RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 LCE1DQ5T752 114 aa5.42□□□□□ -1.54
TPM1-207ENST00000403994 TNP1P09430 55 aa5.4□□□□□ -1.54
TPM1-207ENST00000403994 ATP5EP56381 51 aaPredicted RBP5.39□□□□□ -1.55
TPM1-207ENST00000403994 CCDC179H3BU77 68 aa5.37□□□□□ -1.55
TPM1-207ENST00000403994 LCE4AQ5TA78 99 aa5.36□□□□□ -1.55
TPM1-207ENST00000403994 PRR15LQ9BU68 103 aa5.35□□□□□ -1.55
TPM1-207ENST00000403994 KRTAP4-3Q9BYR4 195 aa5.35□□□□□ -1.55
TPM1-207ENST00000403994 MT4P47944 62 aa5.33□□□□□ -1.56
TPM1-207ENST00000403994 TMEM258P61165 79 aa5.28□□□□□ -1.56
TPM1-207ENST00000403994 KRTAP19-4Q3LI73 84 aa5.28□□□□□ -1.56
TPM1-207ENST00000403994 KRTAP5-4Q6L8H1 288 aa5.28□□□□□ -1.56
TPM1-207ENST00000403994 LINC01558Q9Y6Z2 57 aa5.28□□□□□ -1.56
TPM1-207ENST00000403994 AHNAK2Q8IVF2 5795 aa5.28□□□□□ -1.56
TPM1-207ENST00000403994 KRTAP12-3P60328 96 aa5.22□□□□□ -1.57
TPM1-207ENST00000403994 KRTAP4-7Q9BYR0 210 aa5.2□□□□□ -1.58
TPM1-207ENST00000403994 UQCR11O14957 56 aa5.18□□□□□ -1.58
TPM1-207ENST00000403994 KRTAP5-10Q6L8G5 202 aa5.09□□□□□ -1.59
TPM1-207ENST00000403994 KRTAP25-1Q3LHN0 102 aa5.07□□□□□ -1.6
TPM1-207ENST00000403994 MIR22HGQ0VDD5 57 aa5.05□□□□□ -1.6
TPM1-207ENST00000403994 KRTAP5-5Q701N2 237 aaPredicted RBP5.05□□□□□ -1.6
TPM1-207ENST00000403994 KRTAP20-2Q3LI61 65 aa4.99□□□□□ -1.61
TPM1-207ENST00000403994 V9GYY9 64 aa4.99□□□□□ -1.61
TPM1-207ENST00000403994 K7ERS5 55 aa4.96□□□□□ -1.62
TPM1-207ENST00000403994 SPRR5A0A1B0GTR4 108 aa4.93□□□□□ -1.62
TPM1-207ENST00000403994 Q1T7F1 81 aa4.93□□□□□ -1.62
TPM1-207ENST00000403994 KRTAP5-3Q6L8H2 238 aa4.93□□□□□ -1.62
TPM1-207ENST00000403994 PSPHP1O15172 72 aa4.91□□□□□ -1.62
TPM1-207ENST00000403994 KRTAP4-2Q9BYR5 136 aa4.91□□□□□ -1.62
TPM1-207ENST00000403994 KRTAP4-11Q9BYQ6 195 aa4.9□□□□□ -1.63
TPM1-207ENST00000403994 PCP4P48539 62 aa4.89□□□□□ -1.63
TPM1-207ENST00000403994 KRTAP12-4P60329 112 aa4.89□□□□□ -1.63
TPM1-207ENST00000403994 KRTAP5-7Q6L8G8 165 aa4.89□□□□□ -1.63
TPM1-207ENST00000403994 RPS28P62857 69 aaKnown RBP4.86□□□□□ -1.63
TPM1-207ENST00000403994 KRTAP23-1A1A580 65 aa4.85□□□□□ -1.63
TPM1-207ENST00000403994 KRTAP15-1Q3LI76 137 aa4.84□□□□□ -1.63
TPM1-207ENST00000403994 SYNE1Q8NF91 8797 aaKnown RBP4.84□□□□□ -1.64
TPM1-207ENST00000403994 LCE3CQ5T5A8 94 aa4.79□□□□□ -1.64
TPM1-207ENST00000403994 A6NED7 52 aa4.73□□□□□ -1.65
TPM1-207ENST00000403994 CDC42SE1Q9NRR8 79 aa4.71□□□□□ -1.66
