RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 KRTAP8-1Q8IUC2 63 aa3.11□□□□□ -1.91
NDE1-202ENST00000396355 SPRR2EP22531 72 aa3.1□□□□□ -1.91
NDE1-202ENST00000396355 SPRR2BP35325 72 aa3.1□□□□□ -1.91
NDE1-202ENST00000396355 SPRR2AP35326 72 aa3.1□□□□□ -1.91
NDE1-202ENST00000396355 KRTAP10-7P60409 375 aaPredicted RBP3.09□□□□□ -1.92
NDE1-202ENST00000396355 KRTAP12-4P60329 112 aa3.08□□□□□ -1.92
NDE1-202ENST00000396355 MUC12Q9UKN1 5478 aa3.06□□□□□ -1.92
NDE1-202ENST00000396355 KRTAP2-3P0C7H8 128 aa3.04□□□□□ -1.92
NDE1-202ENST00000396355 KRTAP2-4Q9BYR9 128 aa3.04□□□□□ -1.92
NDE1-202ENST00000396355 LCE3CQ5T5A8 94 aa3.04□□□□□ -1.92
NDE1-202ENST00000396355 KRTAP19-5Q3LI72 72 aa3□□□□□ -1.93
NDE1-202ENST00000396355 SPRR2DP22532 72 aa3□□□□□ -1.93
NDE1-202ENST00000396355 MDN1Q9NU22 5596 aa2.97□□□□□ -1.93
NDE1-202ENST00000396355 KRTAP2-2Q9BYT5 123 aa2.94□□□□□ -1.94
NDE1-202ENST00000396355 KRTAP2-1Q9BYU5 128 aa2.94□□□□□ -1.94
NDE1-202ENST00000396355 KRTAP4-7Q9BYR0 210 aa2.93□□□□□ -1.94
NDE1-202ENST00000396355 KRTAP4-8A0A0G2JLE6 195 aa2.93□□□□□ -1.94
NDE1-202ENST00000396355 KRTAP4-8Q9BYQ9 185 aa2.93□□□□□ -1.94
NDE1-202ENST00000396355 DSTQ03001 7570 aaKnown RBP2.92□□□□□ -1.94
NDE1-202ENST00000396355 KRTAP5-9P26371 169 aa2.88□□□□□ -1.95
NDE1-202ENST00000396355 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
NDE1-202ENST00000396355 LCE3BQ5TA77 95 aa2.87□□□□□ -1.95
NDE1-202ENST00000396355 GPR98Q8WXG9 6306 aa2.86□□□□□ -1.95
NDE1-202ENST00000396355 KRTAP9-6A8MVA2 160 aa2.84□□□□□ -1.95
NDE1-202ENST00000396355 KRTAP19-7Q3SYF9 63 aa2.82□□□□□ -1.96
NDE1-202ENST00000396355 LCE1AQ5T7P2 110 aa2.82□□□□□ -1.96
NDE1-202ENST00000396355 PRM1P04553 51 aa2.77□□□□□ -1.97
NDE1-202ENST00000396355 KRTAP4-9Q9BYQ8 210 aa2.77□□□□□ -1.97
NDE1-202ENST00000396355 MT1GP13640 62 aa2.74□□□□□ -1.97
NDE1-202ENST00000396355 MT1EP04732 61 aa2.72□□□□□ -1.97
NDE1-202ENST00000396355 MT1LQ93083 61 aa2.71□□□□□ -1.98
NDE1-202ENST00000396355 LOC100996750A0A140TA64 210 aa2.69□□□□□ -1.98
NDE1-202ENST00000396355 MT4P47944 62 aa2.69□□□□□ -1.98
NDE1-202ENST00000396355 LCE3DQ9BYE3 92 aa2.64□□□□□ -1.99
NDE1-202ENST00000396355 KRTAP4-3Q9BYR4 195 aa2.63□□□□□ -1.99
NDE1-202ENST00000396355 LCE3EQ5T5B0 92 aa2.61□□□□□ -1.99
NDE1-202ENST00000396355 LCE1EQ5T753 118 aa2.61□□□□□ -1.99
NDE1-202ENST00000396355 KRTAP19-3Q7Z4W3 81 aa2.58□□□□□ -2
NDE1-202ENST00000396355 KRTAP19-4Q3LI73 84 aa2.57□□□□□ -2
