RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 MT1EP04732 61 aa5.44□□□□□ -1.54
COL25A1-201ENST00000399126 MT1LQ93083 61 aa5.36□□□□□ -1.55
COL25A1-201ENST00000399126 KRTAP4-7Q9BYR0 210 aa5.34□□□□□ -1.55
COL25A1-201ENST00000399126 LCE3CQ5T5A8 94 aa5.34□□□□□ -1.55
COL25A1-201ENST00000399126 SPRR2FQ96RM1 72 aa5.28□□□□□ -1.56
COL25A1-201ENST00000399126 LCE1FQ5T754 118 aa5.27□□□□□ -1.57
COL25A1-201ENST00000399126 MDN1Q9NU22 5596 aa5.27□□□□□ -1.57
COL25A1-201ENST00000399126 LCE1AQ5T7P2 110 aa5.2□□□□□ -1.58
COL25A1-201ENST00000399126 KRTAP19-3Q7Z4W3 81 aa5.19□□□□□ -1.58
COL25A1-201ENST00000399126 KRTAP9-6A8MVA2 160 aa5.17□□□□□ -1.58
COL25A1-201ENST00000399126 DSTQ03001 7570 aaKnown RBP5.17□□□□□ -1.58
COL25A1-201ENST00000399126 LCE1EQ5T753 118 aa5.16□□□□□ -1.58
COL25A1-201ENST00000399126 KRTAP4-3Q9BYR4 195 aa5.16□□□□□ -1.58
COL25A1-201ENST00000399126 KRTAP9-6A0A140TA67 174 aa5.15□□□□□ -1.59
COL25A1-201ENST00000399126 MT1MQ8N339 61 aa5.12□□□□□ -1.59
COL25A1-201ENST00000399126 KRTAP9-4Q9BYQ2 154 aa5.11□□□□□ -1.59
COL25A1-201ENST00000399126 MT1GP13640 62 aa5.1□□□□□ -1.59
COL25A1-201ENST00000399126 KRTAP5-9P26371 169 aa5.1□□□□□ -1.59
COL25A1-201ENST00000399126 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.08□□□□□ -1.6
COL25A1-201ENST00000399126 KRTAP19-4Q3LI73 84 aa5.08□□□□□ -1.6
COL25A1-201ENST00000399126 KRTAP6-3Q3LI67 103 aa5.05□□□□□ -1.6
COL25A1-201ENST00000399126 LOC100996750A0A140TA64 210 aa5.01□□□□□ -1.61
COL25A1-201ENST00000399126 SPRR2EP22531 72 aa4.95□□□□□ -1.62
COL25A1-201ENST00000399126 SPRR2BP35325 72 aa4.95□□□□□ -1.62
COL25A1-201ENST00000399126 SPRR2AP35326 72 aa4.95□□□□□ -1.62
COL25A1-201ENST00000399126 LCE1DQ5T752 114 aa4.93□□□□□ -1.62
COL25A1-201ENST00000399126 KRTAP2-3P0C7H8 128 aa4.93□□□□□ -1.62
COL25A1-201ENST00000399126 KRTAP2-4Q9BYR9 128 aa4.93□□□□□ -1.62
COL25A1-201ENST00000399126 KRTAP2-1Q9BYU5 128 aa4.93□□□□□ -1.62
COL25A1-201ENST00000399126 KRTAP9-9Q9BYP9 154 aa4.83□□□□□ -1.64
COL25A1-201ENST00000399126 NEBP20929 6669 aa4.76□□□□□ -1.65
COL25A1-201ENST00000399126 KRTAP9-7A8MTY7 169 aa4.75□□□□□ -1.65
COL25A1-201ENST00000399126 SPRR2DP22532 72 aa4.75□□□□□ -1.65
COL25A1-201ENST00000399126 KRTAP12-4P60329 112 aa4.74□□□□□ -1.65
COL25A1-201ENST00000399126 LCE3EQ5T5B0 92 aa4.6□□□□□ -1.67
COL25A1-201ENST00000399126 KRTAP5-5Q701N2 237 aaPredicted RBP4.59□□□□□ -1.67
COL25A1-201ENST00000399126 LCE4AQ5TA78 99 aa4.56□□□□□ -1.68
COL25A1-201ENST00000399126 SYNE1Q8NF91 8797 aaKnown RBP4.56□□□□□ -1.68
COL25A1-201ENST00000399126 KRTAP6-1Q3LI64 71 aa4.56□□□□□ -1.68
