RNA–Protein interactions for RNA: ENST00000398844.6

SEC24A-202, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SEC24A, Length 6,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-202ENST00000398844 FSIP2Q5CZC0 6907 aa3□□□□□ -1.93
SEC24A-202ENST00000398844 KRTAP19-3Q7Z4W3 81 aa2.95□□□□□ -1.94
SEC24A-202ENST00000398844 KRTAP19-7Q3SYF9 63 aa2.94□□□□□ -1.94
SEC24A-202ENST00000398844 KRTAP9-6A0A140TA67 174 aa2.92□□□□□ -1.94
SEC24A-202ENST00000398844 KRTAP9-2Q9BYQ4 174 aa2.92□□□□□ -1.94
SEC24A-202ENST00000398844 KRTAP12-4P60329 112 aa2.92□□□□□ -1.94
SEC24A-202ENST00000398844 KRTAP19-6Q3LI70 58 aa2.92□□□□□ -1.94
SEC24A-202ENST00000398844 MT1MQ8N339 61 aa2.9□□□□□ -1.94
SEC24A-202ENST00000398844 KRTAP9-6A8MVA2 160 aa2.87□□□□□ -1.95
SEC24A-202ENST00000398844 USH2AO75445 5202 aa2.86□□□□□ -1.95
SEC24A-202ENST00000398844 SYNE2Q8WXH0 6885 aaKnown RBP2.86□□□□□ -1.95
SEC24A-202ENST00000398844 KRTAP4-9Q9BYQ8 210 aa2.84□□□□□ -1.96
SEC24A-202ENST00000398844 KRTAP19-4Q3LI73 84 aa2.81□□□□□ -1.96
SEC24A-202ENST00000398844 LCE2DQ5TA82 110 aaPredicted RBP2.76□□□□□ -1.97
SEC24A-202ENST00000398844 LCE3DQ9BYE3 92 aa2.76□□□□□ -1.97
SEC24A-202ENST00000398844 KRTAP20-1Q3LI63 56 aa2.76□□□□□ -1.97
SEC24A-202ENST00000398844 MT4P47944 62 aa2.73□□□□□ -1.97
SEC24A-202ENST00000398844 KRTAP2-3P0C7H8 128 aa2.72□□□□□ -1.97
SEC24A-202ENST00000398844 KRTAP2-4Q9BYR9 128 aa2.72□□□□□ -1.97
SEC24A-202ENST00000398844 KRTAP2-1Q9BYU5 128 aa2.72□□□□□ -1.97
SEC24A-202ENST00000398844 KRTAP9-7A8MTY7 169 aa2.69□□□□□ -1.98
SEC24A-202ENST00000398844 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
SEC24A-202ENST00000398844 KRTAP6-1Q3LI64 71 aa2.65□□□□□ -1.98
SEC24A-202ENST00000398844 PRM1P04553 51 aa2.65□□□□□ -1.99
SEC24A-202ENST00000398844 SSPOA2VEC9 5147 aa2.61□□□□□ -1.99
SEC24A-202ENST00000398844 LCE5AQ5TCM9 118 aa2.6□□□□□ -1.99
SEC24A-202ENST00000398844 MACF1Q9UPN3 7388 aaKnown RBP2.59□□□□□ -2
SEC24A-202ENST00000398844 MT1AP04731 61 aa2.57□□□□□ -2
SEC24A-202ENST00000398844 LCE1AQ5T7P2 110 aa2.55□□□□□ -2
SEC24A-202ENST00000398844 MT3P25713 68 aa2.52□□□□□ -2.01
SEC24A-202ENST00000398844 KRTAP6-2Q3LI66 62 aa2.52□□□□□ -2.01
SEC24A-202ENST00000398844 FCGBPQ9Y6R7 5405 aaPredicted RBP2.5□□□□□ -2.01
SEC24A-202ENST00000398844 OBSCNQ5VST9 7968 aa2.49□□□□□ -2.01
SEC24A-202ENST00000398844 MUC12Q9UKN1 5478 aa2.49□□□□□ -2.01
SEC24A-202ENST00000398844 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.48□□□□□ -2.01
SEC24A-202ENST00000398844 KRTAP9-4Q9BYQ2 154 aa2.47□□□□□ -2.01
SEC24A-202ENST00000398844 LCE1DQ5T752 114 aa2.46□□□□□ -2.01
SEC24A-202ENST00000398844 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
