RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 UQCR11O14957 56 aa4.69□□□□□ -1.66
NCKIPSD-203ENST00000415281 CDC42SE1Q9NRR8 79 aa4.69□□□□□ -1.66
NCKIPSD-203ENST00000415281 MT1EP04732 61 aa4.66□□□□□ -1.66
NCKIPSD-203ENST00000415281 KRTAP4-9Q9BYQ8 210 aa4.65□□□□□ -1.67
NCKIPSD-203ENST00000415281 MIR22HGQ0VDD5 57 aa4.62□□□□□ -1.67
NCKIPSD-203ENST00000415281 KRTAP19-3Q7Z4W3 81 aa4.62□□□□□ -1.67
NCKIPSD-203ENST00000415281 C10orf95Q9H7T3 257 aa4.58□□□□□ -1.68
NCKIPSD-203ENST00000415281 TNP1P09430 55 aa4.53□□□□□ -1.68
NCKIPSD-203ENST00000415281 KRTAP19-5Q3LI72 72 aa4.51□□□□□ -1.69
NCKIPSD-203ENST00000415281 LCE1DQ5T752 114 aa4.51□□□□□ -1.69
NCKIPSD-203ENST00000415281 K7ERS5 55 aa4.49□□□□□ -1.69
NCKIPSD-203ENST00000415281 MT1GP13640 62 aa4.49□□□□□ -1.69
NCKIPSD-203ENST00000415281 HMCN1Q96RW7 5635 aa4.47□□□□□ -1.69
NCKIPSD-203ENST00000415281 LCE3AQ5TA76 89 aa4.45□□□□□ -1.7
NCKIPSD-203ENST00000415281 MT1MQ8N339 61 aa4.45□□□□□ -1.7
NCKIPSD-203ENST00000415281 MT1LQ93083 61 aa4.42□□□□□ -1.7
NCKIPSD-203ENST00000415281 KRTAP4-3Q9BYR4 195 aa4.42□□□□□ -1.7
NCKIPSD-203ENST00000415281 LCE4AQ5TA78 99 aa4.41□□□□□ -1.7
NCKIPSD-203ENST00000415281 MT4P47944 62 aa4.4□□□□□ -1.71
NCKIPSD-203ENST00000415281 H3BS24 57 aa4.38□□□□□ -1.71
NCKIPSD-203ENST00000415281 KRTAP5-4Q6L8H1 288 aa4.38□□□□□ -1.71
NCKIPSD-203ENST00000415281 AHNAK2Q8IVF2 5795 aa4.36□□□□□ -1.71
NCKIPSD-203ENST00000415281 KRTAP25-1Q3LHN0 102 aa4.34□□□□□ -1.71
NCKIPSD-203ENST00000415281 PP632Q6XCG6 107 aa4.34□□□□□ -1.71
NCKIPSD-203ENST00000415281 KRTAP4-6Q9BYQ5 205 aa4.33□□□□□ -1.72
NCKIPSD-203ENST00000415281 KRTAP5-10Q6L8G5 202 aa4.3□□□□□ -1.72
NCKIPSD-203ENST00000415281 PRAC1Q96KF2 57 aa4.3□□□□□ -1.72
NCKIPSD-203ENST00000415281 KRTAP12-3P60328 96 aa4.27□□□□□ -1.73
NCKIPSD-203ENST00000415281 KRTAP4-7Q9BYR0 210 aa4.26□□□□□ -1.73
NCKIPSD-203ENST00000415281 ROMO1P60602 79 aa4.22□□□□□ -1.73
NCKIPSD-203ENST00000415281 KRTAP23-1A1A580 65 aa4.16□□□□□ -1.74
NCKIPSD-203ENST00000415281 KRTAP5-3Q6L8H2 238 aa4.15□□□□□ -1.75
NCKIPSD-203ENST00000415281 KRTAP5-7Q6L8G8 165 aa4.14□□□□□ -1.75
NCKIPSD-203ENST00000415281 KRTAP5-5Q701N2 237 aaPredicted RBP4.14□□□□□ -1.75
NCKIPSD-203ENST00000415281 KRTAP20-2Q3LI61 65 aa4.11□□□□□ -1.75
NCKIPSD-203ENST00000415281 SYNE1Q8NF91 8797 aaKnown RBP4.07□□□□□ -1.76
NCKIPSD-203ENST00000415281 KRTAP15-1Q3LI76 137 aa4.05□□□□□ -1.76
NCKIPSD-203ENST00000415281 LOC100996750A0A140TA64 210 aa4.04□□□□□ -1.76
NCKIPSD-203ENST00000415281 SPRR5A0A1B0GTR4 108 aa4.04□□□□□ -1.76
NCKIPSD-203ENST00000415281 KRTAP19-4Q3LI73 84 aa3.98□□□□□ -1.77
