RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 ROMO1P60602 79 aa10.55□□□□□ -0.72
CHCHD4-202ENST00000396914 LCE3BQ5TA77 95 aa10.52□□□□□ -0.73
CHCHD4-202ENST00000396914 KRTAP12-3P60328 96 aa10.51□□□□□ -0.73
CHCHD4-202ENST00000396914 MT1GP13640 62 aa10.49□□□□□ -0.73
CHCHD4-202ENST00000396914 MT1LQ93083 61 aa10.48□□□□□ -0.73
CHCHD4-202ENST00000396914 KRTAP2-2Q9BYT5 123 aa10.46□□□□□ -0.74
CHCHD4-202ENST00000396914 KRTAP2-1Q9BYU5 128 aa10.46□□□□□ -0.74
CHCHD4-202ENST00000396914 PP632Q6XCG6 107 aa10.45□□□□□ -0.74
CHCHD4-202ENST00000396914 KRTAP23-1A1A580 65 aa10.36□□□□□ -0.75
CHCHD4-202ENST00000396914 MT1MQ8N339 61 aa10.32□□□□□ -0.76
CHCHD4-202ENST00000396914 BRK1Q8WUW1 75 aa10.32□□□□□ -0.76
CHCHD4-202ENST00000396914 DSTQ03001 7570 aaKnown RBP10.16□□□□□ -0.78
CHCHD4-202ENST00000396914 KRTAP4-3Q9BYR4 195 aa10.09□□□□□ -0.79
CHCHD4-202ENST00000396914 KRTAP4-7Q9BYR0 210 aa10.04□□□□□ -0.8
CHCHD4-202ENST00000396914 KRTAP15-1Q3LI76 137 aa10□□□□□ -0.81
CHCHD4-202ENST00000396914 KRTAP19-4Q3LI73 84 aa9.87□□□□□ -0.83
CHCHD4-202ENST00000396914 LCE3CQ5T5A8 94 aa9.73□□□□□ -0.85
CHCHD4-202ENST00000396914 PMAIP1Q13794 54 aa9.71□□□□□ -0.86
CHCHD4-202ENST00000396914 KRTAP4-9Q9BYQ8 210 aa9.66□□□□□ -0.86
CHCHD4-202ENST00000396914 LCE4AQ5TA78 99 aa9.58□□□□□ -0.88
CHCHD4-202ENST00000396914 MT4P47944 62 aa9.49□□□□□ -0.89
CHCHD4-202ENST00000396914 LOC100996750A0A140TA64 210 aa9.48□□□□□ -0.89
CHCHD4-202ENST00000396914 LCE1DQ5T752 114 aa9.47□□□□□ -0.89
CHCHD4-202ENST00000396914 KRTAP5-4Q6L8H1 288 aa9.46□□□□□ -0.9
CHCHD4-202ENST00000396914 PRO0628Q9UI54 55 aa9.39□□□□□ -0.91
CHCHD4-202ENST00000396914 KRTAP5-5Q701N2 237 aaPredicted RBP9.35□□□□□ -0.91
CHCHD4-202ENST00000396914 HMCN1Q96RW7 5635 aa9.23□□□□□ -0.93
CHCHD4-202ENST00000396914 PRAC1Q96KF2 57 aa9.22□□□□□ -0.93
CHCHD4-202ENST00000396914 KRTAP4-6Q9BYQ5 205 aa9.22□□□□□ -0.93
CHCHD4-202ENST00000396914 KRTAP9-6A8MVA2 160 aa9.12□□□□□ -0.95
CHCHD4-202ENST00000396914 KRTAP12-4P60329 112 aa9.07□□□□□ -0.96
CHCHD4-202ENST00000396914 SPRR5A0A1B0GTR4 108 aa8.94□□□□□ -0.98
CHCHD4-202ENST00000396914 KRTAP20-2Q3LI61 65 aa8.94□□□□□ -0.98
CHCHD4-202ENST00000396914 MT1AP04731 61 aa8.92□□□□□ -0.98
CHCHD4-202ENST00000396914 KTN1-AS1Q86SY8 53 aa8.88□□□□□ -0.99
CHCHD4-202ENST00000396914 KRTAP6-1Q3LI64 71 aa8.86□□□□□ -0.99
CHCHD4-202ENST00000396914 SYNE1Q8NF91 8797 aaKnown RBP8.82□□□□□ -1
CHCHD4-202ENST00000396914 GPR98Q8WXG9 6306 aa8.7□□□□□ -1.02
CHCHD4-202ENST00000396914 AHNAK2Q8IVF2 5795 aa8.66□□□□□ -1.02
