.51□□□□□ -1.85
TRAPPC12-206ENST00000417243 MT3P25713 68 aa3.48□□□□□ -1.85
TRAPPC12-206ENST00000417243 INE1O15225 51 aa3.42□□□□□ -1.86
TRAPPC12-206ENST00000417243 KRTAP5-8O75690 187 aa3.26□□□□□ -1.89
TRAPPC12-206ENST00000417243 OBSCNQ5VST9 7968 aa3.19□□□□□ -1.9
TRAPPC12-206ENST00000417243 LCE3DQ9BYE3 92 aa3.15□□□□□ -1.91
TRAPPC12-206ENST00000417243 LCE1EQ5T753 118 aa3.13□□□□□ -1.91
TRAPPC12-206ENST00000417243 KRTAP5-1Q6L8H4 278 aa3.1□□□□□ -1.91
TRAPPC12-206ENST00000417243 LCE3EQ5T5B0 92 aa3.03□□□□□ -1.92
TRAPPC12-206ENST00000417243 LCE1CQ5T751 118 aa2.9□□□□□ -1.95
TRAPPC12-206ENST00000417243 LCE1BQ5T7P3 118 aa2.9□□□□□ -1.95
TRAPPC12-206ENST00000417243 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.72□□□□□ -1.97
TRAPPC12-206ENST00000417243 KRTAP5-11Q6L8G4 156 aa2.6□□□□□ -1.99
TRAPPC12-206ENST00000417243 KRTAP21-2Q3LI59 83 aa2.5□□□□□ -2.01
TRAPPC12-206ENST00000417243 PRM1P04553 51 aa2.49□□□□□ -2.01
TRAPPC12-206ENST00000417243 LCE1FQ5T754 118 aa2.43□□□□□ -2.02
TRAPPC12-206ENST00000417243 PHGR1C9JFL3 82 aa2.36□□□□□ -2.03
TRAPPC12-206ENST00000417243 KRTAP4-4Q9BYR3 166 aa2.16□□□□□ -2.06
TRAPPC12-206ENST00000417243 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
TRAPPC12-206ENST00000417243 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.12
TRAPPC12-206ENST00000417243 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 12.3 ms