RNA–Protein interactions for RNA: ENST00000414461.6

RBFOX2-207, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 1 (best) BASIC

Gene RBFOX2, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-207ENST00000414461 R4GN34 69 aa3.73□□□□□ -1.81
RBFOX2-207ENST00000414461 LCE1AQ5T7P2 110 aa3.71□□□□□ -1.82
RBFOX2-207ENST00000414461 FCGBPQ9Y6R7 5405 aaPredicted RBP3.69□□□□□ -1.82
RBFOX2-207ENST00000414461 MT2AP02795 61 aa3.67□□□□□ -1.82
RBFOX2-207ENST00000414461 SYNE2Q8WXH0 6885 aaKnown RBP3.67□□□□□ -1.82
RBFOX2-207ENST00000414461 MACF1Q9UPN3 7388 aaKnown RBP3.66□□□□□ -1.82
RBFOX2-207ENST00000414461 MT1FP04733 61 aa3.65□□□□□ -1.82
RBFOX2-207ENST00000414461 KRTAP10-10P60014 251 aa3.65□□□□□ -1.82
RBFOX2-207ENST00000414461 CAMK2N1Q7Z7J9 78 aa3.65□□□□□ -1.82
RBFOX2-207ENST00000414461 KRTAP5-8O75690 187 aa3.62□□□□□ -1.83
RBFOX2-207ENST00000414461 SPRR5A0A1B0GTR4 108 aa3.61□□□□□ -1.83
RBFOX2-207ENST00000414461 KRTAP2-2Q9BYT5 123 aa3.58□□□□□ -1.84
RBFOX2-207ENST00000414461 HMCN1Q96RW7 5635 aa3.56□□□□□ -1.84
RBFOX2-207ENST00000414461 PRO2289Q9P1D8 64 aa3.55□□□□□ -1.84
RBFOX2-207ENST00000414461 TNP1P09430 55 aa3.53□□□□□ -1.84
RBFOX2-207ENST00000414461 INE1O15225 51 aa3.5□□□□□ -1.85
RBFOX2-207ENST00000414461 NEBP20929 6669 aa3.47□□□□□ -1.85
RBFOX2-207ENST00000414461 KRTAP19-6Q3LI70 58 aa3.44□□□□□ -1.86
RBFOX2-207ENST00000414461 KRTAP6-3Q3LI67 103 aa3.4□□□□□ -1.87
RBFOX2-207ENST00000414461 SPRR2GQ9BYE4 73 aa3.4□□□□□ -1.87
RBFOX2-207ENST00000414461 MUC12Q9UKN1 5478 aa3.4□□□□□ -1.87
RBFOX2-207ENST00000414461 MT1BP07438 61 aa3.36□□□□□ -1.87
RBFOX2-207ENST00000414461 KRTAP19-8Q3LI54 63 aa3.36□□□□□ -1.87
RBFOX2-207ENST00000414461 MDN1Q9NU22 5596 aa3.28□□□□□ -1.88
RBFOX2-207ENST00000414461 KRTAP10-5P60370 271 aa3.26□□□□□ -1.89
RBFOX2-207ENST00000414461 KRTAP20-1Q3LI63 56 aa3.24□□□□□ -1.89
RBFOX2-207ENST00000414461 KMT2DO14686 5537 aa3.24□□□□□ -1.89
RBFOX2-207ENST00000414461 KRTAP8-1Q8IUC2 63 aa3.23□□□□□ -1.89
RBFOX2-207ENST00000414461 MT1XP80297 61 aa3.19□□□□□ -1.9
RBFOX2-207ENST00000414461 LCE3AQ5TA76 89 aa3.19□□□□□ -1.9
RBFOX2-207ENST00000414461 KRTAP9-6A8MVA2 160 aa3.18□□□□□ -1.9
RBFOX2-207ENST00000414461 KRTAP2-3P0C7H8 128 aa3.1□□□□□ -1.91
RBFOX2-207ENST00000414461 KRTAP2-4Q9BYR9 128 aa3.1□□□□□ -1.91
RBFOX2-207ENST00000414461 KRTAP12-3P60328 96 aa3.09□□□□□ -1.91
RBFOX2-207ENST00000414461 KRTAP10-12P60413 245 aa3.07□□□□□ -1.92
RBFOX2-207ENST00000414461 MT3P25713 68 aa3.06□□□□□ -1.92
RBFOX2-207ENST00000414461 SPRR2FQ96RM1 72 aa3.05□□□□□ -1.92
RBFOX2-207ENST00000414461 SPRR2EP22531 72 aa3.04□□□□□ -1.92
