RNA–Protein interactions for RNA: ENST00000409252.6

SH3D19-202, Transcript of SH3 domain containing 19, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SH3D19, Length 4,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-202ENST00000409252 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.98□□□□□ -1.93
SH3D19-202ENST00000409252 KRTAP19-3Q7Z4W3 81 aa2.96□□□□□ -1.94
SH3D19-202ENST00000409252 MT1EP04732 61 aa2.95□□□□□ -1.94
SH3D19-202ENST00000409252 KRTAP6-3Q3LI67 103 aa2.92□□□□□ -1.94
SH3D19-202ENST00000409252 MT1LQ93083 61 aa2.9□□□□□ -1.94
SH3D19-202ENST00000409252 SYNE2Q8WXH0 6885 aaKnown RBP2.87□□□□□ -1.95
SH3D19-202ENST00000409252 SSPOA2VEC9 5147 aa2.84□□□□□ -1.95
SH3D19-202ENST00000409252 KRTAP19-7Q3SYF9 63 aa2.84□□□□□ -1.96
SH3D19-202ENST00000409252 LCE3BQ5TA77 95 aa2.84□□□□□ -1.96
SH3D19-202ENST00000409252 MT1MQ8N339 61 aa2.84□□□□□ -1.96
SH3D19-202ENST00000409252 KRTAP4-7Q9BYR0 210 aa2.83□□□□□ -1.96
SH3D19-202ENST00000409252 KRTAP20-1Q3LI63 56 aa2.8□□□□□ -1.96
SH3D19-202ENST00000409252 FCGBPQ9Y6R7 5405 aaPredicted RBP2.8□□□□□ -1.96
SH3D19-202ENST00000409252 MACF1Q9UPN3 7388 aaKnown RBP2.79□□□□□ -1.96
SH3D19-202ENST00000409252 KRTAP12-4P60329 112 aa2.79□□□□□ -1.96
SH3D19-202ENST00000409252 KRTAP4-3Q9BYR4 195 aa2.75□□□□□ -1.97
SH3D19-202ENST00000409252 LCE1AQ5T7P2 110 aa2.75□□□□□ -1.97
SH3D19-202ENST00000409252 KRTAP2-3P0C7H8 128 aa2.72□□□□□ -1.97
SH3D19-202ENST00000409252 KRTAP2-4Q9BYR9 128 aa2.72□□□□□ -1.97
SH3D19-202ENST00000409252 MT4P47944 62 aa2.71□□□□□ -1.98
SH3D19-202ENST00000409252 LCE5AQ5TCM9 118 aa2.68□□□□□ -1.98
SH3D19-202ENST00000409252 LOC100996750A0A140TA64 210 aa2.67□□□□□ -1.98
SH3D19-202ENST00000409252 KRTAP5-9P26371 169 aa2.67□□□□□ -1.98
SH3D19-202ENST00000409252 KMT2DO14686 5537 aa2.66□□□□□ -1.98
SH3D19-202ENST00000409252 NEBP20929 6669 aa2.64□□□□□ -1.99
SH3D19-202ENST00000409252 KRTAP2-2Q9BYT5 123 aa2.63□□□□□ -1.99
SH3D19-202ENST00000409252 KRTAP2-1Q9BYU5 128 aa2.63□□□□□ -1.99
SH3D19-202ENST00000409252 SPRR5A0A1B0GTR4 108 aa2.63□□□□□ -1.99
SH3D19-202ENST00000409252 MT1AP04731 61 aa2.54□□□□□ -2
SH3D19-202ENST00000409252 KRTAP4-9Q9BYQ8 210 aa2.54□□□□□ -2
SH3D19-202ENST00000409252 MUC12Q9UKN1 5478 aa2.54□□□□□ -2
SH3D19-202ENST00000409252 LCE4AQ5TA78 99 aa2.53□□□□□ -2
SH3D19-202ENST00000409252 MT3P25713 68 aa2.51□□□□□ -2.01
SH3D19-202ENST00000409252 SYNE1Q8NF91 8797 aaKnown RBP2.48□□□□□ -2.01
SH3D19-202ENST00000409252 MDN1Q9NU22 5596 aa2.46□□□□□ -2.02
SH3D19-202ENST00000409252 LCE3DQ9BYE3 92 aa2.45□□□□□ -2.02
SH3D19-202ENST00000409252 KRTAP9-6A8MVA2 160 aa2.45□□□□□ -2.02
SH3D19-202ENST00000409252 DSTQ03001 7570 aaKnown RBP2.44□□□□□ -2.02