NCKIPSD-203ENST00000415281 LCE3CQ5T5A8 94 aa3.95□□□□□ -1.78
NCKIPSD-203ENST00000415281 KRTAP12-4P60329 112 aa3.93□□□□□ -1.78
NCKIPSD-203ENST00000415281 NDUFAF8A1L188 74 aa3.82□□□□□ -1.8
NCKIPSD-203ENST00000415281 KRTAP5-2Q701N4 177 aa3.81□□□□□ -1.8
NCKIPSD-203ENST00000415281 KRTAP4-11Q9BYQ6 195 aa3.78□□□□□ -1.8
NCKIPSD-203ENST00000415281 KRTAP6-1Q3LI64 71 aa3.77□□□□□ -1.81
NCKIPSD-203ENST00000415281 A0A0A0MQY5 61 aa3.76□□□□□ -1.81
NCKIPSD-203ENST00000415281 KRTAP9-6A8MVA2 160 aa3.73□□□□□ -1.81
NCKIPSD-203ENST00000415281 MT1AP04731 61 aa3.73□□□□□ -1.81
NCKIPSD-203ENST00000415281 LUZP6Q538Z0 58 aa3.73□□□□□ -1.81
NCKIPSD-203ENST00000415281 KRTAP5-8O75690 187 aa3.71□□□□□ -1.82
NCKIPSD-203ENST00000415281 OBSCNQ5VST9 7968 aa3.66□□□□□ -1.82
NCKIPSD-203ENST00000415281 KRTAP9-4Q9BYQ2 154 aa3.65□□□□□ -1.83
NCKIPSD-203ENST00000415281 KRTAP6-2Q3LI66 62 aa3.61□□□□□ -1.83
NCKIPSD-203ENST00000415281 MUC5ACP98088 5654 aa3.61□□□□□ -1.83
NCKIPSD-203ENST00000415281 MUC5BQ9HC84 5762 aaPredicted RBP3.6□□□□□ -1.83
NCKIPSD-203ENST00000415281 AHNAKQ09666 5890 aaKnown RBP3.59□□□□□ -1.84
NCKIPSD-203ENST00000415281 KRTAP5-1Q6L8H4 278 aa3.46□□□□□ -1.86
NCKIPSD-203ENST00000415281 KRTAP9-9Q9BYP9 154 aa3.43□□□□□ -1.86
NCKIPSD-203ENST00000415281 MT3P25713 68 aa3.38□□□□□ -1.87
NCKIPSD-203ENST00000415281 INE1O15225 51 aa3.32□□□□□ -1.88
NCKIPSD-203ENST00000415281 LCE1EQ5T753 118 aa3.18□□□□□ -1.9
NCKIPSD-203ENST00000415281 KRTAP4-2Q9BYR5 136 aa3.09□□□□□ -1.91
NCKIPSD-203ENST00000415281 LCE1BQ5T7P3 118 aa2.98□□□□□ -1.93
NCKIPSD-203ENST00000415281 LCE1CQ5T751 118 aa2.96□□□□□ -1.94
NCKIPSD-203ENST00000415281 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
NCKIPSD-203ENST00000415281 KRTAP4-12Q9BQ66 201 aa2.85□□□□□ -1.95
NCKIPSD-203ENST00000415281 LCE3EQ5T5B0 92 aa2.74□□□□□ -1.97
NCKIPSD-203ENST00000415281 KRTAP5-11Q6L8G4 156 aa2.7□□□□□ -1.98
NCKIPSD-203ENST00000415281 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.7□□□□□ -1.98
NCKIPSD-203ENST00000415281 LCE1FQ5T754 118 aa2.64□□□□□ -1.99
NCKIPSD-203ENST00000415281 KRTAP21-2Q3LI59 83 aa2.52□□□□□ -2.01
NCKIPSD-203ENST00000415281 PHGR1C9JFL3 82 aa2.46□□□□□ -2.02
NCKIPSD-203ENST00000415281 KRTAP4-4Q9BYR3 166 aa2.31□□□□□ -2.04
NCKIPSD-203ENST00000415281 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
NCKIPSD-203ENST00000415281 PRM1P04553 51 aa2.18□□□□□ -2.06
NCKIPSD-203ENST00000415281 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
NCKIPSD-203ENST00000415281 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 128.4 ms