RNA–Protein interactions for RNA: ENST00000410038.5

LIMS2-209, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-209ENST00000410038 SPRR2FQ96RM1 72 aa5.54□□□□□ -1.52
LIMS2-209ENST00000410038 SPRR2EP22531 72 aa5.52□□□□□ -1.53
LIMS2-209ENST00000410038 SPRR2BP35325 72 aa5.52□□□□□ -1.53
LIMS2-209ENST00000410038 SPRR2AP35326 72 aa5.52□□□□□ -1.53
LIMS2-209ENST00000410038 KRTAP2-2Q9BYT5 123 aa5.43□□□□□ -1.54
LIMS2-209ENST00000410038 KRTAP2-1Q9BYU5 128 aa5.43□□□□□ -1.54
LIMS2-209ENST00000410038 LCE3AQ5TA76 89 aa5.41□□□□□ -1.54
LIMS2-209ENST00000410038 LCE1AQ5T7P2 110 aa5.4□□□□□ -1.54
LIMS2-209ENST00000410038 KRTAP19-7Q3SYF9 63 aa5.37□□□□□ -1.55
LIMS2-209ENST00000410038 SPRR2DP22532 72 aa5.35□□□□□ -1.55
LIMS2-209ENST00000410038 KRTAP19-5Q3LI72 72 aa5.34□□□□□ -1.56
LIMS2-209ENST00000410038 MT1EP04732 61 aa5.3□□□□□ -1.56
LIMS2-209ENST00000410038 KRTAP23-1A1A580 65 aa5.24□□□□□ -1.57
LIMS2-209ENST00000410038 LCE3BQ5TA77 95 aa5.21□□□□□ -1.57
LIMS2-209ENST00000410038 KRTAP12-3P60328 96 aa5.2□□□□□ -1.58
LIMS2-209ENST00000410038 KRTAP19-3Q7Z4W3 81 aa5.18□□□□□ -1.58
LIMS2-209ENST00000410038 LCE5AQ5TCM9 118 aa5.14□□□□□ -1.59
LIMS2-209ENST00000410038 MT1LQ93083 61 aa5.13□□□□□ -1.59
LIMS2-209ENST00000410038 PP632Q6XCG6 107 aa5.12□□□□□ -1.59
LIMS2-209ENST00000410038 MT1GP13640 62 aa5.09□□□□□ -1.59
LIMS2-209ENST00000410038 MT1MQ8N339 61 aa5.02□□□□□ -1.61
LIMS2-209ENST00000410038 DSTQ03001 7570 aaKnown RBP4.97□□□□□ -1.61
LIMS2-209ENST00000410038 GPR98Q8WXG9 6306 aa4.95□□□□□ -1.62
LIMS2-209ENST00000410038 SPRR5A0A1B0GTR4 108 aa4.92□□□□□ -1.62
LIMS2-209ENST00000410038 KRTAP4-7Q9BYR0 210 aa4.92□□□□□ -1.62
LIMS2-209ENST00000410038 KRTAP4-3Q9BYR4 195 aa4.91□□□□□ -1.62
LIMS2-209ENST00000410038 KRTAP19-4Q3LI73 84 aa4.89□□□□□ -1.63
LIMS2-209ENST00000410038 KRTAP4-9Q9BYQ8 210 aa4.85□□□□□ -1.63
LIMS2-209ENST00000410038 INE1O15225 51 aa4.83□□□□□ -1.64
LIMS2-209ENST00000410038 LCE3CQ5T5A8 94 aa4.83□□□□□ -1.64
LIMS2-209ENST00000410038 LCE4AQ5TA78 99 aa4.76□□□□□ -1.65
LIMS2-209ENST00000410038 LCE1DQ5T752 114 aa4.75□□□□□ -1.65
LIMS2-209ENST00000410038 MT4P47944 62 aa4.66□□□□□ -1.66
LIMS2-209ENST00000410038 HMCN1Q96RW7 5635 aa4.65□□□□□ -1.67
LIMS2-209ENST00000410038 LOC100996750A0A140TA64 210 aa4.64□□□□□ -1.67
LIMS2-209ENST00000410038 KRTAP5-4Q6L8H1 288 aa4.59□□□□□ -1.67
LIMS2-209ENST00000410038 AHNAK2Q8IVF2 5795 aa4.58□□□□□ -1.68
LIMS2-209ENST00000410038 KRTAP5-5Q701N2 237 aaPredicted RBP4.57□□□□□ -1.68
LIMS2-209ENST00000410038 KRTAP9-6A8MVA2 160 aa4.57□□□□□ -1.68