NDE1-202ENST00000396355 LCE1DQ5T752 114 aa2.56□□□□□ -2
NDE1-202ENST00000396355 MT1MQ8N339 61 aa2.53□□□□□ -2
NDE1-202ENST00000396355 LCE4AQ5TA78 99 aa2.49□□□□□ -2.01
NDE1-202ENST00000396355 LCE5AQ5TCM9 118 aa2.49□□□□□ -2.01
NDE1-202ENST00000396355 KRTAP9-4Q9BYQ2 154 aa2.49□□□□□ -2.01
NDE1-202ENST00000396355 HMCN1Q96RW7 5635 aa2.44□□□□□ -2.02
NDE1-202ENST00000396355 KRTAP9-9Q9BYP9 154 aa2.44□□□□□ -2.02
NDE1-202ENST00000396355 KRTAP4-6Q9BYQ5 205 aa2.41□□□□□ -2.02
NDE1-202ENST00000396355 KRTAP6-2Q3LI66 62 aa2.39□□□□□ -2.03
NDE1-202ENST00000396355 AHNAK2Q8IVF2 5795 aa2.37□□□□□ -2.03
NDE1-202ENST00000396355 KRTAP5-3Q6L8H2 238 aa2.35□□□□□ -2.03
NDE1-202ENST00000396355 KRTAP6-1Q3LI64 71 aa2.33□□□□□ -2.04
NDE1-202ENST00000396355 KRTAP5-10Q6L8G5 202 aa2.31□□□□□ -2.04
NDE1-202ENST00000396355 KRTAP5-5Q701N2 237 aaPredicted RBP2.27□□□□□ -2.05
NDE1-202ENST00000396355 KRTAP20-2Q3LI61 65 aa2.25□□□□□ -2.05
NDE1-202ENST00000396355 MT1AP04731 61 aa2.24□□□□□ -2.05
NDE1-202ENST00000396355 KRTAP5-7Q6L8G8 165 aa2.24□□□□□ -2.05
NDE1-202ENST00000396355 LCE1FQ5T754 118 aa2.23□□□□□ -2.05
NDE1-202ENST00000396355 KRTAP5-4Q6L8H1 288 aa2.22□□□□□ -2.05
NDE1-202ENST00000396355 KRTAP4-12Q9BQ66 201 aa2.16□□□□□ -2.06
NDE1-202ENST00000396355 KRTAP4-11Q9BYQ6 195 aa2.15□□□□□ -2.07
NDE1-202ENST00000396355 MT3P25713 68 aa2.14□□□□□ -2.07
NDE1-202ENST00000396355 AHNAKQ09666 5890 aaKnown RBP2.13□□□□□ -2.07
NDE1-202ENST00000396355 KRTAP5-8O75690 187 aa2.05□□□□□ -2.08
NDE1-202ENST00000396355 LCE1BQ5T7P3 118 aa2.05□□□□□ -2.08
NDE1-202ENST00000396355 MUC5BQ9HC84 5762 aaPredicted RBP2.04□□□□□ -2.08
NDE1-202ENST00000396355 MUC5ACP98088 5654 aa1.97□□□□□ -2.09
NDE1-202ENST00000396355 KRTAP5-2Q701N4 177 aa1.87□□□□□ -2.11
NDE1-202ENST00000396355 KRTAP4-2Q9BYR5 136 aa1.81□□□□□ -2.12
NDE1-202ENST00000396355 KRTAP5-1Q6L8H4 278 aa1.76□□□□□ -2.13
NDE1-202ENST00000396355 LCE1CQ5T751 118 aa1.72□□□□□ -2.13
NDE1-202ENST00000396355 KRTAP4-4Q9BYR3 166 aa1.72□□□□□ -2.13
NDE1-202ENST00000396355 PHGR1C9JFL3 82 aa1.57□□□□□ -2.16
NDE1-202ENST00000396355 KRTAP21-2Q3LI59 83 aa1.51□□□□□ -2.17
NDE1-202ENST00000396355 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.48□□□□□ -2.17
NDE1-202ENST00000396355 KRTAP5-11Q6L8G4 156 aa1.4□□□□□ -2.19
NDE1-202ENST00000396355 KRTAP21-1Q3LI58 79 aa1.36□□□□□ -2.19
NDE1-202ENST00000396355 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 122.3 ms