RNA–Protein interactions for RNA: ENST00000397113.6

FGFR1-209, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene FGFR1, Length 3,680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-209ENST00000397113 LOC100996750A0A140TA64 210 aa3.49□□□□□ -1.85
FGFR1-209ENST00000397113 MUC12Q9UKN1 5478 aa3.47□□□□□ -1.85
FGFR1-209ENST00000397113 KRTAP4-3Q9BYR4 195 aa3.46□□□□□ -1.86
FGFR1-209ENST00000397113 KRTAP19-7Q3SYF9 63 aa3.44□□□□□ -1.86
FGFR1-209ENST00000397113 KRTAP2-2Q9BYT5 123 aa3.44□□□□□ -1.86
FGFR1-209ENST00000397113 MT1GP13640 62 aa3.43□□□□□ -1.86
FGFR1-209ENST00000397113 KRTAP12-4P60329 112 aa3.41□□□□□ -1.86
FGFR1-209ENST00000397113 KRTAP2-3P0C7H8 128 aa3.4□□□□□ -1.87
FGFR1-209ENST00000397113 KRTAP2-4Q9BYR9 128 aa3.4□□□□□ -1.87
FGFR1-209ENST00000397113 KRTAP2-1Q9BYU5 128 aa3.4□□□□□ -1.87
FGFR1-209ENST00000397113 MT1LQ93083 61 aa3.39□□□□□ -1.87
FGFR1-209ENST00000397113 MT1EP04732 61 aa3.34□□□□□ -1.88
FGFR1-209ENST00000397113 KRTAP5-9P26371 169 aa3.32□□□□□ -1.88
FGFR1-209ENST00000397113 LCE3BQ5TA77 95 aa3.32□□□□□ -1.88
FGFR1-209ENST00000397113 SYNE2Q8WXH0 6885 aaKnown RBP3.31□□□□□ -1.88
FGFR1-209ENST00000397113 KRTAP4-9Q9BYQ8 210 aa3.3□□□□□ -1.88
FGFR1-209ENST00000397113 SPRR2FQ96RM1 72 aa3.16□□□□□ -1.9
FGFR1-209ENST00000397113 MACF1Q9UPN3 7388 aaKnown RBP3.15□□□□□ -1.91
FGFR1-209ENST00000397113 KRTAP9-2Q9BYQ4 174 aa3.14□□□□□ -1.91
FGFR1-209ENST00000397113 LCE1AQ5T7P2 110 aa3.14□□□□□ -1.91
FGFR1-209ENST00000397113 KRTAP6-3Q3LI67 103 aa3.14□□□□□ -1.91
FGFR1-209ENST00000397113 MT1MQ8N339 61 aa3.14□□□□□ -1.91
FGFR1-209ENST00000397113 LCE5AQ5TCM9 118 aa3.13□□□□□ -1.91
FGFR1-209ENST00000397113 KRTAP19-3Q7Z4W3 81 aa3.1□□□□□ -1.91
FGFR1-209ENST00000397113 KRTAP9-7A8MTY7 169 aa3.06□□□□□ -1.92
FGFR1-209ENST00000397113 PRM1P04553 51 aa3.05□□□□□ -1.92
FGFR1-209ENST00000397113 KRTAP9-6A0A140TA67 174 aa3.05□□□□□ -1.92
FGFR1-209ENST00000397113 KRTAP5-5Q701N2 237 aaPredicted RBP3.05□□□□□ -1.92
FGFR1-209ENST00000397113 LCE1EQ5T753 118 aa3.04□□□□□ -1.92
FGFR1-209ENST00000397113 LCE3DQ9BYE3 92 aa3.04□□□□□ -1.92
FGFR1-209ENST00000397113 MDN1Q9NU22 5596 aa3.03□□□□□ -1.92
FGFR1-209ENST00000397113 LCE1FQ5T754 118 aa3□□□□□ -1.93
FGFR1-209ENST00000397113 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
FGFR1-209ENST00000397113 KRTAP6-1Q3LI64 71 aa2.97□□□□□ -1.93
FGFR1-209ENST00000397113 LCE1DQ5T752 114 aa2.94□□□□□ -1.94
FGFR1-209ENST00000397113 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.91□□□□□ -1.94
FGFR1-209ENST00000397113 KRTAP5-4Q6L8H1 288 aa2.9□□□□□ -1.95