CHCHD4-202ENST00000396914 KRTAP5-3Q6L8H2 238 aa8.61□□□□□ -1.03
CHCHD4-202ENST00000396914 KRTAP9-4Q9BYQ2 154 aa8.58□□□□□ -1.04
CHCHD4-202ENST00000396914 SVIPQ8NHG7 77 aa8.56□□□□□ -1.04
CHCHD4-202ENST00000396914 KRTAP5-10Q6L8G5 202 aa8.46□□□□□ -1.06
CHCHD4-202ENST00000396914 KRTAP6-2Q3LI66 62 aa8.37□□□□□ -1.07
CHCHD4-202ENST00000396914 KRTAP5-2Q701N4 177 aa8.37□□□□□ -1.07
CHCHD4-202ENST00000396914 MT3P25713 68 aa8.17□□□□□ -1.1
CHCHD4-202ENST00000396914 KRTAP5-7Q6L8G8 165 aa8.04□□□□□ -1.12
CHCHD4-202ENST00000396914 KRTAP4-11Q9BYQ6 195 aa8.03□□□□□ -1.12
CHCHD4-202ENST00000396914 LUZP6Q538Z0 58 aa7.76□□□□□ -1.17
CHCHD4-202ENST00000396914 OBSCNQ5VST9 7968 aa7.75□□□□□ -1.17
CHCHD4-202ENST00000396914 KRTAP5-8O75690 187 aa7.72□□□□□ -1.17
CHCHD4-202ENST00000396914 KRTAP5-1Q6L8H4 278 aa7.42□□□□□ -1.22
CHCHD4-202ENST00000396914 LCE1EQ5T753 118 aa7.31□□□□□ -1.24
CHCHD4-202ENST00000396914 KRTAP9-9Q9BYP9 154 aa7.29□□□□□ -1.24
CHCHD4-202ENST00000396914 MUC5ACP98088 5654 aa7.19□□□□□ -1.26
CHCHD4-202ENST00000396914 LCE3DQ9BYE3 92 aa7.14□□□□□ -1.27
CHCHD4-202ENST00000396914 MUC5BQ9HC84 5762 aaPredicted RBP7.02□□□□□ -1.28
CHCHD4-202ENST00000396914 LCE1BQ5T7P3 118 aa6.96□□□□□ -1.3
CHCHD4-202ENST00000396914 AHNAKQ09666 5890 aaKnown RBP6.93□□□□□ -1.3
CHCHD4-202ENST00000396914 KRTAP4-2Q9BYR5 136 aa6.84□□□□□ -1.31
CHCHD4-202ENST00000396914 LCE3EQ5T5B0 92 aa6.81□□□□□ -1.32
CHCHD4-202ENST00000396914 LCE1CQ5T751 118 aa6.79□□□□□ -1.32
CHCHD4-202ENST00000396914 NDUFAF8A1L188 74 aa6.71□□□□□ -1.34
CHCHD4-202ENST00000396914 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.2□□□□□ -1.42
CHCHD4-202ENST00000396914 KRTAP4-12Q9BQ66 201 aa6.11□□□□□ -1.43
CHCHD4-202ENST00000396914 KRTAP5-11Q6L8G4 156 aa6.08□□□□□ -1.44
CHCHD4-202ENST00000396914 LCE1FQ5T754 118 aa5.8□□□□□ -1.48
CHCHD4-202ENST00000396914 KRTAP21-2Q3LI59 83 aa5.79□□□□□ -1.48
CHCHD4-202ENST00000396914 H3BS24 57 aa5.62□□□□□ -1.51
CHCHD4-202ENST00000396914 A0A0A0MQY5 61 aa5.58□□□□□ -1.52
CHCHD4-202ENST00000396914 INE1O15225 51 aa5.44□□□□□ -1.54
CHCHD4-202ENST00000396914 PRM1P04553 51 aa5.44□□□□□ -1.54
CHCHD4-202ENST00000396914 KRTAP4-4Q9BYR3 166 aa5.31□□□□□ -1.56
CHCHD4-202ENST00000396914 PHGR1C9JFL3 82 aa5.25□□□□□ -1.57
CHCHD4-202ENST00000396914 MUC19Q7Z5P9 8384 aa4.7□□□□□ -1.66
CHCHD4-202ENST00000396914 KRTAP21-1Q3LI58 79 aa3.73□□□□□ -1.81
CHCHD4-202ENST00000396914 MUC16Q8WXI7 14507 aa3.38□□□□□ -1.87
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms