RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 CCDC179H3BU77 68 aa5.03□□□□□ -1.6
MCF2L-210ENST00000409954 RPS28P62857 69 aaKnown RBP5.02□□□□□ -1.61
MCF2L-210ENST00000409954 KRTAP5-4Q6L8H1 288 aa5.02□□□□□ -1.61
MCF2L-210ENST00000409954 PRR15LQ9BU68 103 aa5.01□□□□□ -1.61
MCF2L-210ENST00000409954 KRTAP4-3Q9BYR4 195 aa5□□□□□ -1.61
MCF2L-210ENST00000409954 HMCN1Q96RW7 5635 aa4.98□□□□□ -1.61
MCF2L-210ENST00000409954 KRTAP4-6Q9BYQ5 205 aa4.92□□□□□ -1.62
MCF2L-210ENST00000409954 KRTAP12-3P60328 96 aa4.91□□□□□ -1.62
MCF2L-210ENST00000409954 ATP5EP56381 51 aaPredicted RBP4.9□□□□□ -1.63
MCF2L-210ENST00000409954 LINC01558Q9Y6Z2 57 aa4.9□□□□□ -1.63
MCF2L-210ENST00000409954 KRTAP5-10Q6L8G5 202 aa4.86□□□□□ -1.63
MCF2L-210ENST00000409954 KRTAP4-7Q9BYR0 210 aa4.85□□□□□ -1.63
MCF2L-210ENST00000409954 UQCR11O14957 56 aa4.84□□□□□ -1.63
MCF2L-210ENST00000409954 PRO0628Q9UI54 55 aa4.84□□□□□ -1.63
MCF2L-210ENST00000409954 AHNAK2Q8IVF2 5795 aa4.84□□□□□ -1.63
MCF2L-210ENST00000409954 TMEM258P61165 79 aa4.82□□□□□ -1.64
MCF2L-210ENST00000409954 KRTAP25-1Q3LHN0 102 aa4.76□□□□□ -1.65
MCF2L-210ENST00000409954 KRTAP19-4Q3LI73 84 aa4.76□□□□□ -1.65
MCF2L-210ENST00000409954 V9GYY9 64 aa4.75□□□□□ -1.65
MCF2L-210ENST00000409954 SPRR5A0A1B0GTR4 108 aa4.74□□□□□ -1.65
MCF2L-210ENST00000409954 KRTAP12-4P60329 112 aa4.73□□□□□ -1.65
MCF2L-210ENST00000409954 KRTAP20-2Q3LI61 65 aa4.73□□□□□ -1.65
MCF2L-210ENST00000409954 KRTAP5-3Q6L8H2 238 aa4.73□□□□□ -1.65
MCF2L-210ENST00000409954 KRTAP5-5Q701N2 237 aaPredicted RBP4.73□□□□□ -1.65
MCF2L-210ENST00000409954 KRTAP5-7Q6L8G8 165 aa4.71□□□□□ -1.66
MCF2L-210ENST00000409954 K7ERS5 55 aa4.69□□□□□ -1.66
MCF2L-210ENST00000409954 MIR22HGQ0VDD5 57 aa4.68□□□□□ -1.66
MCF2L-210ENST00000409954 KRTAP23-1A1A580 65 aa4.62□□□□□ -1.67
MCF2L-210ENST00000409954 LOC100996750A0A140TA64 210 aa4.6□□□□□ -1.67
MCF2L-210ENST00000409954 PMAIP1Q13794 54 aa4.56□□□□□ -1.68
MCF2L-210ENST00000409954 KRTAP15-1Q3LI76 137 aa4.56□□□□□ -1.68
MCF2L-210ENST00000409954 SYNE1Q8NF91 8797 aaKnown RBP4.53□□□□□ -1.68
MCF2L-210ENST00000409954 LCE3CQ5T5A8 94 aa4.52□□□□□ -1.69
MCF2L-210ENST00000409954 BRK1Q8WUW1 75 aa4.51□□□□□ -1.69
MCF2L-210ENST00000409954 PSPHP1O15172 72 aa4.47□□□□□ -1.69
MCF2L-210ENST00000409954 Q1T7F1 81 aa4.46□□□□□ -1.7
MCF2L-210ENST00000409954 MT1AP04731 61 aa4.38□□□□□ -1.71
MCF2L-210ENST00000409954 KTN1-AS1Q86SY8 53 aa4.38□□□□□ -1.71
MCF2L-210ENST00000409954 KRTAP4-11Q9BYQ6 195 aa4.38□□□□□ -1.71
