RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 LCE1BQ5T7P3 118 aa1.75□□□□□ -2.13
LMBR1-204ENST00000415428 C14orf144Q96I85 54 aa1.74□□□□□ -2.13
LMBR1-204ENST00000415428 UQCR10Q9UDW1 63 aa1.74□□□□□ -2.13
LMBR1-204ENST00000415428 KRTAP13-4Q3LI77 160 aa1.73□□□□□ -2.13
LMBR1-204ENST00000415428 A6NED7 52 aa1.72□□□□□ -2.13
LMBR1-204ENST00000415428 PRO0461Q9UI25 63 aa1.71□□□□□ -2.14
LMBR1-204ENST00000415428 K7ERS5 55 aa1.71□□□□□ -2.14
LMBR1-204ENST00000415428 Q8N9L7 120 aa1.71□□□□□ -2.14
LMBR1-204ENST00000415428 SPTSSBQ8NFR3 76 aa1.71□□□□□ -2.14
LMBR1-204ENST00000415428 UBL5Q9BZL1 73 aa1.71□□□□□ -2.14
LMBR1-204ENST00000415428 KRTAP6-2Q3LI66 62 aa1.7□□□□□ -2.14
LMBR1-204ENST00000415428 KRTAP12-3P60328 96 aa1.7□□□□□ -2.14
LMBR1-204ENST00000415428 SCGB1A1P11684 91 aa1.69□□□□□ -2.14
LMBR1-204ENST00000415428 MT3P25713 68 aa1.68□□□□□ -2.14
LMBR1-204ENST00000415428 H0Y9P7 68 aa1.68□□□□□ -2.14
LMBR1-204ENST00000415428 M0R143 59 aa1.68□□□□□ -2.14
LMBR1-204ENST00000415428 KRTAP12-1P59990 96 aa1.67□□□□□ -2.14
LMBR1-204ENST00000415428 A0A1W2PPM0 123 aa1.65□□□□□ -2.15
LMBR1-204ENST00000415428 SPANXA2-OT1Q8N9U9 137 aa1.64□□□□□ -2.15
LMBR1-204ENST00000415428 KTN1-AS1Q86SY8 53 aa1.63□□□□□ -2.15
LMBR1-204ENST00000415428 LCE3CQ5T5A8 94 aa1.63□□□□□ -2.15
LMBR1-204ENST00000415428 PYY3Q5JQD4 70 aa1.63□□□□□ -2.15
LMBR1-204ENST00000415428 A0A1B0GV90 55 aa1.62□□□□□ -2.15
LMBR1-204ENST00000415428 SYNE1Q8NF91 8797 aaKnown RBP1.61□□□□□ -2.15
LMBR1-204ENST00000415428 MT-ATP8P03928 68 aa1.61□□□□□ -2.15
LMBR1-204ENST00000415428 TNP1P09430 55 aa1.61□□□□□ -2.15
LMBR1-204ENST00000415428 LINC01554Q52M75 96 aa1.61□□□□□ -2.15
LMBR1-204ENST00000415428 K7EP34 96 aa1.59□□□□□ -2.15
LMBR1-204ENST00000415428 ACYP2P14621 99 aa1.59□□□□□ -2.15
LMBR1-204ENST00000415428 RPS28P62857 69 aaKnown RBP1.59□□□□□ -2.15
LMBR1-204ENST00000415428 S100A1P23297 94 aa1.59□□□□□ -2.16
LMBR1-204ENST00000415428 KRTAP25-1Q3LHN0 102 aa1.59□□□□□ -2.16
LMBR1-204ENST00000415428 BRK1Q8WUW1 75 aa1.57□□□□□ -2.16
LMBR1-204ENST00000415428 HIST1H4AP62805 103 aaKnown RBP1.56□□□□□ -2.16
LMBR1-204ENST00000415428 KRTAP4-4Q9BYR3 166 aa1.56□□□□□ -2.16
LMBR1-204ENST00000415428 A0A1B0GU33 70 aa1.54□□□□□ -2.16
LMBR1-204ENST00000415428 SPCS1Q9Y6A9 102 aa1.54□□□□□ -2.16
LMBR1-204ENST00000415428 K7ERU9 68 aa1.53□□□□□ -2.16
LMBR1-204ENST00000415428 SPINT4Q6UDR6 99 aa1.53□□□□□ -2.16
