RNA–Protein interactions for RNA: ENST00000417231.5

UBE2F-207, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 984 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-207ENST00000417231 LCE4AQ5TA78 99 aa6.88□□□□□ -1.31
UBE2F-207ENST00000417231 LINC01558Q9Y6Z2 57 aa6.87□□□□□ -1.31
UBE2F-207ENST00000417231 ATP5EP56381 51 aaPredicted RBP6.86□□□□□ -1.31
UBE2F-207ENST00000417231 HMCN1Q96RW7 5635 aa6.85□□□□□ -1.31
UBE2F-207ENST00000417231 KRTAP4-7Q9BYR0 210 aa6.78□□□□□ -1.32
UBE2F-207ENST00000417231 KRTAP12-3P60328 96 aa6.75□□□□□ -1.33
UBE2F-207ENST00000417231 KRTAP5-4Q6L8H1 288 aa6.74□□□□□ -1.33
UBE2F-207ENST00000417231 UQCR11O14957 56 aa6.72□□□□□ -1.33
UBE2F-207ENST00000417231 KRTAP4-6Q9BYQ5 205 aa6.7□□□□□ -1.34
UBE2F-207ENST00000417231 TMEM258P61165 79 aa6.66□□□□□ -1.34
UBE2F-207ENST00000417231 AHNAK2Q8IVF2 5795 aa6.63□□□□□ -1.35
UBE2F-207ENST00000417231 MIR22HGQ0VDD5 57 aa6.58□□□□□ -1.36
UBE2F-207ENST00000417231 KRTAP25-1Q3LHN0 102 aa6.53□□□□□ -1.36
UBE2F-207ENST00000417231 KRTAP5-10Q6L8G5 202 aa6.48□□□□□ -1.37
UBE2F-207ENST00000417231 KRTAP5-5Q701N2 237 aaPredicted RBP6.44□□□□□ -1.38
UBE2F-207ENST00000417231 K7ERS5 55 aa6.43□□□□□ -1.38
UBE2F-207ENST00000417231 PSPHP1O15172 72 aa6.43□□□□□ -1.38
UBE2F-207ENST00000417231 LOC100996750A0A140TA64 210 aa6.42□□□□□ -1.38
UBE2F-207ENST00000417231 KRTAP20-2Q3LI61 65 aa6.39□□□□□ -1.39
UBE2F-207ENST00000417231 KRTAP5-3Q6L8H2 238 aa6.33□□□□□ -1.4
UBE2F-207ENST00000417231 V9GYY9 64 aa6.32□□□□□ -1.4
UBE2F-207ENST00000417231 SPRR5A0A1B0GTR4 108 aa6.31□□□□□ -1.4
UBE2F-207ENST00000417231 Q1T7F1 81 aa6.31□□□□□ -1.4
UBE2F-207ENST00000417231 SYNE1Q8NF91 8797 aaKnown RBP6.31□□□□□ -1.4
UBE2F-207ENST00000417231 KRTAP12-4P60329 112 aa6.3□□□□□ -1.4
UBE2F-207ENST00000417231 KRTAP15-1Q3LI76 137 aa6.27□□□□□ -1.41
UBE2F-207ENST00000417231 KRTAP19-4Q3LI73 84 aa6.24□□□□□ -1.41
UBE2F-207ENST00000417231 KRTAP23-1A1A580 65 aa6.23□□□□□ -1.41
UBE2F-207ENST00000417231 KRTAP5-7Q6L8G8 165 aa6.22□□□□□ -1.41
UBE2F-207ENST00000417231 LCE3CQ5T5A8 94 aa6.21□□□□□ -1.42
UBE2F-207ENST00000417231 A6NED7 52 aa6.17□□□□□ -1.42
UBE2F-207ENST00000417231 CDC42SE1Q9NRR8 79 aa6.09□□□□□ -1.43
UBE2F-207ENST00000417231 ROMO1P60602 79 aa6.01□□□□□ -1.45
UBE2F-207ENST00000417231 KRTAP6-1Q3LI64 71 aa5.99□□□□□ -1.45
UBE2F-207ENST00000417231 MT1AP04731 61 aa5.97□□□□□ -1.45
UBE2F-207ENST00000417231 RPS28P62857 69 aaKnown RBP5.95□□□□□ -1.46
UBE2F-207ENST00000417231 KRTAP9-6A8MVA2 160 aa5.9□□□□□ -1.46
UBE2F-207ENST00000417231 KRTAP5-2Q701N4 177 aa5.88□□□□□ -1.47