MCF2L-210ENST00000409954 CDC42SE1Q9NRR8 79 aa4.37□□□□□ -1.71
MCF2L-210ENST00000409954 KRTAP5-2Q701N4 177 aa4.36□□□□□ -1.71
MCF2L-210ENST00000409954 A6NED7 52 aa4.34□□□□□ -1.71
MCF2L-210ENST00000409954 KRTAP6-1Q3LI64 71 aa4.34□□□□□ -1.71
MCF2L-210ENST00000409954 ROMO1P60602 79 aa4.29□□□□□ -1.72
MCF2L-210ENST00000409954 KRTAP9-4Q9BYQ2 154 aa4.28□□□□□ -1.72
MCF2L-210ENST00000409954 H3BS24 57 aa4.25□□□□□ -1.73
MCF2L-210ENST00000409954 KRTAP5-8O75690 187 aa4.21□□□□□ -1.74
MCF2L-210ENST00000409954 KRTAP9-6A8MVA2 160 aa4.2□□□□□ -1.74
MCF2L-210ENST00000409954 KRTAP6-2Q3LI66 62 aa4.19□□□□□ -1.74
MCF2L-210ENST00000409954 OBSCNQ5VST9 7968 aa4.1□□□□□ -1.75
MCF2L-210ENST00000409954 MT3P25713 68 aa4.07□□□□□ -1.76
MCF2L-210ENST00000409954 KRTAP9-9Q9BYP9 154 aa4.06□□□□□ -1.76
MCF2L-210ENST00000409954 AHNAKQ09666 5890 aaKnown RBP4.04□□□□□ -1.76
MCF2L-210ENST00000409954 MUC5ACP98088 5654 aa4.03□□□□□ -1.76
MCF2L-210ENST00000409954 MUC5BQ9HC84 5762 aaPredicted RBP4.02□□□□□ -1.77
MCF2L-210ENST00000409954 PRAC1Q96KF2 57 aa3.97□□□□□ -1.77
MCF2L-210ENST00000409954 KRTAP5-1Q6L8H4 278 aa3.94□□□□□ -1.78
MCF2L-210ENST00000409954 A0A0A0MQY5 61 aa3.8□□□□□ -1.8
MCF2L-210ENST00000409954 LCE1EQ5T753 118 aa3.78□□□□□ -1.8
MCF2L-210ENST00000409954 LCE1BQ5T7P3 118 aa3.51□□□□□ -1.85
MCF2L-210ENST00000409954 KRTAP4-2Q9BYR5 136 aa3.51□□□□□ -1.85
MCF2L-210ENST00000409954 NDUFAF8A1L188 74 aa3.5□□□□□ -1.85
MCF2L-210ENST00000409954 LCE1CQ5T751 118 aa3.49□□□□□ -1.85
MCF2L-210ENST00000409954 LUZP6Q538Z0 58 aa3.42□□□□□ -1.86
MCF2L-210ENST00000409954 LCE3DQ9BYE3 92 aa3.25□□□□□ -1.89
MCF2L-210ENST00000409954 KRTAP4-12Q9BQ66 201 aa3.22□□□□□ -1.89
MCF2L-210ENST00000409954 LCE1FQ5T754 118 aa3.15□□□□□ -1.91
MCF2L-210ENST00000409954 KRTAP5-11Q6L8G4 156 aa3.15□□□□□ -1.91
MCF2L-210ENST00000409954 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.15□□□□□ -1.91
MCF2L-210ENST00000409954 LCE3EQ5T5B0 92 aa3.03□□□□□ -1.92
MCF2L-210ENST00000409954 INE1O15225 51 aa2.95□□□□□ -1.94
MCF2L-210ENST00000409954 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
MCF2L-210ENST00000409954 PHGR1C9JFL3 82 aa2.84□□□□□ -1.95
MCF2L-210ENST00000409954 KRTAP4-4Q9BYR3 166 aa2.62□□□□□ -1.99
MCF2L-210ENST00000409954 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2
MCF2L-210ENST00000409954 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
MCF2L-210ENST00000409954 PRM1P04553 51 aa2.14□□□□□ -2.07
MCF2L-210ENST00000409954 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 87.8 ms