SH3D19-202ENST00000409252 KRTAP6-1Q3LI64 71 aa2.44□□□□□ -2.02
SH3D19-202ENST00000409252 LCE3EQ5T5B0 92 aa2.38□□□□□ -2.03
SH3D19-202ENST00000409252 KRTAP9-4Q9BYQ2 154 aa2.38□□□□□ -2.03
SH3D19-202ENST00000409252 KRTAP6-2Q3LI66 62 aa2.37□□□□□ -2.03
SH3D19-202ENST00000409252 LCE1DQ5T752 114 aa2.35□□□□□ -2.03
SH3D19-202ENST00000409252 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
SH3D19-202ENST00000409252 KRTAP4-6Q9BYQ5 205 aa2.29□□□□□ -2.04
SH3D19-202ENST00000409252 OBSCNQ5VST9 7968 aa2.29□□□□□ -2.04
SH3D19-202ENST00000409252 KRTAP20-2Q3LI61 65 aa2.25□□□□□ -2.05
SH3D19-202ENST00000409252 KRTAP5-4Q6L8H1 288 aa2.18□□□□□ -2.06
SH3D19-202ENST00000409252 KRTAP5-5Q701N2 237 aaPredicted RBP2.16□□□□□ -2.06
SH3D19-202ENST00000409252 PRM1P04553 51 aa2.13□□□□□ -2.07
SH3D19-202ENST00000409252 GPR98Q8WXG9 6306 aa2.12□□□□□ -2.07
SH3D19-202ENST00000409252 KRTAP9-9Q9BYP9 154 aa2.07□□□□□ -2.08
SH3D19-202ENST00000409252 KRTAP4-11Q9BYQ6 195 aa2.02□□□□□ -2.09
SH3D19-202ENST00000409252 KRTAP5-3Q6L8H2 238 aa1.99□□□□□ -2.09
SH3D19-202ENST00000409252 HMCN1Q96RW7 5635 aa1.99□□□□□ -2.09
SH3D19-202ENST00000409252 MUC19Q7Z5P9 8384 aa1.89□□□□□ -2.11
SH3D19-202ENST00000409252 LCE1CQ5T751 118 aa1.88□□□□□ -2.11
SH3D19-202ENST00000409252 LCE1EQ5T753 118 aa1.88□□□□□ -2.11
SH3D19-202ENST00000409252 LCE1FQ5T754 118 aa1.88□□□□□ -2.11
SH3D19-202ENST00000409252 KRTAP5-2Q701N4 177 aa1.87□□□□□ -2.11
SH3D19-202ENST00000409252 AHNAK2Q8IVF2 5795 aa1.86□□□□□ -2.11
SH3D19-202ENST00000409252 MUC5ACP98088 5654 aa1.81□□□□□ -2.12
SH3D19-202ENST00000409252 KRTAP5-8O75690 187 aa1.8□□□□□ -2.12
SH3D19-202ENST00000409252 KRTAP4-12Q9BQ66 201 aa1.76□□□□□ -2.13
SH3D19-202ENST00000409252 KRTAP4-2Q9BYR5 136 aa1.76□□□□□ -2.13
SH3D19-202ENST00000409252 KRTAP5-10Q6L8G5 202 aa1.73□□□□□ -2.13
SH3D19-202ENST00000409252 KRTAP4-4Q9BYR3 166 aa1.65□□□□□ -2.14
SH3D19-202ENST00000409252 KRTAP5-1Q6L8H4 278 aa1.65□□□□□ -2.15
SH3D19-202ENST00000409252 KRTAP5-7Q6L8G8 165 aa1.65□□□□□ -2.15
SH3D19-202ENST00000409252 AHNAKQ09666 5890 aaKnown RBP1.63□□□□□ -2.15
SH3D19-202ENST00000409252 MUC5BQ9HC84 5762 aaPredicted RBP1.54□□□□□ -2.16
SH3D19-202ENST00000409252 KRTAP5-11Q6L8G4 156 aa1.5□□□□□ -2.17
SH3D19-202ENST00000409252 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.45□□□□□ -2.18
SH3D19-202ENST00000409252 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.18
SH3D19-202ENST00000409252 PHGR1C9JFL3 82 aa1.39□□□□□ -2.19
SH3D19-202ENST00000409252 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
SH3D19-202ENST00000409252 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 26 ms