RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 TNP1P09430 55 aa4.84□□□□□ -1.63
SEC13-206ENST00000397102 SERP1Q9Y6X1 66 aa4.84□□□□□ -1.63
SEC13-206ENST00000397102 SEC61GP60059 68 aa4.83□□□□□ -1.64
SEC13-206ENST00000397102 SYNE1Q8NF91 8797 aaKnown RBP4.83□□□□□ -1.64
SEC13-206ENST00000397102 PCP4L1A6NKN8 68 aa4.82□□□□□ -1.64
SEC13-206ENST00000397102 SPANXA2-OT1Q8N9U9 137 aa4.82□□□□□ -1.64
SEC13-206ENST00000397102 SMIM20Q8N5G0 67 aa4.8□□□□□ -1.64
SEC13-206ENST00000397102 A0A1B0GU33 70 aa4.79□□□□□ -1.64
SEC13-206ENST00000397102 KRTAP12-3P60328 96 aa4.78□□□□□ -1.64
SEC13-206ENST00000397102 SNURFQ9Y675 71 aa4.78□□□□□ -1.64
SEC13-206ENST00000397102 AHNAKQ09666 5890 aaKnown RBP4.73□□□□□ -1.65
SEC13-206ENST00000397102 MUC5ACP98088 5654 aa4.73□□□□□ -1.65
SEC13-206ENST00000397102 J3QR89 54 aa4.71□□□□□ -1.66
SEC13-206ENST00000397102 COA5Q86WW8 74 aa4.71□□□□□ -1.66
SEC13-206ENST00000397102 SVIPQ8NHG7 77 aa4.68□□□□□ -1.66
SEC13-206ENST00000397102 MUC5BQ9HC84 5762 aaPredicted RBP4.67□□□□□ -1.66
SEC13-206ENST00000397102 SMIM26A0A096LP01 95 aa4.67□□□□□ -1.66
SEC13-206ENST00000397102 KRTAP5-8O75690 187 aa4.67□□□□□ -1.66
SEC13-206ENST00000397102 KRTAP5-2Q701N4 177 aa4.67□□□□□ -1.66
SEC13-206ENST00000397102 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.63□□□□□ -1.67
SEC13-206ENST00000397102 A8MU10 97 aa4.62□□□□□ -1.67
SEC13-206ENST00000397102 A0A1B0GV90 55 aa4.52□□□□□ -1.69
SEC13-206ENST00000397102 KRTAP23-1A1A580 65 aa4.5□□□□□ -1.69
SEC13-206ENST00000397102 A0A1B0GU69 56 aa4.48□□□□□ -1.69
SEC13-206ENST00000397102 MT1AP04731 61 aa4.48□□□□□ -1.69
SEC13-206ENST00000397102 KRTAP6-1Q3LI64 71 aa4.48□□□□□ -1.69
SEC13-206ENST00000397102 OBSCNQ5VST9 7968 aa4.47□□□□□ -1.69
SEC13-206ENST00000397102 SERP2Q8N6R1 65 aa4.47□□□□□ -1.69
SEC13-206ENST00000397102 KRTAP6-2Q3LI66 62 aa4.37□□□□□ -1.71
SEC13-206ENST00000397102 KRTAP25-1Q3LHN0 102 aa4.35□□□□□ -1.71
SEC13-206ENST00000397102 LCE3CQ5T5A8 94 aa4.35□□□□□ -1.71
SEC13-206ENST00000397102 KRTAP5-11Q6L8G4 156 aa4.34□□□□□ -1.71
SEC13-206ENST00000397102 KRTAP15-1Q3LI76 137 aa4.3□□□□□ -1.72
SEC13-206ENST00000397102 K7ERU9 68 aa4.27□□□□□ -1.73
SEC13-206ENST00000397102 KRTAP5-1Q6L8H4 278 aa4.27□□□□□ -1.73
SEC13-206ENST00000397102 H7BZZ5 65 aa4.24□□□□□ -1.73
SEC13-206ENST00000397102 PRR15LQ9BU68 103 aa4.2□□□□□ -1.74
SEC13-206ENST00000397102 COX7CP15954 63 aa4.17□□□□□ -1.74
SEC13-206ENST00000397102 KRTAP9-6A8MVA2 160 aa4.12□□□□□ -1.75
