RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 KRTAP9-2Q9BYQ4 174 aa6.32□□□□□ -1.4
EWSR1-207ENST00000406548 FSIP2Q5CZC0 6907 aa6.31□□□□□ -1.4
EWSR1-207ENST00000406548 KRTAP9-6A0A140TA67 174 aa6.14□□□□□ -1.43
EWSR1-207ENST00000406548 FCGBPQ9Y6R7 5405 aaPredicted RBP6.14□□□□□ -1.43
EWSR1-207ENST00000406548 KRTAP4-3Q9BYR4 195 aa6.01□□□□□ -1.45
EWSR1-207ENST00000406548 LOC100996750A0A140TA64 210 aa5.99□□□□□ -1.45
EWSR1-207ENST00000406548 CRCT1Q9UGL9 99 aa5.98□□□□□ -1.45
EWSR1-207ENST00000406548 MT1GP13640 62 aa5.95□□□□□ -1.46
EWSR1-207ENST00000406548 MT1MQ8N339 61 aa5.95□□□□□ -1.46
EWSR1-207ENST00000406548 KRTAP19-3Q7Z4W3 81 aa5.95□□□□□ -1.46
EWSR1-207ENST00000406548 MUC12Q9UKN1 5478 aa5.87□□□□□ -1.47
EWSR1-207ENST00000406548 MACF1Q9UPN3 7388 aaKnown RBP5.78□□□□□ -1.48
EWSR1-207ENST00000406548 SPRR2FQ96RM1 72 aa5.75□□□□□ -1.49
EWSR1-207ENST00000406548 LCE5AQ5TCM9 118 aa5.73□□□□□ -1.49
EWSR1-207ENST00000406548 KRTAP5-9P26371 169 aa5.63□□□□□ -1.51
EWSR1-207ENST00000406548 SYNE2Q8WXH0 6885 aaKnown RBP5.61□□□□□ -1.51
EWSR1-207ENST00000406548 KRTAP12-4P60329 112 aa5.6□□□□□ -1.51
EWSR1-207ENST00000406548 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.56□□□□□ -1.52
EWSR1-207ENST00000406548 LCE3BQ5TA77 95 aa5.52□□□□□ -1.53
EWSR1-207ENST00000406548 DSTQ03001 7570 aaKnown RBP5.52□□□□□ -1.53
EWSR1-207ENST00000406548 KRTAP9-7A8MTY7 169 aa5.51□□□□□ -1.53
EWSR1-207ENST00000406548 LCE1AQ5T7P2 110 aa5.49□□□□□ -1.53
EWSR1-207ENST00000406548 MDN1Q9NU22 5596 aa5.44□□□□□ -1.54
EWSR1-207ENST00000406548 KRTAP6-1Q3LI64 71 aa5.41□□□□□ -1.54
EWSR1-207ENST00000406548 KRTAP6-3Q3LI67 103 aa5.4□□□□□ -1.54
EWSR1-207ENST00000406548 KRTAP4-9Q9BYQ8 210 aa5.4□□□□□ -1.55
EWSR1-207ENST00000406548 MT1AP04731 61 aa5.39□□□□□ -1.55
EWSR1-207ENST00000406548 SPRR2EP22531 72 aa5.39□□□□□ -1.55
EWSR1-207ENST00000406548 SPRR2BP35325 72 aa5.39□□□□□ -1.55
EWSR1-207ENST00000406548 SPRR2AP35326 72 aa5.39□□□□□ -1.55
EWSR1-207ENST00000406548 KRTAP4-6Q9BYQ5 205 aa5.38□□□□□ -1.55
EWSR1-207ENST00000406548 KRTAP5-5Q701N2 237 aaPredicted RBP5.27□□□□□ -1.57
EWSR1-207ENST00000406548 SYNE1Q8NF91 8797 aaKnown RBP5.26□□□□□ -1.57
EWSR1-207ENST00000406548 LCE3DQ9BYE3 92 aa5.23□□□□□ -1.57
EWSR1-207ENST00000406548 SPRR2DP22532 72 aa5.18□□□□□ -1.58
EWSR1-207ENST00000406548 LCE3EQ5T5B0 92 aa5.17□□□□□ -1.58
EWSR1-207ENST00000406548 KRTAP9-4Q9BYQ2 154 aa5.04□□□□□ -1.6
EWSR1-207ENST00000406548 NEBP20929 6669 aa5.03□□□□□ -1.6
EWSR1-207ENST00000406548 PRM1P04553 51 aa4.97□□□□□ -1.61