UBE2F-207ENST00000417231 KRTAP4-11Q9BYQ6 195 aa5.86□□□□□ -1.47
UBE2F-207ENST00000417231 KRTAP9-4Q9BYQ2 154 aa5.81□□□□□ -1.48
UBE2F-207ENST00000417231 KRTAP6-2Q3LI66 62 aa5.75□□□□□ -1.49
UBE2F-207ENST00000417231 OBSCNQ5VST9 7968 aa5.7□□□□□ -1.5
UBE2F-207ENST00000417231 KRTAP5-8O75690 187 aa5.67□□□□□ -1.5
UBE2F-207ENST00000417231 PCP4P48539 62 aa5.65□□□□□ -1.5
UBE2F-207ENST00000417231 AHNAKQ09666 5890 aaKnown RBP5.51□□□□□ -1.53
UBE2F-207ENST00000417231 MUC5ACP98088 5654 aa5.48□□□□□ -1.53
UBE2F-207ENST00000417231 MUC5BQ9HC84 5762 aaPredicted RBP5.47□□□□□ -1.53
UBE2F-207ENST00000417231 MT3P25713 68 aa5.47□□□□□ -1.53
UBE2F-207ENST00000417231 KRTAP9-9Q9BYP9 154 aa5.38□□□□□ -1.55
UBE2F-207ENST00000417231 KRTAP5-1Q6L8H4 278 aa5.32□□□□□ -1.56
UBE2F-207ENST00000417231 BRK1Q8WUW1 75 aa5.14□□□□□ -1.59
UBE2F-207ENST00000417231 KRTAP4-12Q9BQ66 201 aa5.03□□□□□ -1.6
UBE2F-207ENST00000417231 LCE1EQ5T753 118 aa5.02□□□□□ -1.61
UBE2F-207ENST00000417231 H3BS24 57 aa4.97□□□□□ -1.61
UBE2F-207ENST00000417231 LCE1BQ5T7P3 118 aa4.83□□□□□ -1.64
UBE2F-207ENST00000417231 PMAIP1Q13794 54 aa4.82□□□□□ -1.64
UBE2F-207ENST00000417231 KRTAP4-2Q9BYR5 136 aa4.79□□□□□ -1.64
UBE2F-207ENST00000417231 PRAC1Q96KF2 57 aa4.74□□□□□ -1.65
UBE2F-207ENST00000417231 LCE1CQ5T751 118 aa4.67□□□□□ -1.66
UBE2F-207ENST00000417231 LCE3DQ9BYE3 92 aa4.45□□□□□ -1.7
UBE2F-207ENST00000417231 PRO0628Q9UI54 55 aa4.24□□□□□ -1.73
UBE2F-207ENST00000417231 KRTAP5-11Q6L8G4 156 aa4.22□□□□□ -1.73
UBE2F-207ENST00000417231 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.2□□□□□ -1.74
UBE2F-207ENST00000417231 LCE3EQ5T5B0 92 aa4.17□□□□□ -1.74
UBE2F-207ENST00000417231 LCE1FQ5T754 118 aa4.11□□□□□ -1.75
UBE2F-207ENST00000417231 KTN1-AS1Q86SY8 53 aa4.11□□□□□ -1.75
UBE2F-207ENST00000417231 SVIPQ8NHG7 77 aa4.03□□□□□ -1.76
UBE2F-207ENST00000417231 LUZP6Q538Z0 58 aa3.95□□□□□ -1.78
UBE2F-207ENST00000417231 KRTAP21-2Q3LI59 83 aa3.93□□□□□ -1.78
UBE2F-207ENST00000417231 PHGR1C9JFL3 82 aa3.8□□□□□ -1.8
UBE2F-207ENST00000417231 KRTAP4-4Q9BYR3 166 aa3.69□□□□□ -1.82
UBE2F-207ENST00000417231 MUC19Q7Z5P9 8384 aa3.49□□□□□ -1.85
UBE2F-207ENST00000417231 PRM1P04553 51 aa3.09□□□□□ -1.91
UBE2F-207ENST00000417231 A0A0A0MQY5 61 aa3.07□□□□□ -1.92
UBE2F-207ENST00000417231 NDUFAF8A1L188 74 aa3.01□□□□□ -1.93
UBE2F-207ENST00000417231 KRTAP21-1Q3LI58 79 aa2.85□□□□□ -1.95
UBE2F-207ENST00000417231 MUC16Q8WXI7 14507 aa2.44□□□□□ -2.02
UBE2F-207ENST00000417231 INE1O15225 51 aa2.29□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 327.7 ms