RNA–Protein interactions for RNA: ENST00000409022.2

PTPN18-203, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 993 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-203ENST00000409022 TNP1P09430 55 aa6.77□□□□□ -1.33
PTPN18-203ENST00000409022 KRTAP19-5Q3LI72 72 aa6.77□□□□□ -1.33
PTPN18-203ENST00000409022 MIR22HGQ0VDD5 57 aa6.75□□□□□ -1.33
PTPN18-203ENST00000409022 DSTQ03001 7570 aaKnown RBP6.75□□□□□ -1.33
PTPN18-203ENST00000409022 PP632Q6XCG6 107 aa6.74□□□□□ -1.33
PTPN18-203ENST00000409022 MT1GP13640 62 aa6.72□□□□□ -1.33
PTPN18-203ENST00000409022 PMAIP1Q13794 54 aa6.69□□□□□ -1.34
PTPN18-203ENST00000409022 C10orf95Q9H7T3 257 aa6.67□□□□□ -1.34
PTPN18-203ENST00000409022 LOC100996750A0A140TA64 210 aa6.63□□□□□ -1.35
PTPN18-203ENST00000409022 KRTAP4-6Q9BYQ5 205 aa6.63□□□□□ -1.35
PTPN18-203ENST00000409022 GPR98Q8WXG9 6306 aa6.62□□□□□ -1.35
PTPN18-203ENST00000409022 LCE3AQ5TA76 89 aa6.62□□□□□ -1.35
PTPN18-203ENST00000409022 MT1LQ93083 61 aa6.58□□□□□ -1.36
PTPN18-203ENST00000409022 MT1MQ8N339 61 aa6.55□□□□□ -1.36
PTPN18-203ENST00000409022 KTN1-AS1Q86SY8 53 aa6.54□□□□□ -1.36
PTPN18-203ENST00000409022 K7ERS5 55 aa6.5□□□□□ -1.37
PTPN18-203ENST00000409022 KRTAP4-9Q9BYQ8 210 aa6.49□□□□□ -1.37
PTPN18-203ENST00000409022 LCE4AQ5TA78 99 aa6.43□□□□□ -1.38
PTPN18-203ENST00000409022 KRTAP12-3P60328 96 aa6.42□□□□□ -1.38
PTPN18-203ENST00000409022 KRTAP25-1Q3LHN0 102 aa6.38□□□□□ -1.39
PTPN18-203ENST00000409022 LCE1DQ5T752 114 aa6.36□□□□□ -1.39
PTPN18-203ENST00000409022 KRTAP4-3Q9BYR4 195 aa6.33□□□□□ -1.4
PTPN18-203ENST00000409022 HMCN1Q96RW7 5635 aa6.32□□□□□ -1.4
PTPN18-203ENST00000409022 MT4P47944 62 aa6.31□□□□□ -1.4
PTPN18-203ENST00000409022 KRTAP5-4Q6L8H1 288 aa6.24□□□□□ -1.41
PTPN18-203ENST00000409022 ROMO1P60602 79 aa6.2□□□□□ -1.42
PTPN18-203ENST00000409022 KRTAP4-7Q9BYR0 210 aa6.19□□□□□ -1.42
PTPN18-203ENST00000409022 KRTAP19-4Q3LI73 84 aa6.16□□□□□ -1.42
PTPN18-203ENST00000409022 KRTAP23-1A1A580 65 aa6.15□□□□□ -1.42
PTPN18-203ENST00000409022 AHNAK2Q8IVF2 5795 aa6.07□□□□□ -1.44
PTPN18-203ENST00000409022 PRAC1Q96KF2 57 aa6.07□□□□□ -1.44
PTPN18-203ENST00000409022 KRTAP15-1Q3LI76 137 aa6□□□□□ -1.45
PTPN18-203ENST00000409022 KRTAP5-5Q701N2 237 aaPredicted RBP5.99□□□□□ -1.45
PTPN18-203ENST00000409022 KRTAP12-4P60329 112 aa5.95□□□□□ -1.46
PTPN18-203ENST00000409022 SPRR5A0A1B0GTR4 108 aa5.92□□□□□ -1.46
PTPN18-203ENST00000409022 KRTAP20-2Q3LI61 65 aa5.9□□□□□ -1.46
PTPN18-203ENST00000409022 KRTAP5-10Q6L8G5 202 aa5.9□□□□□ -1.46
PTPN18-203ENST00000409022 LCE3CQ5T5A8 94 aa5.89□□□□□ -1.47
