RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 KRTAP9-9Q9BYP9 154 aa4.61□□□□□ -1.67
LITAF-203ENST00000413364 KRTAP9-4Q9BYQ2 154 aa4.61□□□□□ -1.67
LITAF-203ENST00000413364 MT1EP04732 61 aa4.59□□□□□ -1.67
LITAF-203ENST00000413364 LOC100996750A0A140TA64 210 aa4.56□□□□□ -1.68
LITAF-203ENST00000413364 KRTAP2-3P0C7H8 128 aa4.56□□□□□ -1.68
LITAF-203ENST00000413364 KRTAP4-6Q9BYQ5 205 aa4.56□□□□□ -1.68
LITAF-203ENST00000413364 KRTAP2-4Q9BYR9 128 aa4.56□□□□□ -1.68
LITAF-203ENST00000413364 KRTAP2-1Q9BYU5 128 aa4.56□□□□□ -1.68
LITAF-203ENST00000413364 MT1LQ93083 61 aa4.55□□□□□ -1.68
LITAF-203ENST00000413364 KRTAP4-12Q9BQ66 201 aa4.52□□□□□ -1.69
LITAF-203ENST00000413364 KRTAP4-7Q9BYR0 210 aa4.46□□□□□ -1.7
LITAF-203ENST00000413364 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.44□□□□□ -1.7
LITAF-203ENST00000413364 KRTAP9-6A8MVA2 160 aa4.43□□□□□ -1.7
LITAF-203ENST00000413364 MACF1Q9UPN3 7388 aaKnown RBP4.42□□□□□ -1.7
LITAF-203ENST00000413364 KRTAP19-3Q7Z4W3 81 aa4.35□□□□□ -1.71
LITAF-203ENST00000413364 MT1GP13640 62 aa4.33□□□□□ -1.72
LITAF-203ENST00000413364 SYNE2Q8WXH0 6885 aaKnown RBP4.31□□□□□ -1.72
LITAF-203ENST00000413364 LCE5AQ5TCM9 118 aa4.3□□□□□ -1.72
LITAF-203ENST00000413364 MT1MQ8N339 61 aa4.3□□□□□ -1.72
LITAF-203ENST00000413364 LCE3BQ5TA77 95 aa4.3□□□□□ -1.72
LITAF-203ENST00000413364 SPRR2FQ96RM1 72 aa4.3□□□□□ -1.72
LITAF-203ENST00000413364 MUC12Q9UKN1 5478 aa4.29□□□□□ -1.72
LITAF-203ENST00000413364 KRTAP4-3Q9BYR4 195 aa4.26□□□□□ -1.73
LITAF-203ENST00000413364 KRTAP5-9P26371 169 aa4.19□□□□□ -1.74
LITAF-203ENST00000413364 KRTAP12-4P60329 112 aa4.19□□□□□ -1.74
LITAF-203ENST00000413364 KRTAP6-3Q3LI67 103 aa4.18□□□□□ -1.74
LITAF-203ENST00000413364 MDN1Q9NU22 5596 aa4.08□□□□□ -1.76
LITAF-203ENST00000413364 LCE1AQ5T7P2 110 aa4.07□□□□□ -1.76
LITAF-203ENST00000413364 KRTAP2-2Q9BYT5 123 aa4.07□□□□□ -1.76
LITAF-203ENST00000413364 SPRR2EP22531 72 aa4.03□□□□□ -1.76
LITAF-203ENST00000413364 SPRR2BP35325 72 aa4.03□□□□□ -1.76
LITAF-203ENST00000413364 SPRR2AP35326 72 aa4.03□□□□□ -1.76
LITAF-203ENST00000413364 LCE1DQ5T752 114 aa3.98□□□□□ -1.77
LITAF-203ENST00000413364 DSTQ03001 7570 aaKnown RBP3.94□□□□□ -1.78
LITAF-203ENST00000413364 NEBP20929 6669 aa3.93□□□□□ -1.78
LITAF-203ENST00000413364 SPRR2DP22532 72 aa3.88□□□□□ -1.79
LITAF-203ENST00000413364 MT1AP04731 61 aa3.85□□□□□ -1.79
LITAF-203ENST00000413364 KRTAP5-5Q701N2 237 aaPredicted RBP3.85□□□□□ -1.79
LITAF-203ENST00000413364 KRTAP6-1Q3LI64 71 aa3.83□□□□□ -1.8