LIMS2-209ENST00000410038 KRTAP5-10Q6L8G5 202 aa4.54□□□□□ -1.68
LIMS2-209ENST00000410038 KRTAP4-6Q9BYQ5 205 aa4.48□□□□□ -1.69
LIMS2-209ENST00000410038 KRTAP5-7Q6L8G8 165 aa4.43□□□□□ -1.7
LIMS2-209ENST00000410038 KRTAP5-3Q6L8H2 238 aa4.39□□□□□ -1.71
LIMS2-209ENST00000410038 MT1AP04731 61 aa4.36□□□□□ -1.71
LIMS2-209ENST00000410038 SYNE1Q8NF91 8797 aaKnown RBP4.36□□□□□ -1.71
LIMS2-209ENST00000410038 KRTAP12-4P60329 112 aa4.33□□□□□ -1.72
LIMS2-209ENST00000410038 KRTAP20-2Q3LI61 65 aa4.33□□□□□ -1.72
LIMS2-209ENST00000410038 KRTAP6-1Q3LI64 71 aa4.33□□□□□ -1.72
LIMS2-209ENST00000410038 KRTAP9-4Q9BYQ2 154 aa4.18□□□□□ -1.74
LIMS2-209ENST00000410038 KRTAP5-2Q701N4 177 aa4.06□□□□□ -1.76
LIMS2-209ENST00000410038 KRTAP6-2Q3LI66 62 aa4.06□□□□□ -1.76
LIMS2-209ENST00000410038 KRTAP4-11Q9BYQ6 195 aa4.02□□□□□ -1.77
LIMS2-209ENST00000410038 MT3P25713 68 aa3.97□□□□□ -1.77
LIMS2-209ENST00000410038 KRTAP5-8O75690 187 aa3.87□□□□□ -1.79
LIMS2-209ENST00000410038 AHNAKQ09666 5890 aaKnown RBP3.85□□□□□ -1.79
LIMS2-209ENST00000410038 OBSCNQ5VST9 7968 aa3.84□□□□□ -1.8
LIMS2-209ENST00000410038 MUC5ACP98088 5654 aa3.83□□□□□ -1.8
LIMS2-209ENST00000410038 MUC5BQ9HC84 5762 aaPredicted RBP3.78□□□□□ -1.8
LIMS2-209ENST00000410038 KRTAP9-9Q9BYP9 154 aa3.76□□□□□ -1.81
LIMS2-209ENST00000410038 KRTAP5-1Q6L8H4 278 aa3.59□□□□□ -1.83
LIMS2-209ENST00000410038 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
LIMS2-209ENST00000410038 LCE3DQ9BYE3 92 aa3.55□□□□□ -1.84
LIMS2-209ENST00000410038 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.86
LIMS2-209ENST00000410038 KRTAP4-2Q9BYR5 136 aa3.33□□□□□ -1.88
LIMS2-209ENST00000410038 LCE1BQ5T7P3 118 aa3.32□□□□□ -1.88
LIMS2-209ENST00000410038 LCE1CQ5T751 118 aa3.3□□□□□ -1.88
LIMS2-209ENST00000410038 PRM1P04553 51 aa3.11□□□□□ -1.91
LIMS2-209ENST00000410038 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.06□□□□□ -1.92
LIMS2-209ENST00000410038 KRTAP5-11Q6L8G4 156 aa2.95□□□□□ -1.94
LIMS2-209ENST00000410038 KRTAP4-12Q9BQ66 201 aa2.92□□□□□ -1.94
LIMS2-209ENST00000410038 LCE1FQ5T754 118 aa2.9□□□□□ -1.95
LIMS2-209ENST00000410038 KRTAP21-2Q3LI59 83 aa2.85□□□□□ -1.95
LIMS2-209ENST00000410038 PHGR1C9JFL3 82 aa2.66□□□□□ -1.98
LIMS2-209ENST00000410038 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
LIMS2-209ENST00000410038 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
LIMS2-209ENST00000410038 KRTAP21-1Q3LI58 79 aa2.1□□□□□ -2.07
LIMS2-209ENST00000410038 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 134 ms