RNA–Protein interactions for RNA: ENST00000399756.8

TRPV1-202, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPV1, Length 4,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-202ENST00000399756 KRTAP4-3Q9BYR4 195 aa3.35□□□□□ -1.87
TRPV1-202ENST00000399756 LCE3BQ5TA77 95 aa3.35□□□□□ -1.87
TRPV1-202ENST00000399756 KRTAP19-7Q3SYF9 63 aa3.34□□□□□ -1.87
TRPV1-202ENST00000399756 LOC100996750A0A140TA64 210 aa3.34□□□□□ -1.88
TRPV1-202ENST00000399756 KRTAP9-6A8MVA2 160 aa3.3□□□□□ -1.88
TRPV1-202ENST00000399756 KRTAP12-4P60329 112 aa3.29□□□□□ -1.88
TRPV1-202ENST00000399756 KRTAP19-4Q3LI73 84 aa3.26□□□□□ -1.89
TRPV1-202ENST00000399756 SYNE2Q8WXH0 6885 aaKnown RBP3.25□□□□□ -1.89
TRPV1-202ENST00000399756 KRTAP19-3Q7Z4W3 81 aa3.25□□□□□ -1.89
TRPV1-202ENST00000399756 MUC12Q9UKN1 5478 aa3.21□□□□□ -1.9
TRPV1-202ENST00000399756 MT1MQ8N339 61 aa3.2□□□□□ -1.9
TRPV1-202ENST00000399756 KRTAP19-6Q3LI70 58 aa3.19□□□□□ -1.9
TRPV1-202ENST00000399756 SPRR2EP22531 72 aa3.17□□□□□ -1.9
TRPV1-202ENST00000399756 SPRR2BP35325 72 aa3.17□□□□□ -1.9
TRPV1-202ENST00000399756 SPRR2AP35326 72 aa3.17□□□□□ -1.9
TRPV1-202ENST00000399756 KRTAP9-2Q9BYQ4 174 aa3.13□□□□□ -1.91
TRPV1-202ENST00000399756 SSPOA2VEC9 5147 aa3.12□□□□□ -1.91
TRPV1-202ENST00000399756 KRTAP2-3P0C7H8 128 aa3.11□□□□□ -1.91
TRPV1-202ENST00000399756 KRTAP2-4Q9BYR9 128 aa3.11□□□□□ -1.91
TRPV1-202ENST00000399756 KRTAP2-1Q9BYU5 128 aa3.11□□□□□ -1.91
TRPV1-202ENST00000399756 KRTAP4-9Q9BYQ8 210 aa3.1□□□□□ -1.91
TRPV1-202ENST00000399756 LCE3DQ9BYE3 92 aa3.08□□□□□ -1.92
TRPV1-202ENST00000399756 SPRR2DP22532 72 aa3.03□□□□□ -1.92
TRPV1-202ENST00000399756 LCE3EQ5T5B0 92 aa3.01□□□□□ -1.93
TRPV1-202ENST00000399756 MACF1Q9UPN3 7388 aaKnown RBP3□□□□□ -1.93
TRPV1-202ENST00000399756 LCE5AQ5TCM9 118 aa2.91□□□□□ -1.94
TRPV1-202ENST00000399756 KRTAP6-1Q3LI64 71 aa2.91□□□□□ -1.94
TRPV1-202ENST00000399756 PRM1P04553 51 aa2.89□□□□□ -1.95
TRPV1-202ENST00000399756 KRTAP9-6A0A140TA67 174 aa2.89□□□□□ -1.95
TRPV1-202ENST00000399756 MT1AP04731 61 aa2.87□□□□□ -1.95
TRPV1-202ENST00000399756 LCE1AQ5T7P2 110 aa2.81□□□□□ -1.96
TRPV1-202ENST00000399756 MT4P47944 62 aa2.8□□□□□ -1.96
TRPV1-202ENST00000399756 MT3P25713 68 aa2.79□□□□□ -1.96
TRPV1-202ENST00000399756 MDN1Q9NU22 5596 aa2.77□□□□□ -1.97
TRPV1-202ENST00000399756 KRTAP9-7A8MTY7 169 aa2.77□□□□□ -1.97
TRPV1-202ENST00000399756 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.76□□□□□ -1.97
TRPV1-202ENST00000399756 KRTAP6-2Q3LI66 62 aa2.73□□□□□ -1.97
TRPV1-202ENST00000399756 KRTAP6-3Q3LI67 103 aa2.72□□□□□ -1.97