EWSR1-207ENST00000406548 KRTAP20-1Q3LI63 56 aa4.85□□□□□ -1.63
EWSR1-207ENST00000406548 KRTAP6-2Q3LI66 62 aa4.84□□□□□ -1.64
EWSR1-207ENST00000406548 MT3P25713 68 aa4.81□□□□□ -1.64
EWSR1-207ENST00000406548 KRTAP5-4Q6L8H1 288 aa4.76□□□□□ -1.65
EWSR1-207ENST00000406548 KRTAP2-2Q9BYT5 123 aa4.59□□□□□ -1.67
EWSR1-207ENST00000406548 LCE4AQ5TA78 99 aa4.58□□□□□ -1.68
EWSR1-207ENST00000406548 OBSCNQ5VST9 7968 aa4.52□□□□□ -1.69
EWSR1-207ENST00000406548 MT4P47944 62 aa4.52□□□□□ -1.69
EWSR1-207ENST00000406548 KRTAP20-2Q3LI61 65 aa4.44□□□□□ -1.7
EWSR1-207ENST00000406548 LCE1DQ5T752 114 aa4.41□□□□□ -1.7
EWSR1-207ENST00000406548 KRTAP5-2Q701N4 177 aa4.36□□□□□ -1.71
EWSR1-207ENST00000406548 HMCN1Q96RW7 5635 aa4.33□□□□□ -1.72
EWSR1-207ENST00000406548 KRTAP9-9Q9BYP9 154 aa4.3□□□□□ -1.72
EWSR1-207ENST00000406548 KRTAP5-3Q6L8H2 238 aa4.28□□□□□ -1.72
EWSR1-207ENST00000406548 KRTAP4-12Q9BQ66 201 aa4.16□□□□□ -1.74
EWSR1-207ENST00000406548 GPR98Q8WXG9 6306 aa4.12□□□□□ -1.75
EWSR1-207ENST00000406548 KRTAP4-2Q9BYR5 136 aa4.11□□□□□ -1.75
EWSR1-207ENST00000406548 MUC5ACP98088 5654 aa4.06□□□□□ -1.76
EWSR1-207ENST00000406548 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
EWSR1-207ENST00000406548 LCE1BQ5T7P3 118 aa3.85□□□□□ -1.79
EWSR1-207ENST00000406548 AHNAK2Q8IVF2 5795 aa3.84□□□□□ -1.79
EWSR1-207ENST00000406548 KRTAP5-10Q6L8G5 202 aa3.83□□□□□ -1.8
EWSR1-207ENST00000406548 KRTAP4-11Q9BYQ6 195 aa3.82□□□□□ -1.8
EWSR1-207ENST00000406548 KRTAP5-1Q6L8H4 278 aa3.79□□□□□ -1.8
EWSR1-207ENST00000406548 LCE1CQ5T751 118 aa3.7□□□□□ -1.82
EWSR1-207ENST00000406548 KRTAP5-8O75690 187 aa3.66□□□□□ -1.82
EWSR1-207ENST00000406548 KRTAP5-7Q6L8G8 165 aa3.66□□□□□ -1.82
EWSR1-207ENST00000406548 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.52□□□□□ -1.85
EWSR1-207ENST00000406548 KRTAP21-2Q3LI59 83 aa3.5□□□□□ -1.85
EWSR1-207ENST00000406548 LCE1FQ5T754 118 aa3.34□□□□□ -1.88
EWSR1-207ENST00000406548 AHNAKQ09666 5890 aaKnown RBP3.21□□□□□ -1.89
EWSR1-207ENST00000406548 KRTAP5-11Q6L8G4 156 aa3.19□□□□□ -1.9
EWSR1-207ENST00000406548 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
EWSR1-207ENST00000406548 MUC5BQ9HC84 5762 aaPredicted RBP3.16□□□□□ -1.9
EWSR1-207ENST00000406548 KRTAP21-1Q3LI58 79 aa3.14□□□□□ -1.91
EWSR1-207ENST00000406548 MUC19Q7Z5P9 8384 aa2.93□□□□□ -1.94
EWSR1-207ENST00000406548 PHGR1C9JFL3 82 aa2.74□□□□□ -1.97
EWSR1-207ENST00000406548 MUC16Q8WXI7 14507 aa1.84□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 70.9 ms