TPM1-207ENST00000403994 MT1AP04731 61 aa4.65□□□□□ -1.67
TPM1-207ENST00000403994 KRTAP6-1Q3LI64 71 aa4.64□□□□□ -1.67
TPM1-207ENST00000403994 ROMO1P60602 79 aa4.62□□□□□ -1.67
TPM1-207ENST00000403994 KRTAP5-2Q701N4 177 aa4.62□□□□□ -1.67
TPM1-207ENST00000403994 KRTAP9-6A8MVA2 160 aa4.57□□□□□ -1.68
TPM1-207ENST00000403994 KRTAP6-2Q3LI66 62 aa4.45□□□□□ -1.7
TPM1-207ENST00000403994 KRTAP5-8O75690 187 aa4.42□□□□□ -1.7
TPM1-207ENST00000403994 MUC5BQ9HC84 5762 aaPredicted RBP4.37□□□□□ -1.71
TPM1-207ENST00000403994 AHNAKQ09666 5890 aaKnown RBP4.36□□□□□ -1.71
TPM1-207ENST00000403994 MUC5ACP98088 5654 aa4.35□□□□□ -1.71
TPM1-207ENST00000403994 OBSCNQ5VST9 7968 aa4.33□□□□□ -1.72
TPM1-207ENST00000403994 MT3P25713 68 aa4.23□□□□□ -1.73
TPM1-207ENST00000403994 BRK1Q8WUW1 75 aa4.21□□□□□ -1.74
TPM1-207ENST00000403994 KRTAP5-1Q6L8H4 278 aa4.15□□□□□ -1.75
TPM1-207ENST00000403994 PMAIP1Q13794 54 aa3.99□□□□□ -1.77
TPM1-207ENST00000403994 LCE1EQ5T753 118 aa3.91□□□□□ -1.78
TPM1-207ENST00000403994 PRO0628Q9UI54 55 aa3.87□□□□□ -1.79
TPM1-207ENST00000403994 SVIPQ8NHG7 77 aa3.73□□□□□ -1.81
TPM1-207ENST00000403994 PRAC1Q96KF2 57 aa3.73□□□□□ -1.81
TPM1-207ENST00000403994 LCE1BQ5T7P3 118 aa3.7□□□□□ -1.82
TPM1-207ENST00000403994 KTN1-AS1Q86SY8 53 aa3.68□□□□□ -1.82
TPM1-207ENST00000403994 LCE1CQ5T751 118 aa3.65□□□□□ -1.83
TPM1-207ENST00000403994 LCE3DQ9BYE3 92 aa3.43□□□□□ -1.86
TPM1-207ENST00000403994 A0A0A0MQY5 61 aa3.33□□□□□ -1.88
TPM1-207ENST00000403994 KRTAP5-11Q6L8G4 156 aa3.33□□□□□ -1.88
TPM1-207ENST00000403994 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.32□□□□□ -1.88
TPM1-207ENST00000403994 LUZP6Q538Z0 58 aa3.23□□□□□ -1.89
TPM1-207ENST00000403994 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
TPM1-207ENST00000403994 LCE3EQ5T5B0 92 aa3.2□□□□□ -1.9
TPM1-207ENST00000403994 KRTAP21-2Q3LI59 83 aa3.06□□□□□ -1.92
TPM1-207ENST00000403994 PHGR1C9JFL3 82 aa2.95□□□□□ -1.94
TPM1-207ENST00000403994 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
TPM1-207ENST00000403994 NDUFAF8A1L188 74 aa2.72□□□□□ -1.97
TPM1-207ENST00000403994 MUC19Q7Z5P9 8384 aa2.68□□□□□ -1.98
TPM1-207ENST00000403994 PRM1P04553 51 aa2.37□□□□□ -2.03
TPM1-207ENST00000403994 INE1O15225 51 aa2.29□□□□□ -2.04
TPM1-207ENST00000403994 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
TPM1-207ENST00000403994 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 94 ms