SEC24A-202ENST00000398844 DSTQ03001 7570 aaKnown RBP2.42□□□□□ -2.02
SEC24A-202ENST00000398844 KRTAP6-3Q3LI67 103 aa2.4□□□□□ -2.02
SEC24A-202ENST00000398844 SYNE1Q8NF91 8797 aaKnown RBP2.38□□□□□ -2.03
SEC24A-202ENST00000398844 KRTAP2-2Q9BYT5 123 aa2.33□□□□□ -2.04
SEC24A-202ENST00000398844 KRTAP5-9P26371 169 aa2.28□□□□□ -2.04
SEC24A-202ENST00000398844 KRTAP4-6Q9BYQ5 205 aa2.27□□□□□ -2.05
SEC24A-202ENST00000398844 LCE1CQ5T751 118 aa2.27□□□□□ -2.05
SEC24A-202ENST00000398844 LCE1EQ5T753 118 aa2.27□□□□□ -2.05
SEC24A-202ENST00000398844 LCE1FQ5T754 118 aa2.27□□□□□ -2.05
SEC24A-202ENST00000398844 LCE4AQ5TA78 99 aa2.2□□□□□ -2.06
SEC24A-202ENST00000398844 NEBP20929 6669 aa2.18□□□□□ -2.06
SEC24A-202ENST00000398844 KRTAP5-5Q701N2 237 aaPredicted RBP2.16□□□□□ -2.06
SEC24A-202ENST00000398844 KRTAP9-9Q9BYP9 154 aa2.16□□□□□ -2.06
SEC24A-202ENST00000398844 MDN1Q9NU22 5596 aa2.13□□□□□ -2.07
SEC24A-202ENST00000398844 KRTAP20-2Q3LI61 65 aa2.1□□□□□ -2.07
SEC24A-202ENST00000398844 KRTAP4-11Q9BYQ6 195 aa2.04□□□□□ -2.08
SEC24A-202ENST00000398844 KRTAP5-4Q6L8H1 288 aa1.98□□□□□ -2.09
SEC24A-202ENST00000398844 KRTAP4-4Q9BYR3 166 aa1.95□□□□□ -2.1
SEC24A-202ENST00000398844 KRTAP4-12Q9BQ66 201 aa1.88□□□□□ -2.11
SEC24A-202ENST00000398844 KRTAP4-2Q9BYR5 136 aa1.88□□□□□ -2.11
SEC24A-202ENST00000398844 MUC19Q7Z5P9 8384 aa1.83□□□□□ -2.12
SEC24A-202ENST00000398844 KRTAP5-3Q6L8H2 238 aa1.71□□□□□ -2.14
SEC24A-202ENST00000398844 KRTAP5-2Q701N4 177 aa1.69□□□□□ -2.14
SEC24A-202ENST00000398844 HMCN1Q96RW7 5635 aa1.66□□□□□ -2.14
SEC24A-202ENST00000398844 MUC5ACP98088 5654 aa1.62□□□□□ -2.15
SEC24A-202ENST00000398844 KRTAP5-10Q6L8G5 202 aa1.62□□□□□ -2.15
SEC24A-202ENST00000398844 KRTAP5-8O75690 187 aa1.6□□□□□ -2.15
SEC24A-202ENST00000398844 PHGR1C9JFL3 82 aa1.54□□□□□ -2.16
SEC24A-202ENST00000398844 GPR98Q8WXG9 6306 aa1.53□□□□□ -2.17
SEC24A-202ENST00000398844 KRTAP5-1Q6L8H4 278 aa1.52□□□□□ -2.17
SEC24A-202ENST00000398844 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.49□□□□□ -2.17
SEC24A-202ENST00000398844 KRTAP21-2Q3LI59 83 aa1.46□□□□□ -2.17
SEC24A-202ENST00000398844 AHNAK2Q8IVF2 5795 aa1.38□□□□□ -2.19
SEC24A-202ENST00000398844 MUC5BQ9HC84 5762 aaPredicted RBP1.38□□□□□ -2.19
SEC24A-202ENST00000398844 KRTAP5-11Q6L8G4 156 aa1.33□□□□□ -2.2
SEC24A-202ENST00000398844 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
SEC24A-202ENST00000398844 KRTAP5-7Q6L8G8 165 aa1.23□□□□□ -2.21
SEC24A-202ENST00000398844 AHNAKQ09666 5890 aaKnown RBP1.17□□□□□ -2.22
SEC24A-202ENST00000398844 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 105.3 ms