RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 KRTAP4-3Q9BYR4 195 aa4.64□□□□□ -1.67
NUB1-201ENST00000413040 MUC12Q9UKN1 5478 aa4.64□□□□□ -1.67
NUB1-201ENST00000413040 FCGBPQ9Y6R7 5405 aaPredicted RBP4.62□□□□□ -1.67
NUB1-201ENST00000413040 LOC100996750A0A140TA64 210 aa4.61□□□□□ -1.67
NUB1-201ENST00000413040 DSTQ03001 7570 aaKnown RBP4.61□□□□□ -1.67
NUB1-201ENST00000413040 KRTAP2-3P0C7H8 128 aa4.59□□□□□ -1.67
NUB1-201ENST00000413040 KRTAP2-4Q9BYR9 128 aa4.59□□□□□ -1.67
NUB1-201ENST00000413040 KRTAP2-1Q9BYU5 128 aa4.59□□□□□ -1.67
NUB1-201ENST00000413040 MT1GP13640 62 aa4.57□□□□□ -1.68
NUB1-201ENST00000413040 KRTAP19-4Q3LI73 84 aa4.56□□□□□ -1.68
NUB1-201ENST00000413040 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.51□□□□□ -1.69
NUB1-201ENST00000413040 KRTAP9-7A8MTY7 169 aa4.49□□□□□ -1.69
NUB1-201ENST00000413040 KRTAP19-3Q7Z4W3 81 aa4.48□□□□□ -1.69
NUB1-201ENST00000413040 MT1MQ8N339 61 aa4.47□□□□□ -1.69
NUB1-201ENST00000413040 SPRR2FQ96RM1 72 aa4.45□□□□□ -1.7
NUB1-201ENST00000413040 SYNE1Q8NF91 8797 aaKnown RBP4.38□□□□□ -1.71
NUB1-201ENST00000413040 MACF1Q9UPN3 7388 aaKnown RBP4.33□□□□□ -1.72
NUB1-201ENST00000413040 LCE5AQ5TCM9 118 aa4.28□□□□□ -1.72
NUB1-201ENST00000413040 LCE3BQ5TA77 95 aa4.26□□□□□ -1.73
NUB1-201ENST00000413040 KRTAP6-3Q3LI67 103 aa4.24□□□□□ -1.73
NUB1-201ENST00000413040 KRTAP12-4P60329 112 aa4.23□□□□□ -1.73
NUB1-201ENST00000413040 SYNE2Q8WXH0 6885 aaKnown RBP4.22□□□□□ -1.73
NUB1-201ENST00000413040 KRTAP4-9Q9BYQ8 210 aa4.18□□□□□ -1.74
NUB1-201ENST00000413040 OBSCNQ5VST9 7968 aa4.17□□□□□ -1.74
NUB1-201ENST00000413040 MDN1Q9NU22 5596 aa4.14□□□□□ -1.75
NUB1-201ENST00000413040 KRTAP6-1Q3LI64 71 aa4.09□□□□□ -1.75
NUB1-201ENST00000413040 LCE1AQ5T7P2 110 aa4.03□□□□□ -1.76
NUB1-201ENST00000413040 SPRR2EP22531 72 aa4.03□□□□□ -1.76
NUB1-201ENST00000413040 SPRR2BP35325 72 aa4.03□□□□□ -1.76
NUB1-201ENST00000413040 SPRR2AP35326 72 aa4.03□□□□□ -1.76
NUB1-201ENST00000413040 MT1AP04731 61 aa3.98□□□□□ -1.77
NUB1-201ENST00000413040 KRTAP5-9P26371 169 aa3.98□□□□□ -1.77
NUB1-201ENST00000413040 NEBP20929 6669 aa3.97□□□□□ -1.77
NUB1-201ENST00000413040 KRTAP20-1Q3LI63 56 aa3.96□□□□□ -1.77
NUB1-201ENST00000413040 LCE3DQ9BYE3 92 aa3.94□□□□□ -1.78
NUB1-201ENST00000413040 LCE3EQ5T5B0 92 aa3.87□□□□□ -1.79
NUB1-201ENST00000413040 SPRR2DP22532 72 aa3.84□□□□□ -1.8
NUB1-201ENST00000413040 KRTAP5-5Q701N2 237 aaPredicted RBP3.83□□□□□ -1.8
NUB1-201ENST00000413040 KRTAP9-4Q9BYQ2 154 aa3.75□□□□□ -1.81
NUB1-201ENST00000413040 PRM1P04553 51 aa3.74□□□□□ -1.81
NUB1-201ENST00000413040 KRTAP2-2Q9BYT5 123 aa3.72□□□□□ -1.81
NUB1-201ENST00000413040 KRTAP6-2Q3LI66 62 aa3.69□□□□□ -1.82
NUB1-201ENST00000413040 MT3P25713 68 aa3.62□□□□□ -1.83
NUB1-201ENST00000413040 LCE1FQ5T754 118 aa3.52□□□□□ -1.85
NUB1-201ENST00000413040 MT4P47944 62 aa3.48□□□□□ -1.85
NUB1-201ENST00000413040 KRTAP4-6Q9BYQ5 205 aa3.43□□□□□ -1.86
NUB1-201ENST00000413040 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
NUB1-201ENST00000413040 KRTAP5-4Q6L8H1 288 aa3.35□□□□□ -1.87
NUB1-201ENST00000413040 KRTAP9-9Q9BYP9 154 aa3.33□□□□□ -1.88
NUB1-201ENST00000413040 LCE4AQ5TA78 99 aa3.31□□□□□ -1.88
NUB1-201ENST00000413040 GPR98Q8WXG9 6306 aa3.31□□□□□ -1.88
NUB1-201ENST00000413040 KRTAP20-2Q3LI61 65 aa3.26□□□□□ -1.89
NUB1-201ENST00000413040 LCE1DQ5T752 114 aa3.23□□□□□ -1.89
NUB1-201ENST00000413040 HMCN1Q96RW7 5635 aa3.15□□□□□ -1.9
NUB1-201ENST00000413040 KRTAP5-2Q701N4 177 aa3.12□□□□□ -1.91
NUB1-201ENST00000413040 LCE1BQ5T7P3 118 aa3.08□□□□□ -1.92
NUB1-201ENST00000413040 KRTAP5-10Q6L8G5 202 aa3.08□□□□□ -1.92
NUB1-201ENST00000413040 AHNAK2Q8IVF2 5795 aa3.06□□□□□ -1.92
NUB1-201ENST00000413040 MUC5ACP98088 5654 aa3.04□□□□□ -1.92
NUB1-201ENST00000413040 KRTAP5-3Q6L8H2 238 aa3.03□□□□□ -1.92
NUB1-201ENST00000413040 KRTAP5-7Q6L8G8 165 aa3.02□□□□□ -1.93
NUB1-201ENST00000413040 KRTAP4-11Q9BYQ6 195 aa2.87□□□□□ -1.95
NUB1-201ENST00000413040 KRTAP4-2Q9BYR5 136 aa2.77□□□□□ -1.97
NUB1-201ENST00000413040 KRTAP5-1Q6L8H4 278 aa2.71□□□□□ -1.98
NUB1-201ENST00000413040 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
NUB1-201ENST00000413040 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
NUB1-201ENST00000413040 KRTAP5-8O75690 187 aa2.65□□□□□ -1.99
NUB1-201ENST00000413040 AHNAKQ09666 5890 aaKnown RBP2.61□□□□□ -1.99
NUB1-201ENST00000413040 MUC5BQ9HC84 5762 aaPredicted RBP2.59□□□□□ -1.99
NUB1-201ENST00000413040 KRTAP21-2Q3LI59 83 aa2.57□□□□□ -2
NUB1-201ENST00000413040 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
NUB1-201ENST00000413040 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.48□□□□□ -2.01
NUB1-201ENST00000413040 KRTAP4-12Q9BQ66 201 aa2.44□□□□□ -2.02
NUB1-201ENST00000413040 KRTAP5-11Q6L8G4 156 aa2.32□□□□□ -2.04
NUB1-201ENST00000413040 KRTAP21-1Q3LI58 79 aa2.22□□□□□ -2.05
NUB1-201ENST00000413040 PHGR1C9JFL3 82 aa2.02□□□□□ -2.09
NUB1-201ENST00000413040 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 69.5 ms