RNA–Protein interactions for RNA: ENST00000398339.5

TCF4-203, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-203ENST00000398339 KRTAP9-6A8MVA2 160 aa2.96□□□□□ -1.94
TCF4-203ENST00000398339 USH2AO75445 5202 aa2.91□□□□□ -1.94
TCF4-203ENST00000398339 KRTAP2-3P0C7H8 128 aa2.91□□□□□ -1.94
TCF4-203ENST00000398339 KRTAP2-4Q9BYR9 128 aa2.91□□□□□ -1.94
TCF4-203ENST00000398339 KRTAP2-1Q9BYU5 128 aa2.91□□□□□ -1.94
TCF4-203ENST00000398339 SSPOA2VEC9 5147 aa2.91□□□□□ -1.94
TCF4-203ENST00000398339 KRTAP4-8A0A0G2JLE6 195 aa2.91□□□□□ -1.94
TCF4-203ENST00000398339 KRTAP2-2Q9BYT5 123 aa2.9□□□□□ -1.94
TCF4-203ENST00000398339 FCGBPQ9Y6R7 5405 aaPredicted RBP2.89□□□□□ -1.95
TCF4-203ENST00000398339 KMT2DO14686 5537 aa2.88□□□□□ -1.95
TCF4-203ENST00000398339 KRTAP19-7Q3SYF9 63 aa2.87□□□□□ -1.95
TCF4-203ENST00000398339 KRTAP4-7Q9BYR0 210 aa2.86□□□□□ -1.95
TCF4-203ENST00000398339 MACF1Q9UPN3 7388 aaKnown RBP2.85□□□□□ -1.95
TCF4-203ENST00000398339 KRTAP19-4Q3LI73 84 aa2.84□□□□□ -1.96
TCF4-203ENST00000398339 KRTAP20-1Q3LI63 56 aa2.83□□□□□ -1.96
TCF4-203ENST00000398339 SYNE2Q8WXH0 6885 aaKnown RBP2.83□□□□□ -1.96
TCF4-203ENST00000398339 MT1LQ93083 61 aa2.8□□□□□ -1.96
TCF4-203ENST00000398339 LCE1DQ5T752 114 aa2.78□□□□□ -1.96
TCF4-203ENST00000398339 MT1EP04732 61 aa2.77□□□□□ -1.97
TCF4-203ENST00000398339 LCE5AQ5TCM9 118 aa2.77□□□□□ -1.97
TCF4-203ENST00000398339 KRTAP6-3Q3LI67 103 aa2.73□□□□□ -1.97
TCF4-203ENST00000398339 LCE1AQ5T7P2 110 aa2.73□□□□□ -1.97
TCF4-203ENST00000398339 KRTAP19-6Q3LI70 58 aa2.72□□□□□ -1.97
TCF4-203ENST00000398339 MUC5BQ9HC84 5762 aaPredicted RBP2.68□□□□□ -1.98
TCF4-203ENST00000398339 NEBP20929 6669 aa2.66□□□□□ -1.98
TCF4-203ENST00000398339 MUC12Q9UKN1 5478 aa2.66□□□□□ -1.98
TCF4-203ENST00000398339 KRTAP4-9Q9BYQ8 210 aa2.65□□□□□ -1.98
TCF4-203ENST00000398339 KRTAP4-11Q9BYQ6 195 aa2.65□□□□□ -1.99
TCF4-203ENST00000398339 LCE1EQ5T753 118 aa2.63□□□□□ -1.99
TCF4-203ENST00000398339 KRTAP4-3Q9BYR4 195 aa2.63□□□□□ -1.99
TCF4-203ENST00000398339 KRTAP4-2Q9BYR5 136 aa2.63□□□□□ -1.99
TCF4-203ENST00000398339 MT1GP13640 62 aa2.62□□□□□ -1.99
TCF4-203ENST00000398339 KRTAP12-4P60329 112 aa2.6□□□□□ -1.99
TCF4-203ENST00000398339 MT1MQ8N339 61 aa2.58□□□□□ -2
TCF4-203ENST00000398339 MDN1Q9NU22 5596 aa2.57□□□□□ -2
TCF4-203ENST00000398339 KRTAP19-3Q7Z4W3 81 aa2.55□□□□□ -2
TCF4-203ENST00000398339 AHNAKQ09666 5890 aaKnown RBP2.54□□□□□ -2
TCF4-203ENST00000398339 KRTAP5-9P26371 169 aa2.52□□□□□ -2.01
