RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 KRTAP10-5P60370 271 aa3.72□□□□□ -1.81
NDE1-201ENST00000396354 SPRR5A0A1B0GTR4 108 aa3.7□□□□□ -1.82
NDE1-201ENST00000396354 KRTAP10-7P60409 375 aaPredicted RBP3.67□□□□□ -1.82
NDE1-201ENST00000396354 KRTAP4-2Q9BYR5 136 aa3.67□□□□□ -1.82
NDE1-201ENST00000396354 KRTAP10-12P60413 245 aa3.66□□□□□ -1.82
NDE1-201ENST00000396354 KRTAP12-3P60328 96 aa3.64□□□□□ -1.83
NDE1-201ENST00000396354 SSPOA2VEC9 5147 aa3.58□□□□□ -1.84
NDE1-201ENST00000396354 INE1O15225 51 aa3.57□□□□□ -1.84
NDE1-201ENST00000396354 KRTAP8-1Q8IUC2 63 aa3.55□□□□□ -1.84
NDE1-201ENST00000396354 DSTQ03001 7570 aaKnown RBP3.54□□□□□ -1.84
NDE1-201ENST00000396354 KRTAP19-5Q3LI72 72 aa3.51□□□□□ -1.85
NDE1-201ENST00000396354 KRTAP2-2Q9BYT5 123 aa3.5□□□□□ -1.85
NDE1-201ENST00000396354 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
NDE1-201ENST00000396354 FCGBPQ9Y6R7 5405 aaPredicted RBP3.43□□□□□ -1.86
NDE1-201ENST00000396354 KRTAP19-6Q3LI70 58 aa3.43□□□□□ -1.86
NDE1-201ENST00000396354 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
NDE1-201ENST00000396354 CRCT1Q9UGL9 99 aa3.41□□□□□ -1.86
NDE1-201ENST00000396354 MUC12Q9UKN1 5478 aa3.4□□□□□ -1.87
NDE1-201ENST00000396354 SYNE1Q8NF91 8797 aaKnown RBP3.38□□□□□ -1.87
NDE1-201ENST00000396354 LCE3CQ5T5A8 94 aa3.36□□□□□ -1.87
NDE1-201ENST00000396354 KRTAP9-6A8MVA2 160 aa3.34□□□□□ -1.88
NDE1-201ENST00000396354 KRTAP19-7Q3SYF9 63 aa3.33□□□□□ -1.88
NDE1-201ENST00000396354 MACF1Q9UPN3 7388 aaKnown RBP3.29□□□□□ -1.88
NDE1-201ENST00000396354 KRTAP4-3Q9BYR4 195 aa3.23□□□□□ -1.89
NDE1-201ENST00000396354 MT1EP04732 61 aa3.21□□□□□ -1.89
NDE1-201ENST00000396354 SYNE2Q8WXH0 6885 aaKnown RBP3.2□□□□□ -1.9
NDE1-201ENST00000396354 MT1LQ93083 61 aa3.19□□□□□ -1.9
NDE1-201ENST00000396354 MT1GP13640 62 aa3.15□□□□□ -1.91
NDE1-201ENST00000396354 KRTAP5-3Q6L8H2 238 aa3.13□□□□□ -1.91
NDE1-201ENST00000396354 MDN1Q9NU22 5596 aa3.11□□□□□ -1.91
NDE1-201ENST00000396354 SPRR2FQ96RM1 72 aa3.1□□□□□ -1.91
NDE1-201ENST00000396354 KRTAP2-3P0C7H8 128 aa3.03□□□□□ -1.92
NDE1-201ENST00000396354 KRTAP2-4Q9BYR9 128 aa3.03□□□□□ -1.92
NDE1-201ENST00000396354 KRTAP2-1Q9BYU5 128 aa3.03□□□□□ -1.92
NDE1-201ENST00000396354 KRTAP5-9P26371 169 aa3.03□□□□□ -1.92
NDE1-201ENST00000396354 KRTAP6-3Q3LI67 103 aa3.02□□□□□ -1.93
NDE1-201ENST00000396354 MT1MQ8N339 61 aa3.01□□□□□ -1.93
NDE1-201ENST00000396354 KRTAP19-3Q7Z4W3 81 aa3□□□□□ -1.93
NDE1-201ENST00000396354 SPRR2EP22531 72 aa2.95□□□□□ -1.94