PTPN18-203ENST00000409022 SYNE1Q8NF91 8797 aaKnown RBP5.8□□□□□ -1.48
PTPN18-203ENST00000409022 KRTAP5-3Q6L8H2 238 aa5.79□□□□□ -1.48
PTPN18-203ENST00000409022 KRTAP4-12Q9BQ66 201 aa5.71□□□□□ -1.5
PTPN18-203ENST00000409022 KRTAP5-7Q6L8G8 165 aa5.7□□□□□ -1.5
PTPN18-203ENST00000409022 MT1AP04731 61 aa5.62□□□□□ -1.51
PTPN18-203ENST00000409022 KRTAP9-9Q9BYP9 154 aa5.61□□□□□ -1.51
PTPN18-203ENST00000409022 KRTAP9-4Q9BYQ2 154 aa5.61□□□□□ -1.51
PTPN18-203ENST00000409022 KRTAP6-1Q3LI64 71 aa5.54□□□□□ -1.52
PTPN18-203ENST00000409022 KRTAP9-6A8MVA2 160 aa5.46□□□□□ -1.54
PTPN18-203ENST00000409022 KRTAP5-2Q701N4 177 aa5.46□□□□□ -1.54
PTPN18-203ENST00000409022 KRTAP4-11Q9BYQ6 195 aa5.4□□□□□ -1.54
PTPN18-203ENST00000409022 KRTAP6-2Q3LI66 62 aa5.32□□□□□ -1.56
PTPN18-203ENST00000409022 KRTAP5-8O75690 187 aa5.19□□□□□ -1.58
PTPN18-203ENST00000409022 MT3P25713 68 aa5.19□□□□□ -1.58
PTPN18-203ENST00000409022 KRTAP4-2Q9BYR5 136 aa5.15□□□□□ -1.59
PTPN18-203ENST00000409022 OBSCNQ5VST9 7968 aa5.13□□□□□ -1.59
PTPN18-203ENST00000409022 LUZP6Q538Z0 58 aa5.12□□□□□ -1.59
PTPN18-203ENST00000409022 AHNAKQ09666 5890 aaKnown RBP5.08□□□□□ -1.6
PTPN18-203ENST00000409022 MUC5BQ9HC84 5762 aaPredicted RBP5.04□□□□□ -1.6
PTPN18-203ENST00000409022 NDUFAF8A1L188 74 aa5.02□□□□□ -1.61
PTPN18-203ENST00000409022 MUC5ACP98088 5654 aa4.99□□□□□ -1.61
PTPN18-203ENST00000409022 KRTAP5-1Q6L8H4 278 aa4.88□□□□□ -1.63
PTPN18-203ENST00000409022 H3BS24 57 aa4.81□□□□□ -1.64
PTPN18-203ENST00000409022 LCE1EQ5T753 118 aa4.76□□□□□ -1.65
PTPN18-203ENST00000409022 A0A0A0MQY5 61 aa4.65□□□□□ -1.67
PTPN18-203ENST00000409022 LCE1BQ5T7P3 118 aa4.46□□□□□ -1.7
PTPN18-203ENST00000409022 LCE1CQ5T751 118 aa4.4□□□□□ -1.71
PTPN18-203ENST00000409022 INE1O15225 51 aa4.38□□□□□ -1.71
PTPN18-203ENST00000409022 LCE3DQ9BYE3 92 aa4.28□□□□□ -1.72
PTPN18-203ENST00000409022 LCE3EQ5T5B0 92 aa4.03□□□□□ -1.76
PTPN18-203ENST00000409022 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.99□□□□□ -1.77
PTPN18-203ENST00000409022 KRTAP5-11Q6L8G4 156 aa3.97□□□□□ -1.77
PTPN18-203ENST00000409022 LCE1FQ5T754 118 aa3.91□□□□□ -1.78
PTPN18-203ENST00000409022 KRTAP21-2Q3LI59 83 aa3.64□□□□□ -1.83
PTPN18-203ENST00000409022 PHGR1C9JFL3 82 aa3.47□□□□□ -1.85
PTPN18-203ENST00000409022 KRTAP4-4Q9BYR3 166 aa3.32□□□□□ -1.88
PTPN18-203ENST00000409022 PRM1P04553 51 aa3.17□□□□□ -1.9
PTPN18-203ENST00000409022 MUC19Q7Z5P9 8384 aa3.16□□□□□ -1.9
PTPN18-203ENST00000409022 KRTAP21-1Q3LI58 79 aa2.67□□□□□ -1.98
PTPN18-203ENST00000409022 MUC16Q8WXI7 14507 aa2.24□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 107.2 ms