LMBR1-204ENST00000415428 J3QR89 54 aa1.51□□□□□ -2.17
LMBR1-204ENST00000415428 KRTAP9-6A8MVA2 160 aa1.5□□□□□ -2.17
LMBR1-204ENST00000415428 LINC00208Q96KT6 92 aa1.49□□□□□ -2.17
LMBR1-204ENST00000415428 F8W1H4 67 aa1.48□□□□□ -2.17
LMBR1-204ENST00000415428 TMEM258P61165 79 aa1.48□□□□□ -2.17
LMBR1-204ENST00000415428 ROMO1P60602 79 aa1.45□□□□□ -2.18
LMBR1-204ENST00000415428 A8MU10 97 aa1.45□□□□□ -2.18
LMBR1-204ENST00000415428 LINC00643Q86TS7 51 aa1.45□□□□□ -2.18
LMBR1-204ENST00000415428 SMIM6P0DI80 62 aa1.43□□□□□ -2.18
LMBR1-204ENST00000415428 CCDC179H3BU77 68 aa1.43□□□□□ -2.18
LMBR1-204ENST00000415428 PHGR1C9JFL3 82 aa1.38□□□□□ -2.19
LMBR1-204ENST00000415428 MIR22HGQ0VDD5 57 aa1.37□□□□□ -2.19
LMBR1-204ENST00000415428 GTF2H5Q6ZYL4 71 aa1.37□□□□□ -2.19
LMBR1-204ENST00000415428 Q1T7F1 81 aa1.35□□□□□ -2.19
LMBR1-204ENST00000415428 LCE3EQ5T5B0 92 aa1.35□□□□□ -2.19
LMBR1-204ENST00000415428 SERP1Q9Y6X1 66 aa1.33□□□□□ -2.2
LMBR1-204ENST00000415428 KRTAP21-2Q3LI59 83 aa1.32□□□□□ -2.2
LMBR1-204ENST00000415428 COA5Q86WW8 74 aa1.3□□□□□ -2.2
LMBR1-204ENST00000415428 CDC42SE1Q9NRR8 79 aa1.3□□□□□ -2.2
LMBR1-204ENST00000415428 COX7CP15954 63 aa1.29□□□□□ -2.2
LMBR1-204ENST00000415428 KRTAP21-1Q3LI58 79 aa1.28□□□□□ -2.21
LMBR1-204ENST00000415428 COL5A1-AS1Q5SY13 56 aa1.28□□□□□ -2.21
LMBR1-204ENST00000415428 SPATA8Q6RVD6 105 aa1.27□□□□□ -2.21
LMBR1-204ENST00000415428 CHKB-CPT1BH3BT56 60 aa1.26□□□□□ -2.21
LMBR1-204ENST00000415428 PRR15LQ9BU68 103 aa1.24□□□□□ -2.21
LMBR1-204ENST00000415428 OBSCNQ5VST9 7968 aa1.23□□□□□ -2.21
LMBR1-204ENST00000415428 ETDBQ3ZM63 59 aa1.21□□□□□ -2.22
LMBR1-204ENST00000415428 H7BZZ5 65 aa1.21□□□□□ -2.22
LMBR1-204ENST00000415428 LCE3DQ9BYE3 92 aa1.2□□□□□ -2.22
LMBR1-204ENST00000415428 SNURFQ9Y675 71 aa1.19□□□□□ -2.22
LMBR1-204ENST00000415428 ATP5EP56381 51 aaPredicted RBP1.19□□□□□ -2.22
LMBR1-204ENST00000415428 INE1O15225 51 aa1.18□□□□□ -2.22
LMBR1-204ENST00000415428 LINC01558Q9Y6Z2 57 aa1.11□□□□□ -2.23
LMBR1-204ENST00000415428 SERP2Q8N6R1 65 aa1.1□□□□□ -2.23
LMBR1-204ENST00000415428 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.23
LMBR1-204ENST00000415428 A0A1B0GU69 56 aa1.07□□□□□ -2.24
LMBR1-204ENST00000415428 UQCR11O14957 56 aa1.01□□□□□ -2.25
LMBR1-204ENST00000415428 MUC19Q7Z5P9 8384 aa0.78□□□□□ -2.28
LMBR1-204ENST00000415428 PRM1P04553 51 aa0.44□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 11.6 ms