TRPV1-202ENST00000399756 MUC19Q7Z5P9 8384 aa2.68□□□□□ -1.98
TRPV1-202ENST00000399756 KRTAP9-4Q9BYQ2 154 aa2.66□□□□□ -1.98
TRPV1-202ENST00000399756 LCE1DQ5T752 114 aa2.64□□□□□ -1.99
TRPV1-202ENST00000399756 LCE1BQ5T7P3 118 aa2.62□□□□□ -1.99
TRPV1-202ENST00000399756 KRTAP5-9P26371 169 aa2.61□□□□□ -1.99
TRPV1-202ENST00000399756 KRTAP20-1Q3LI63 56 aa2.48□□□□□ -2.01
TRPV1-202ENST00000399756 KRTAP4-6Q9BYQ5 205 aa2.45□□□□□ -2.02
TRPV1-202ENST00000399756 KRTAP5-5Q701N2 237 aaPredicted RBP2.44□□□□□ -2.02
TRPV1-202ENST00000399756 KRTAP2-2Q9BYT5 123 aa2.42□□□□□ -2.02
TRPV1-202ENST00000399756 NEBP20929 6669 aa2.42□□□□□ -2.02
TRPV1-202ENST00000399756 LCE4AQ5TA78 99 aa2.38□□□□□ -2.03
TRPV1-202ENST00000399756 KRTAP9-9Q9BYP9 154 aa2.33□□□□□ -2.04
TRPV1-202ENST00000399756 KRTAP20-2Q3LI61 65 aa2.28□□□□□ -2.04
TRPV1-202ENST00000399756 LCE1EQ5T753 118 aa2.27□□□□□ -2.05
TRPV1-202ENST00000399756 MUC5ACP98088 5654 aa2.25□□□□□ -2.05
TRPV1-202ENST00000399756 KRTAP4-11Q9BYQ6 195 aa2.22□□□□□ -2.05
TRPV1-202ENST00000399756 LCE1FQ5T754 118 aa2.21□□□□□ -2.06
TRPV1-202ENST00000399756 GPR98Q8WXG9 6306 aa2.2□□□□□ -2.06
TRPV1-202ENST00000399756 KRTAP5-4Q6L8H1 288 aa2.13□□□□□ -2.07
TRPV1-202ENST00000399756 HMCN1Q96RW7 5635 aa2.13□□□□□ -2.07
TRPV1-202ENST00000399756 KRTAP4-4Q9BYR3 166 aa2.06□□□□□ -2.08
TRPV1-202ENST00000399756 LCE1CQ5T751 118 aa2.01□□□□□ -2.09
TRPV1-202ENST00000399756 KRTAP4-12Q9BQ66 201 aa1.97□□□□□ -2.09
TRPV1-202ENST00000399756 KRTAP4-2Q9BYR5 136 aa1.97□□□□□ -2.09
TRPV1-202ENST00000399756 KRTAP5-2Q701N4 177 aa1.91□□□□□ -2.1
TRPV1-202ENST00000399756 KRTAP5-3Q6L8H2 238 aa1.91□□□□□ -2.1
TRPV1-202ENST00000399756 KRTAP5-10Q6L8G5 202 aa1.87□□□□□ -2.11
TRPV1-202ENST00000399756 AHNAK2Q8IVF2 5795 aa1.85□□□□□ -2.11
TRPV1-202ENST00000399756 MUC5BQ9HC84 5762 aaPredicted RBP1.75□□□□□ -2.13
TRPV1-202ENST00000399756 KRTAP5-8O75690 187 aa1.73□□□□□ -2.13
TRPV1-202ENST00000399756 KRTAP5-1Q6L8H4 278 aa1.71□□□□□ -2.14
TRPV1-202ENST00000399756 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
TRPV1-202ENST00000399756 KRTAP5-7Q6L8G8 165 aa1.59□□□□□ -2.16
TRPV1-202ENST00000399756 AHNAKQ09666 5890 aaKnown RBP1.57□□□□□ -2.16
TRPV1-202ENST00000399756 KRTAP5-11Q6L8G4 156 aa1.53□□□□□ -2.17
TRPV1-202ENST00000399756 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.48□□□□□ -2.17
TRPV1-202ENST00000399756 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
TRPV1-202ENST00000399756 PHGR1C9JFL3 82 aa1.32□□□□□ -2.2
TRPV1-202ENST00000399756 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 69.8 ms