RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 MT1XP80297 61 aa2.9□□□□□ -1.95
SMAD1-202ENST00000394092 LCE1EQ5T753 118 aa2.88□□□□□ -1.95
SMAD1-202ENST00000394092 LCE1AQ5T7P2 110 aa2.88□□□□□ -1.95
SMAD1-202ENST00000394092 KRTAP5-1Q6L8H4 278 aa2.88□□□□□ -1.95
SMAD1-202ENST00000394092 KRTAP10-12P60413 245 aa2.87□□□□□ -1.95
SMAD1-202ENST00000394092 KRTAP8-1Q8IUC2 63 aa2.87□□□□□ -1.95
SMAD1-202ENST00000394092 SPRR5A0A1B0GTR4 108 aa2.86□□□□□ -1.95
SMAD1-202ENST00000394092 KRTAP5-9P26371 169 aa2.85□□□□□ -1.95
SMAD1-202ENST00000394092 KRTAP5-4Q6L8H1 288 aa2.82□□□□□ -1.96
SMAD1-202ENST00000394092 KRTAP12-3P60328 96 aa2.8□□□□□ -1.96
SMAD1-202ENST00000394092 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
SMAD1-202ENST00000394092 KRTAP2-2Q9BYT5 123 aa2.78□□□□□ -1.96
SMAD1-202ENST00000394092 KRTAP19-5Q3LI72 72 aa2.68□□□□□ -1.98
SMAD1-202ENST00000394092 USH2AO75445 5202 aa2.66□□□□□ -1.98
SMAD1-202ENST00000394092 LCE3CQ5T5A8 94 aa2.63□□□□□ -1.99
SMAD1-202ENST00000394092 CRCT1Q9UGL9 99 aa2.63□□□□□ -1.99
SMAD1-202ENST00000394092 SSPOA2VEC9 5147 aa2.61□□□□□ -1.99
SMAD1-202ENST00000394092 KRTAP19-6Q3LI70 58 aa2.61□□□□□ -1.99
SMAD1-202ENST00000394092 FSIP2Q5CZC0 6907 aa2.61□□□□□ -1.99
SMAD1-202ENST00000394092 KRTAP19-7Q3SYF9 63 aa2.58□□□□□ -2
SMAD1-202ENST00000394092 KMT2DO14686 5537 aa2.56□□□□□ -2
SMAD1-202ENST00000394092 MT1EP04732 61 aa2.53□□□□□ -2
SMAD1-202ENST00000394092 MT1LQ93083 61 aa2.52□□□□□ -2.01
SMAD1-202ENST00000394092 INE1O15225 51 aa2.5□□□□□ -2.01
SMAD1-202ENST00000394092 KRTAP9-6A8MVA2 160 aa2.45□□□□□ -2.02
SMAD1-202ENST00000394092 KRTAP4-3Q9BYR4 195 aa2.44□□□□□ -2.02
SMAD1-202ENST00000394092 GPR98Q8WXG9 6306 aa2.43□□□□□ -2.02
SMAD1-202ENST00000394092 MT1GP13640 62 aa2.41□□□□□ -2.02
SMAD1-202ENST00000394092 KRTAP19-3Q7Z4W3 81 aa2.41□□□□□ -2.02
SMAD1-202ENST00000394092 KRTAP2-3P0C7H8 128 aa2.4□□□□□ -2.03
SMAD1-202ENST00000394092 KRTAP2-4Q9BYR9 128 aa2.4□□□□□ -2.03
SMAD1-202ENST00000394092 KRTAP2-1Q9BYU5 128 aa2.4□□□□□ -2.03
SMAD1-202ENST00000394092 FCGBPQ9Y6R7 5405 aaPredicted RBP2.39□□□□□ -2.03
SMAD1-202ENST00000394092 KRTAP5-2Q701N4 177 aa2.39□□□□□ -2.03
SMAD1-202ENST00000394092 MT1MQ8N339 61 aa2.37□□□□□ -2.03
SMAD1-202ENST00000394092 OBSCNQ5VST9 7968 aa2.36□□□□□ -2.03
SMAD1-202ENST00000394092 NEBP20929 6669 aa2.36□□□□□ -2.03
SMAD1-202ENST00000394092 SPRR2FQ96RM1 72 aa2.34□□□□□ -2.03
SMAD1-202ENST00000394092 MT3P25713 68 aa2.32□□□□□ -2.04