FGFR1-209ENST00000397113 KRTAP4-6Q9BYQ5 205 aa2.88□□□□□ -1.95
FGFR1-209ENST00000397113 SPRR2EP22531 72 aa2.85□□□□□ -1.95
FGFR1-209ENST00000397113 SPRR2BP35325 72 aa2.85□□□□□ -1.95
FGFR1-209ENST00000397113 SPRR2AP35326 72 aa2.85□□□□□ -1.95
FGFR1-209ENST00000397113 KRTAP6-2Q3LI66 62 aa2.82□□□□□ -1.96
FGFR1-209ENST00000397113 MT1AP04731 61 aa2.77□□□□□ -1.97
FGFR1-209ENST00000397113 KRTAP9-4Q9BYQ2 154 aa2.75□□□□□ -1.97
FGFR1-209ENST00000397113 SPRR2DP22532 72 aa2.71□□□□□ -1.98
FGFR1-209ENST00000397113 NEBP20929 6669 aa2.71□□□□□ -1.98
FGFR1-209ENST00000397113 KRTAP5-2Q701N4 177 aa2.69□□□□□ -1.98
FGFR1-209ENST00000397113 MUC19Q7Z5P9 8384 aa2.61□□□□□ -1.99
FGFR1-209ENST00000397113 KRTAP9-9Q9BYP9 154 aa2.61□□□□□ -1.99
FGFR1-209ENST00000397113 LCE4AQ5TA78 99 aa2.6□□□□□ -1.99
FGFR1-209ENST00000397113 MT3P25713 68 aa2.58□□□□□ -2
FGFR1-209ENST00000397113 MT4P47944 62 aa2.56□□□□□ -2
FGFR1-209ENST00000397113 KRTAP5-3Q6L8H2 238 aa2.54□□□□□ -2
FGFR1-209ENST00000397113 KRTAP20-1Q3LI63 56 aa2.48□□□□□ -2.01
FGFR1-209ENST00000397113 KRTAP4-12Q9BQ66 201 aa2.42□□□□□ -2.02
FGFR1-209ENST00000397113 KRTAP20-2Q3LI61 65 aa2.41□□□□□ -2.02
FGFR1-209ENST00000397113 KRTAP5-7Q6L8G8 165 aa2.4□□□□□ -2.03
FGFR1-209ENST00000397113 GPR98Q8WXG9 6306 aa2.39□□□□□ -2.03
FGFR1-209ENST00000397113 LCE1BQ5T7P3 118 aa2.38□□□□□ -2.03
FGFR1-209ENST00000397113 KRTAP4-11Q9BYQ6 195 aa2.36□□□□□ -2.03
FGFR1-209ENST00000397113 KRTAP5-10Q6L8G5 202 aa2.32□□□□□ -2.04
FGFR1-209ENST00000397113 HMCN1Q96RW7 5635 aa2.32□□□□□ -2.04
FGFR1-209ENST00000397113 KRTAP5-8O75690 187 aa2.29□□□□□ -2.04
FGFR1-209ENST00000397113 MUC5ACP98088 5654 aa2.26□□□□□ -2.05
FGFR1-209ENST00000397113 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.24□□□□□ -2.05
FGFR1-209ENST00000397113 MUC5BQ9HC84 5762 aaPredicted RBP2.23□□□□□ -2.05
FGFR1-209ENST00000397113 KRTAP5-1Q6L8H4 278 aa2.17□□□□□ -2.06
FGFR1-209ENST00000397113 LCE1CQ5T751 118 aa2.15□□□□□ -2.07
FGFR1-209ENST00000397113 KRTAP4-2Q9BYR5 136 aa2.15□□□□□ -2.07
FGFR1-209ENST00000397113 AHNAKQ09666 5890 aaKnown RBP2.08□□□□□ -2.08
FGFR1-209ENST00000397113 AHNAK2Q8IVF2 5795 aa2.06□□□□□ -2.08
FGFR1-209ENST00000397113 KRTAP4-4Q9BYR3 166 aa2.05□□□□□ -2.08
FGFR1-209ENST00000397113 KRTAP5-11Q6L8G4 156 aa1.92□□□□□ -2.1
FGFR1-209ENST00000397113 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
FGFR1-209ENST00000397113 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.13
FGFR1-209ENST00000397113 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
FGFR1-209ENST00000397113 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 11.9 ms