LITAF-203ENST00000413364 KRTAP4-9Q9BYQ8 210 aa3.79□□□□□ -1.8
LITAF-203ENST00000413364 KRTAP4-11Q9BYQ6 195 aa3.78□□□□□ -1.8
LITAF-203ENST00000413364 PRM1P04553 51 aa3.78□□□□□ -1.8
LITAF-203ENST00000413364 KRTAP5-3Q6L8H2 238 aa3.78□□□□□ -1.8
LITAF-203ENST00000413364 HMCN1Q96RW7 5635 aa3.75□□□□□ -1.81
LITAF-203ENST00000413364 KRTAP20-1Q3LI63 56 aa3.68□□□□□ -1.82
LITAF-203ENST00000413364 LCE3EQ5T5B0 92 aa3.65□□□□□ -1.83
LITAF-203ENST00000413364 KRTAP4-2Q9BYR5 136 aa3.65□□□□□ -1.83
LITAF-203ENST00000413364 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
LITAF-203ENST00000413364 LCE3DQ9BYE3 92 aa3.61□□□□□ -1.83
LITAF-203ENST00000413364 LCE1EQ5T753 118 aa3.6□□□□□ -1.83
LITAF-203ENST00000413364 SYNE1Q8NF91 8797 aaKnown RBP3.6□□□□□ -1.83
LITAF-203ENST00000413364 KRTAP5-4Q6L8H1 288 aa3.54□□□□□ -1.84
LITAF-203ENST00000413364 KRTAP6-2Q3LI66 62 aa3.48□□□□□ -1.85
LITAF-203ENST00000413364 MT3P25713 68 aa3.47□□□□□ -1.85
LITAF-203ENST00000413364 MT4P47944 62 aa3.4□□□□□ -1.87
LITAF-203ENST00000413364 KRTAP20-2Q3LI61 65 aa3.3□□□□□ -1.88
LITAF-203ENST00000413364 KRTAP5-2Q701N4 177 aa3.26□□□□□ -1.89
LITAF-203ENST00000413364 OBSCNQ5VST9 7968 aa3.16□□□□□ -1.9
LITAF-203ENST00000413364 AHNAK2Q8IVF2 5795 aa2.98□□□□□ -1.93
LITAF-203ENST00000413364 KRTAP5-10Q6L8G5 202 aa2.86□□□□□ -1.95
LITAF-203ENST00000413364 MUC5ACP98088 5654 aa2.84□□□□□ -1.95
LITAF-203ENST00000413364 GPR98Q8WXG9 6306 aa2.82□□□□□ -1.96
LITAF-203ENST00000413364 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
LITAF-203ENST00000413364 KRTAP5-1Q6L8H4 278 aa2.78□□□□□ -1.96
LITAF-203ENST00000413364 KRTAP5-8O75690 187 aa2.76□□□□□ -1.97
LITAF-203ENST00000413364 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
LITAF-203ENST00000413364 KRTAP5-7Q6L8G8 165 aa2.67□□□□□ -1.98
LITAF-203ENST00000413364 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.66□□□□□ -1.98
LITAF-203ENST00000413364 KRTAP5-11Q6L8G4 156 aa2.63□□□□□ -1.99
LITAF-203ENST00000413364 MUC5BQ9HC84 5762 aaPredicted RBP2.53□□□□□ -2.01
LITAF-203ENST00000413364 KRTAP21-1Q3LI58 79 aa2.51□□□□□ -2.01
LITAF-203ENST00000413364 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
LITAF-203ENST00000413364 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
LITAF-203ENST00000413364 AHNAKQ09666 5890 aaKnown RBP2.27□□□□□ -2.05
LITAF-203ENST00000413364 KRTAP4-4Q9BYR3 166 aa2.22□□□□□ -2.05
LITAF-203ENST00000413364 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
LITAF-203ENST00000413364 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 82.8 ms