SMAD1-202ENST00000394092 MUC12Q9UKN1 5478 aa2.3□□□□□ -2.04
SMAD1-202ENST00000394092 KRTAP20-1Q3LI63 56 aa2.3□□□□□ -2.04
SMAD1-202ENST00000394092 MACF1Q9UPN3 7388 aaKnown RBP2.29□□□□□ -2.04
SMAD1-202ENST00000394092 SYNE2Q8WXH0 6885 aaKnown RBP2.28□□□□□ -2.04
SMAD1-202ENST00000394092 SPRR2EP22531 72 aa2.18□□□□□ -2.06
SMAD1-202ENST00000394092 SPRR2BP35325 72 aa2.18□□□□□ -2.06
SMAD1-202ENST00000394092 SPRR2AP35326 72 aa2.18□□□□□ -2.06
SMAD1-202ENST00000394092 DSTQ03001 7570 aaKnown RBP2.16□□□□□ -2.06
SMAD1-202ENST00000394092 MT1AP04731 61 aa2.15□□□□□ -2.06
SMAD1-202ENST00000394092 KRTAP6-3Q3LI67 103 aa2.13□□□□□ -2.07
SMAD1-202ENST00000394092 MDN1Q9NU22 5596 aa2.12□□□□□ -2.07
SMAD1-202ENST00000394092 KRTAP6-1Q3LI64 71 aa2.11□□□□□ -2.07
SMAD1-202ENST00000394092 KRTAP5-5Q701N2 237 aaPredicted RBP2.11□□□□□ -2.07
SMAD1-202ENST00000394092 LCE1FQ5T754 118 aa2.1□□□□□ -2.07
SMAD1-202ENST00000394092 SPRR2DP22532 72 aa2.09□□□□□ -2.07
SMAD1-202ENST00000394092 KRTAP12-4P60329 112 aa2.08□□□□□ -2.08
SMAD1-202ENST00000394092 KRTAP5-8O75690 187 aa2.04□□□□□ -2.08
SMAD1-202ENST00000394092 SYNE1Q8NF91 8797 aaKnown RBP2.03□□□□□ -2.08
SMAD1-202ENST00000394092 AHNAK2Q8IVF2 5795 aa2.03□□□□□ -2.08
SMAD1-202ENST00000394092 LCE3DQ9BYE3 92 aa2.02□□□□□ -2.09
SMAD1-202ENST00000394092 LCE3EQ5T5B0 92 aa1.99□□□□□ -2.09
SMAD1-202ENST00000394092 KRTAP6-2Q3LI66 62 aa1.91□□□□□ -2.1
SMAD1-202ENST00000394092 KRTAP5-7Q6L8G8 165 aa1.9□□□□□ -2.11
SMAD1-202ENST00000394092 AHNAKQ09666 5890 aaKnown RBP1.89□□□□□ -2.11
SMAD1-202ENST00000394092 MUC5BQ9HC84 5762 aaPredicted RBP1.86□□□□□ -2.11
SMAD1-202ENST00000394092 LCE1CQ5T751 118 aa1.85□□□□□ -2.11
SMAD1-202ENST00000394092 LCE1BQ5T7P3 118 aa1.85□□□□□ -2.11
SMAD1-202ENST00000394092 PRM1P04553 51 aa1.83□□□□□ -2.12
SMAD1-202ENST00000394092 KRTAP5-10Q6L8G5 202 aa1.83□□□□□ -2.12
SMAD1-202ENST00000394092 MT4P47944 62 aa1.79□□□□□ -2.12
SMAD1-202ENST00000394092 KRTAP20-2Q3LI61 65 aa1.79□□□□□ -2.12
SMAD1-202ENST00000394092 HMCN1Q96RW7 5635 aa1.73□□□□□ -2.13
SMAD1-202ENST00000394092 MUC5ACP98088 5654 aa1.67□□□□□ -2.14
SMAD1-202ENST00000394092 MUC19Q7Z5P9 8384 aa1.5□□□□□ -2.17
SMAD1-202ENST00000394092 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
SMAD1-202ENST00000394092 KRTAP21-1Q3LI58 79 aa1.16□□□□□ -2.22
SMAD1-202ENST00000394092 PHGR1C9JFL3 82 aa1.13□□□□□ -2.23
SMAD1-202ENST00000394092 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 85.5 ms