RBFOX2-207ENST00000414461 SPRR2BP35325 72 aa3.04□□□□□ -1.92
RBFOX2-207ENST00000414461 SPRR2AP35326 72 aa3.04□□□□□ -1.92
RBFOX2-207ENST00000414461 GPR98Q8WXG9 6306 aa2.99□□□□□ -1.93
RBFOX2-207ENST00000414461 KRTAP2-1Q9BYU5 128 aa2.99□□□□□ -1.93
RBFOX2-207ENST00000414461 SPRR2DP22532 72 aa2.94□□□□□ -1.94
RBFOX2-207ENST00000414461 LCE3CQ5T5A8 94 aa2.93□□□□□ -1.94
RBFOX2-207ENST00000414461 DSTQ03001 7570 aaKnown RBP2.88□□□□□ -1.95
RBFOX2-207ENST00000414461 KRTAP19-7Q3SYF9 63 aa2.83□□□□□ -1.96
RBFOX2-207ENST00000414461 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
RBFOX2-207ENST00000414461 KRTAP19-5Q3LI72 72 aa2.82□□□□□ -1.96
RBFOX2-207ENST00000414461 MT1EP04732 61 aa2.82□□□□□ -1.96
RBFOX2-207ENST00000414461 KRTAP19-3Q7Z4W3 81 aa2.77□□□□□ -1.97
RBFOX2-207ENST00000414461 MT1GP13640 62 aa2.71□□□□□ -1.98
RBFOX2-207ENST00000414461 MT1LQ93083 61 aa2.71□□□□□ -1.98
RBFOX2-207ENST00000414461 AHNAK2Q8IVF2 5795 aa2.69□□□□□ -1.98
RBFOX2-207ENST00000414461 MT1MQ8N339 61 aa2.68□□□□□ -1.98
RBFOX2-207ENST00000414461 MT4P47944 62 aa2.59□□□□□ -1.99
RBFOX2-207ENST00000414461 KRTAP12-4P60329 112 aa2.56□□□□□ -2
RBFOX2-207ENST00000414461 KRTAP5-10Q6L8G5 202 aa2.54□□□□□ -2
RBFOX2-207ENST00000414461 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
RBFOX2-207ENST00000414461 LCE1BQ5T7P3 118 aa2.49□□□□□ -2.01
RBFOX2-207ENST00000414461 KRTAP5-7Q6L8G8 165 aa2.47□□□□□ -2.01
RBFOX2-207ENST00000414461 MT1AP04731 61 aa2.45□□□□□ -2.02
RBFOX2-207ENST00000414461 KRTAP5-5Q701N2 237 aaPredicted RBP2.45□□□□□ -2.02
RBFOX2-207ENST00000414461 LCE3EQ5T5B0 92 aa2.42□□□□□ -2.02
RBFOX2-207ENST00000414461 KRTAP20-2Q3LI61 65 aa2.37□□□□□ -2.03
RBFOX2-207ENST00000414461 SYNE1Q8NF91 8797 aaKnown RBP2.34□□□□□ -2.03
RBFOX2-207ENST00000414461 LCE3DQ9BYE3 92 aa2.31□□□□□ -2.04
RBFOX2-207ENST00000414461 KRTAP6-1Q3LI64 71 aa2.3□□□□□ -2.04
RBFOX2-207ENST00000414461 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
RBFOX2-207ENST00000414461 PRM1P04553 51 aa2.26□□□□□ -2.05
RBFOX2-207ENST00000414461 MUC5ACP98088 5654 aa2.24□□□□□ -2.05
RBFOX2-207ENST00000414461 MUC5BQ9HC84 5762 aaPredicted RBP2.23□□□□□ -2.05
RBFOX2-207ENST00000414461 KRTAP6-2Q3LI66 62 aa2.18□□□□□ -2.06
RBFOX2-207ENST00000414461 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
RBFOX2-207ENST00000414461 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
RBFOX2-207ENST00000414461 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
RBFOX2-207ENST00000414461 PHGR1C9JFL3 82 aa1.49□□□□□ -2.17
RBFOX2-207ENST00000414461 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 154.5 ms