COL25A1-201ENST00000399126 LCE3BQ5TA77 95 aa4.55□□□□□ -1.68
COL25A1-201ENST00000399126 MT1AP04731 61 aa4.5□□□□□ -1.69
COL25A1-201ENST00000399126 LCE3DQ9BYE3 92 aa4.36□□□□□ -1.71
COL25A1-201ENST00000399126 MT3P25713 68 aa4.36□□□□□ -1.71
COL25A1-201ENST00000399126 KRTAP4-9Q9BYQ8 210 aa4.32□□□□□ -1.72
COL25A1-201ENST00000399126 KRTAP5-4Q6L8H1 288 aa4.29□□□□□ -1.72
COL25A1-201ENST00000399126 MT4P47944 62 aa4.2□□□□□ -1.74
COL25A1-201ENST00000399126 KRTAP4-6Q9BYQ5 205 aa4.19□□□□□ -1.74
COL25A1-201ENST00000399126 OBSCNQ5VST9 7968 aa4.18□□□□□ -1.74
COL25A1-201ENST00000399126 KRTAP20-1Q3LI63 56 aa4.18□□□□□ -1.74
COL25A1-201ENST00000399126 HMCN1Q96RW7 5635 aa4.18□□□□□ -1.74
COL25A1-201ENST00000399126 KRTAP6-2Q3LI66 62 aa4.17□□□□□ -1.74
COL25A1-201ENST00000399126 PRM1P04553 51 aa4.15□□□□□ -1.74
COL25A1-201ENST00000399126 KRTAP20-2Q3LI61 65 aa4.05□□□□□ -1.76
COL25A1-201ENST00000399126 KRTAP5-2Q701N4 177 aa3.91□□□□□ -1.78
COL25A1-201ENST00000399126 KRTAP5-3Q6L8H2 238 aa3.88□□□□□ -1.79
COL25A1-201ENST00000399126 AHNAK2Q8IVF2 5795 aa3.59□□□□□ -1.83
COL25A1-201ENST00000399126 MUC19Q7Z5P9 8384 aa3.56□□□□□ -1.84
COL25A1-201ENST00000399126 KRTAP4-11Q9BYQ6 195 aa3.47□□□□□ -1.85
COL25A1-201ENST00000399126 MUC5ACP98088 5654 aa3.47□□□□□ -1.85
COL25A1-201ENST00000399126 KRTAP5-1Q6L8H4 278 aa3.41□□□□□ -1.86
COL25A1-201ENST00000399126 LCE1BQ5T7P3 118 aa3.38□□□□□ -1.87
COL25A1-201ENST00000399126 KRTAP5-8O75690 187 aa3.35□□□□□ -1.87
COL25A1-201ENST00000399126 LCE1CQ5T751 118 aa3.34□□□□□ -1.87
COL25A1-201ENST00000399126 KRTAP5-10Q6L8G5 202 aa3.31□□□□□ -1.88
COL25A1-201ENST00000399126 KRTAP4-2Q9BYR5 136 aa3.31□□□□□ -1.88
COL25A1-201ENST00000399126 GPR98Q8WXG9 6306 aa3.21□□□□□ -1.9
COL25A1-201ENST00000399126 KRTAP5-7Q6L8G8 165 aa3.18□□□□□ -1.9
COL25A1-201ENST00000399126 MUC5BQ9HC84 5762 aaPredicted RBP3.08□□□□□ -1.92
COL25A1-201ENST00000399126 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
COL25A1-201ENST00000399126 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.03□□□□□ -1.92
COL25A1-201ENST00000399126 KRTAP21-2Q3LI59 83 aa2.96□□□□□ -1.94
COL25A1-201ENST00000399126 KRTAP5-11Q6L8G4 156 aa2.85□□□□□ -1.95
COL25A1-201ENST00000399126 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
COL25A1-201ENST00000399126 KRTAP21-1Q3LI58 79 aa2.73□□□□□ -1.97
COL25A1-201ENST00000399126 AHNAKQ09666 5890 aaKnown RBP2.63□□□□□ -1.99
COL25A1-201ENST00000399126 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
COL25A1-201ENST00000399126 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 134.1 ms