TCF4-203ENST00000398339 KRTAP5-7Q6L8G8 165 aa2.49□□□□□ -2.01
TCF4-203ENST00000398339 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
TCF4-203ENST00000398339 MT1AP04731 61 aa2.43□□□□□ -2.02
TCF4-203ENST00000398339 PRM1P04553 51 aa2.4□□□□□ -2.03
TCF4-203ENST00000398339 SPRR2EP22531 72 aa2.38□□□□□ -2.03
TCF4-203ENST00000398339 SPRR2BP35325 72 aa2.38□□□□□ -2.03
TCF4-203ENST00000398339 SPRR2AP35326 72 aa2.38□□□□□ -2.03
TCF4-203ENST00000398339 KRTAP6-1Q3LI64 71 aa2.38□□□□□ -2.03
TCF4-203ENST00000398339 SPRR2FQ96RM1 72 aa2.38□□□□□ -2.03
TCF4-203ENST00000398339 LCE3DQ9BYE3 92 aa2.37□□□□□ -2.03
TCF4-203ENST00000398339 SYNE1Q8NF91 8797 aaKnown RBP2.36□□□□□ -2.03
TCF4-203ENST00000398339 LCE3EQ5T5B0 92 aa2.36□□□□□ -2.03
TCF4-203ENST00000398339 DSTQ03001 7570 aaKnown RBP2.35□□□□□ -2.03
TCF4-203ENST00000398339 KRTAP5-5Q701N2 237 aaPredicted RBP2.35□□□□□ -2.03
TCF4-203ENST00000398339 SPRR2DP22532 72 aa2.3□□□□□ -2.04
TCF4-203ENST00000398339 AHNAK2Q8IVF2 5795 aa2.25□□□□□ -2.05
TCF4-203ENST00000398339 KRTAP5-10Q6L8G5 202 aa2.24□□□□□ -2.05
TCF4-203ENST00000398339 KRTAP6-2Q3LI66 62 aa2.21□□□□□ -2.06
TCF4-203ENST00000398339 KRTAP5-3Q6L8H2 238 aa2.19□□□□□ -2.06
TCF4-203ENST00000398339 HMCN1Q96RW7 5635 aa2.14□□□□□ -2.07
TCF4-203ENST00000398339 MT3P25713 68 aa2.09□□□□□ -2.07
TCF4-203ENST00000398339 OBSCNQ5VST9 7968 aa2.06□□□□□ -2.08
TCF4-203ENST00000398339 MT4P47944 62 aa2.02□□□□□ -2.09
TCF4-203ENST00000398339 MUC5ACP98088 5654 aa2.02□□□□□ -2.09
TCF4-203ENST00000398339 KRTAP5-4Q6L8H1 288 aa1.98□□□□□ -2.09
TCF4-203ENST00000398339 KRTAP5-11Q6L8G4 156 aa1.89□□□□□ -2.11
TCF4-203ENST00000398339 KRTAP20-2Q3LI61 65 aa1.87□□□□□ -2.11
TCF4-203ENST00000398339 KRTAP5-2Q701N4 177 aa1.82□□□□□ -2.12
TCF4-203ENST00000398339 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
TCF4-203ENST00000398339 LCE1CQ5T751 118 aa1.74□□□□□ -2.13
TCF4-203ENST00000398339 LCE1BQ5T7P3 118 aa1.74□□□□□ -2.13
TCF4-203ENST00000398339 KRTAP5-8O75690 187 aa1.7□□□□□ -2.14
TCF4-203ENST00000398339 KRTAP5-1Q6L8H4 278 aa1.67□□□□□ -2.14
TCF4-203ENST00000398339 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
TCF4-203ENST00000398339 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.54□□□□□ -2.16
TCF4-203ENST00000398339 KRTAP21-2Q3LI59 83 aa1.53□□□□□ -2.16
TCF4-203ENST00000398339 KRTAP4-4Q9BYR3 166 aa1.51□□□□□ -2.17
TCF4-203ENST00000398339 PHGR1C9JFL3 82 aa1.31□□□□□ -2.2
TCF4-203ENST00000398339 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 68.7 ms