SEC13-206ENST00000397102 MT3P25713 68 aa4.12□□□□□ -1.75
SEC13-206ENST00000397102 PCP4P48539 62 aa4.1□□□□□ -1.75
SEC13-206ENST00000397102 UQCR11O14957 56 aa4.05□□□□□ -1.76
SEC13-206ENST00000397102 LINC01558Q9Y6Z2 57 aa4.04□□□□□ -1.76
SEC13-206ENST00000397102 LCE1EQ5T753 118 aa3.97□□□□□ -1.77
SEC13-206ENST00000397102 A0A0A0MQY5 61 aa3.94□□□□□ -1.78
SEC13-206ENST00000397102 K7ERS5 55 aa3.93□□□□□ -1.78
SEC13-206ENST00000397102 MIR22HGQ0VDD5 57 aa3.9□□□□□ -1.79
SEC13-206ENST00000397102 ATP5EP56381 51 aaPredicted RBP3.82□□□□□ -1.8
SEC13-206ENST00000397102 KRTAP4-4Q9BYR3 166 aa3.82□□□□□ -1.8
SEC13-206ENST00000397102 RPS28P62857 69 aaKnown RBP3.78□□□□□ -1.8
SEC13-206ENST00000397102 ANAPC13Q9BS18 74 aa3.71□□□□□ -1.82
SEC13-206ENST00000397102 LCE1BQ5T7P3 118 aa3.7□□□□□ -1.82
SEC13-206ENST00000397102 CCDC179H3BU77 68 aa3.66□□□□□ -1.82
SEC13-206ENST00000397102 CDC42SE1Q9NRR8 79 aa3.65□□□□□ -1.83
SEC13-206ENST00000397102 LCE1CQ5T751 118 aa3.63□□□□□ -1.83
SEC13-206ENST00000397102 Q1T7F1 81 aa3.6□□□□□ -1.83
SEC13-206ENST00000397102 ROMO1P60602 79 aa3.55□□□□□ -1.84
SEC13-206ENST00000397102 PSPHP1O15172 72 aa3.52□□□□□ -1.85
SEC13-206ENST00000397102 TMEM258P61165 79 aa3.51□□□□□ -1.85
SEC13-206ENST00000397102 V9GYY9 64 aa3.44□□□□□ -1.86
SEC13-206ENST00000397102 A6NED7 52 aa3.37□□□□□ -1.87
SEC13-206ENST00000397102 LCE1FQ5T754 118 aa3.37□□□□□ -1.87
SEC13-206ENST00000397102 PHGR1C9JFL3 82 aa3.28□□□□□ -1.88
SEC13-206ENST00000397102 PRAC1Q96KF2 57 aa3.22□□□□□ -1.89
SEC13-206ENST00000397102 LCE3DQ9BYE3 92 aa3.03□□□□□ -1.92
SEC13-206ENST00000397102 NDUFAF8A1L188 74 aa3.01□□□□□ -1.93
SEC13-206ENST00000397102 KRTAP21-2Q3LI59 83 aa2.96□□□□□ -1.94
SEC13-206ENST00000397102 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
SEC13-206ENST00000397102 LCE3EQ5T5B0 92 aa2.77□□□□□ -1.97
SEC13-206ENST00000397102 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
SEC13-206ENST00000397102 BRK1Q8WUW1 75 aa2.28□□□□□ -2.04
SEC13-206ENST00000397102 PRO0628Q9UI54 55 aa2.13□□□□□ -2.07
SEC13-206ENST00000397102 PMAIP1Q13794 54 aa2.12□□□□□ -2.07
SEC13-206ENST00000397102 KTN1-AS1Q86SY8 53 aa1.99□□□□□ -2.09
SEC13-206ENST00000397102 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
SEC13-206ENST00000397102 LUZP6Q538Z0 58 aa1.94□□□□□ -2.1
SEC13-206ENST00000397102 PRM1P04553 51 aa1.78□□□□□ -2.12
SEC13-206ENST00000397102 INE1O15225 51 aa1.28□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 70.2 ms