RNA–Protein interactions for RNA: ENST00000397108.8

FGFR1-208, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FGFR1, Length 2,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-208ENST00000397108 NEBP20929 6669 aa4.25□□□□□ -1.73
FGFR1-208ENST00000397108 MUC12Q9UKN1 5478 aa4.25□□□□□ -1.73
FGFR1-208ENST00000397108 KRTAP4-8A0A0G2JLE6 195 aa4.25□□□□□ -1.73
FGFR1-208ENST00000397108 KRTAP9-6A8MVA2 160 aa4.25□□□□□ -1.73
FGFR1-208ENST00000397108 KRTAP4-8Q9BYQ9 185 aa4.25□□□□□ -1.73
FGFR1-208ENST00000397108 SPRR2FQ96RM1 72 aa4.23□□□□□ -1.73
FGFR1-208ENST00000397108 MDN1Q9NU22 5596 aa4.18□□□□□ -1.74
FGFR1-208ENST00000397108 KRTAP4-7Q9BYR0 210 aa4.15□□□□□ -1.75
FGFR1-208ENST00000397108 SPRR2EP22531 72 aa4.13□□□□□ -1.75
FGFR1-208ENST00000397108 SPRR2BP35325 72 aa4.13□□□□□ -1.75
FGFR1-208ENST00000397108 SPRR2AP35326 72 aa4.13□□□□□ -1.75
FGFR1-208ENST00000397108 KRTAP2-3P0C7H8 128 aa4.11□□□□□ -1.75
FGFR1-208ENST00000397108 LCE1AQ5T7P2 110 aa4.11□□□□□ -1.75
FGFR1-208ENST00000397108 KRTAP2-4Q9BYR9 128 aa4.11□□□□□ -1.75
FGFR1-208ENST00000397108 KRTAP2-1Q9BYU5 128 aa4.11□□□□□ -1.75
FGFR1-208ENST00000397108 KRTAP20-1Q3LI63 56 aa4.06□□□□□ -1.76
FGFR1-208ENST00000397108 KRTAP19-7Q3SYF9 63 aa4.04□□□□□ -1.76
FGFR1-208ENST00000397108 DSTQ03001 7570 aaKnown RBP4.01□□□□□ -1.77
FGFR1-208ENST00000397108 SPRR2DP22532 72 aa4□□□□□ -1.77
FGFR1-208ENST00000397108 MT1EP04732 61 aa3.99□□□□□ -1.77
FGFR1-208ENST00000397108 KRTAP19-3Q7Z4W3 81 aa3.92□□□□□ -1.78
FGFR1-208ENST00000397108 LCE5AQ5TCM9 118 aa3.92□□□□□ -1.78
FGFR1-208ENST00000397108 KRTAP2-2Q9BYT5 123 aa3.88□□□□□ -1.79
FGFR1-208ENST00000397108 LCE3BQ5TA77 95 aa3.88□□□□□ -1.79
FGFR1-208ENST00000397108 KRTAP12-4P60329 112 aa3.86□□□□□ -1.79
FGFR1-208ENST00000397108 MT1GP13640 62 aa3.85□□□□□ -1.79
FGFR1-208ENST00000397108 MT1LQ93083 61 aa3.84□□□□□ -1.79
FGFR1-208ENST00000397108 LOC100996750A0A140TA64 210 aa3.84□□□□□ -1.79
FGFR1-208ENST00000397108 OBSCNQ5VST9 7968 aa3.81□□□□□ -1.8
FGFR1-208ENST00000397108 MT1MQ8N339 61 aa3.79□□□□□ -1.8
FGFR1-208ENST00000397108 SYNE1Q8NF91 8797 aaKnown RBP3.79□□□□□ -1.8
FGFR1-208ENST00000397108 KRTAP4-3Q9BYR4 195 aa3.77□□□□□ -1.81
FGFR1-208ENST00000397108 KRTAP19-4Q3LI73 84 aa3.73□□□□□ -1.81
FGFR1-208ENST00000397108 KRTAP4-9Q9BYQ8 210 aa3.63□□□□□ -1.83
FGFR1-208ENST00000397108 LCE4AQ5TA78 99 aa3.55□□□□□ -1.84
FGFR1-208ENST00000397108 KRTAP5-4Q6L8H1 288 aa3.53□□□□□ -1.84
FGFR1-208ENST00000397108 LCE1DQ5T752 114 aa3.5□□□□□ -1.85
FGFR1-208ENST00000397108 PRM1P04553 51 aa3.48□□□□□ -1.85
FGFR1-208ENST00000397108 KRTAP5-5Q701N2 237 aaPredicted RBP3.47□□□□□ -1.85