NDE1-201ENST00000396354 SPRR2BP35325 72 aa2.95□□□□□ -1.94
NDE1-201ENST00000396354 SPRR2AP35326 72 aa2.95□□□□□ -1.94
NDE1-201ENST00000396354 KRTAP12-4P60329 112 aa2.94□□□□□ -1.94
NDE1-201ENST00000396354 LCE1EQ5T753 118 aa2.9□□□□□ -1.94
NDE1-201ENST00000396354 NEBP20929 6669 aa2.88□□□□□ -1.95
NDE1-201ENST00000396354 LCE3EQ5T5B0 92 aa2.85□□□□□ -1.95
NDE1-201ENST00000396354 SPRR2DP22532 72 aa2.84□□□□□ -1.96
NDE1-201ENST00000396354 KRTAP6-1Q3LI64 71 aa2.76□□□□□ -1.97
NDE1-201ENST00000396354 KRTAP5-5Q701N2 237 aaPredicted RBP2.7□□□□□ -1.98
NDE1-201ENST00000396354 LCE3DQ9BYE3 92 aa2.66□□□□□ -1.98
NDE1-201ENST00000396354 KRTAP20-1Q3LI63 56 aa2.66□□□□□ -1.98
NDE1-201ENST00000396354 MT1AP04731 61 aa2.64□□□□□ -1.99
NDE1-201ENST00000396354 PRM1P04553 51 aa2.63□□□□□ -1.99
NDE1-201ENST00000396354 KRTAP5-11Q6L8G4 156 aa2.59□□□□□ -2
NDE1-201ENST00000396354 MT4P47944 62 aa2.51□□□□□ -2.01
NDE1-201ENST00000396354 KRTAP6-2Q3LI66 62 aa2.5□□□□□ -2.01
NDE1-201ENST00000396354 KRTAP5-4Q6L8H1 288 aa2.5□□□□□ -2.01
NDE1-201ENST00000396354 HMCN1Q96RW7 5635 aa2.46□□□□□ -2.02
NDE1-201ENST00000396354 KRTAP20-2Q3LI61 65 aa2.38□□□□□ -2.03
NDE1-201ENST00000396354 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.32□□□□□ -2.04
NDE1-201ENST00000396354 KRTAP5-2Q701N4 177 aa2.25□□□□□ -2.05
NDE1-201ENST00000396354 GPR98Q8WXG9 6306 aa2.23□□□□□ -2.05
NDE1-201ENST00000396354 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
NDE1-201ENST00000396354 AHNAK2Q8IVF2 5795 aa2.21□□□□□ -2.06
NDE1-201ENST00000396354 LCE1BQ5T7P3 118 aa2.17□□□□□ -2.06
NDE1-201ENST00000396354 MUC5ACP98088 5654 aa2.16□□□□□ -2.06
NDE1-201ENST00000396354 KRTAP5-1Q6L8H4 278 aa2.12□□□□□ -2.07
NDE1-201ENST00000396354 MUC5BQ9HC84 5762 aaPredicted RBP2.1□□□□□ -2.07
NDE1-201ENST00000396354 KRTAP5-10Q6L8G5 202 aa2.06□□□□□ -2.08
NDE1-201ENST00000396354 KRTAP5-8O75690 187 aa2□□□□□ -2.09
NDE1-201ENST00000396354 LCE1CQ5T751 118 aa1.96□□□□□ -2.09
NDE1-201ENST00000396354 KRTAP5-7Q6L8G8 165 aa1.9□□□□□ -2.11
NDE1-201ENST00000396354 KRTAP4-4Q9BYR3 166 aa1.88□□□□□ -2.11
NDE1-201ENST00000396354 AHNAKQ09666 5890 aaKnown RBP1.81□□□□□ -2.12
NDE1-201ENST00000396354 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
NDE1-201ENST00000396354 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
NDE1-201ENST00000396354 PHGR1C9JFL3 82 aa1.42□□□□□ -2.18
NDE1-201ENST00000396354 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 60.5 ms