FGFR1-208ENST00000397108 MT4P47944 62 aa3.47□□□□□ -1.85
FGFR1-208ENST00000397108 HMCN1Q96RW7 5635 aa3.44□□□□□ -1.86
FGFR1-208ENST00000397108 KRTAP4-6Q9BYQ5 205 aa3.4□□□□□ -1.87
FGFR1-208ENST00000397108 LCE3DQ9BYE3 92 aa3.38□□□□□ -1.87
FGFR1-208ENST00000397108 LCE3EQ5T5B0 92 aa3.36□□□□□ -1.87
FGFR1-208ENST00000397108 MT1AP04731 61 aa3.31□□□□□ -1.88
FGFR1-208ENST00000397108 KRTAP6-1Q3LI64 71 aa3.31□□□□□ -1.88
FGFR1-208ENST00000397108 KRTAP20-2Q3LI61 65 aa3.31□□□□□ -1.88
FGFR1-208ENST00000397108 GPR98Q8WXG9 6306 aa3.28□□□□□ -1.88
FGFR1-208ENST00000397108 AHNAK2Q8IVF2 5795 aa3.27□□□□□ -1.89
FGFR1-208ENST00000397108 KRTAP6-2Q3LI66 62 aa3.22□□□□□ -1.89
FGFR1-208ENST00000397108 KRTAP5-3Q6L8H2 238 aa3.21□□□□□ -1.9
FGFR1-208ENST00000397108 KRTAP5-10Q6L8G5 202 aa3.18□□□□□ -1.9
FGFR1-208ENST00000397108 KRTAP9-4Q9BYQ2 154 aa3.15□□□□□ -1.91
FGFR1-208ENST00000397108 KRTAP5-2Q701N4 177 aa3.13□□□□□ -1.91
FGFR1-208ENST00000397108 KRTAP5-7Q6L8G8 165 aa3.04□□□□□ -1.92
FGFR1-208ENST00000397108 LCE1EQ5T753 118 aa3.01□□□□□ -1.93
FGFR1-208ENST00000397108 MT3P25713 68 aa2.98□□□□□ -1.93
FGFR1-208ENST00000397108 KRTAP4-11Q9BYQ6 195 aa2.98□□□□□ -1.93
FGFR1-208ENST00000397108 KRTAP5-8O75690 187 aa2.87□□□□□ -1.95
FGFR1-208ENST00000397108 KRTAP5-1Q6L8H4 278 aa2.76□□□□□ -1.97
FGFR1-208ENST00000397108 KRTAP9-9Q9BYP9 154 aa2.69□□□□□ -1.98
FGFR1-208ENST00000397108 MUC5ACP98088 5654 aa2.67□□□□□ -1.98
FGFR1-208ENST00000397108 MUC5BQ9HC84 5762 aaPredicted RBP2.64□□□□□ -1.99
FGFR1-208ENST00000397108 AHNAKQ09666 5890 aaKnown RBP2.64□□□□□ -1.99
FGFR1-208ENST00000397108 KRTAP4-2Q9BYR5 136 aa2.54□□□□□ -2
FGFR1-208ENST00000397108 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
FGFR1-208ENST00000397108 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
FGFR1-208ENST00000397108 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
FGFR1-208ENST00000397108 LCE1FQ5T754 118 aa2.35□□□□□ -2.03
FGFR1-208ENST00000397108 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.32□□□□□ -2.04
FGFR1-208ENST00000397108 KRTAP5-11Q6L8G4 156 aa2.27□□□□□ -2.05
FGFR1-208ENST00000397108 KRTAP4-12Q9BQ66 201 aa2.21□□□□□ -2.06
FGFR1-208ENST00000397108 KRTAP4-4Q9BYR3 166 aa2.14□□□□□ -2.07
FGFR1-208ENST00000397108 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
FGFR1-208ENST00000397108 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
FGFR1-208ENST00000397108 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
FGFR1-208ENST00000397108 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 11.7 ms