RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 KRTAP19-4Q3LI73 84 aa3.36□□□□□ -1.87
TDP1-203ENST00000393454 FCGBPQ9Y6R7 5405 aaPredicted RBP3.34□□□□□ -1.88
TDP1-203ENST00000393454 KRTAP9-7A8MTY7 169 aa3.33□□□□□ -1.88
TDP1-203ENST00000393454 KRTAP8-1Q8IUC2 63 aa3.31□□□□□ -1.88
TDP1-203ENST00000393454 LCE5AQ5TCM9 118 aa3.28□□□□□ -1.89
TDP1-203ENST00000393454 KRTAP12-3P60328 96 aa3.27□□□□□ -1.89
TDP1-203ENST00000393454 KMT2DO14686 5537 aa3.26□□□□□ -1.89
TDP1-203ENST00000393454 KRTAP19-5Q3LI72 72 aa3.25□□□□□ -1.89
TDP1-203ENST00000393454 MACF1Q9UPN3 7388 aaKnown RBP3.23□□□□□ -1.89
TDP1-203ENST00000393454 SYNE2Q8WXH0 6885 aaKnown RBP3.21□□□□□ -1.9
TDP1-203ENST00000393454 KRTAP19-7Q3SYF9 63 aa3.17□□□□□ -1.9
TDP1-203ENST00000393454 MT1EP04732 61 aa3.12□□□□□ -1.91
TDP1-203ENST00000393454 KRTAP6-3Q3LI67 103 aa3.08□□□□□ -1.92
TDP1-203ENST00000393454 SPRR2FQ96RM1 72 aa3.08□□□□□ -1.92
TDP1-203ENST00000393454 MT1LQ93083 61 aa3.07□□□□□ -1.92
TDP1-203ENST00000393454 LCE3CQ5T5A8 94 aa3.05□□□□□ -1.92
TDP1-203ENST00000393454 SPRR5A0A1B0GTR4 108 aa3.04□□□□□ -1.92
TDP1-203ENST00000393454 LUZP6Q538Z0 58 aa3.02□□□□□ -1.93
TDP1-203ENST00000393454 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.02□□□□□ -1.93
TDP1-203ENST00000393454 MUC12Q9UKN1 5478 aa3.01□□□□□ -1.93
TDP1-203ENST00000393454 KRTAP19-3Q7Z4W3 81 aa3□□□□□ -1.93
TDP1-203ENST00000393454 NEBP20929 6669 aa2.99□□□□□ -1.93
TDP1-203ENST00000393454 KRTAP5-9P26371 169 aa2.98□□□□□ -1.93
TDP1-203ENST00000393454 MT1GP13640 62 aa2.97□□□□□ -1.93
TDP1-203ENST00000393454 NDUFAF8A1L188 74 aa2.97□□□□□ -1.93
TDP1-203ENST00000393454 MT1MQ8N339 61 aa2.94□□□□□ -1.94
TDP1-203ENST00000393454 MDN1Q9NU22 5596 aa2.94□□□□□ -1.94
TDP1-203ENST00000393454 SPRR2EP22531 72 aa2.91□□□□□ -1.94
TDP1-203ENST00000393454 SPRR2BP35325 72 aa2.91□□□□□ -1.94
TDP1-203ENST00000393454 SPRR2AP35326 72 aa2.91□□□□□ -1.94
TDP1-203ENST00000393454 KRTAP4-3Q9BYR4 195 aa2.91□□□□□ -1.94
TDP1-203ENST00000393454 LCE1AQ5T7P2 110 aa2.91□□□□□ -1.94
TDP1-203ENST00000393454 KRTAP9-6A8MVA2 160 aa2.88□□□□□ -1.95
TDP1-203ENST00000393454 KRTAP20-1Q3LI63 56 aa2.85□□□□□ -1.95
TDP1-203ENST00000393454 SPRR2DP22532 72 aa2.81□□□□□ -1.96
TDP1-203ENST00000393454 KRTAP2-3P0C7H8 128 aa2.78□□□□□ -1.96
TDP1-203ENST00000393454 KRTAP2-4Q9BYR9 128 aa2.78□□□□□ -1.96
TDP1-203ENST00000393454 DSTQ03001 7570 aaKnown RBP2.76□□□□□ -1.97
TDP1-203ENST00000393454 KRTAP2-2Q9BYT5 123 aa2.69□□□□□ -1.98
TDP1-203ENST00000393454 KRTAP2-1Q9BYU5 128 aa2.69□□□□□ -1.98
TDP1-203ENST00000393454 KRTAP5-5Q701N2 237 aaPredicted RBP2.62□□□□□ -1.99
TDP1-203ENST00000393454 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
TDP1-203ENST00000393454 MT1AP04731 61 aa2.6□□□□□ -1.99
TDP1-203ENST00000393454 KRTAP6-1Q3LI64 71 aa2.59□□□□□ -1.99
TDP1-203ENST00000393454 KRTAP5-4Q6L8H1 288 aa2.57□□□□□ -2
TDP1-203ENST00000393454 SYNE1Q8NF91 8797 aaKnown RBP2.52□□□□□ -2.01
TDP1-203ENST00000393454 KRTAP5-11Q6L8G4 156 aa2.48□□□□□ -2.01
TDP1-203ENST00000393454 KRTAP12-4P60329 112 aa2.47□□□□□ -2.01
TDP1-203ENST00000393454 MT4P47944 62 aa2.45□□□□□ -2.02
TDP1-203ENST00000393454 GPR98Q8WXG9 6306 aa2.44□□□□□ -2.02
TDP1-203ENST00000393454 KRTAP5-1Q6L8H4 278 aa2.44□□□□□ -2.02
TDP1-203ENST00000393454 MT3P25713 68 aa2.43□□□□□ -2.02
TDP1-203ENST00000393454 INE1O15225 51 aa2.41□□□□□ -2.02
TDP1-203ENST00000393454 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
TDP1-203ENST00000393454 KRTAP6-2Q3LI66 62 aa2.39□□□□□ -2.03
TDP1-203ENST00000393454 HMCN1Q96RW7 5635 aa2.39□□□□□ -2.03
TDP1-203ENST00000393454 KRTAP20-2Q3LI61 65 aa2.35□□□□□ -2.03
TDP1-203ENST00000393454 LCE3DQ9BYE3 92 aa2.3□□□□□ -2.04
TDP1-203ENST00000393454 AHNAK2Q8IVF2 5795 aa2.3□□□□□ -2.04
TDP1-203ENST00000393454 LCE3EQ5T5B0 92 aa2.28□□□□□ -2.04
TDP1-203ENST00000393454 KRTAP5-10Q6L8G5 202 aa2.26□□□□□ -2.05
TDP1-203ENST00000393454 KRTAP5-2Q701N4 177 aa2.26□□□□□ -2.05
TDP1-203ENST00000393454 KRTAP5-7Q6L8G8 165 aa2.17□□□□□ -2.06
TDP1-203ENST00000393454 OBSCNQ5VST9 7968 aa2.13□□□□□ -2.07
TDP1-203ENST00000393454 LCE1EQ5T753 118 aa2.12□□□□□ -2.07
TDP1-203ENST00000393454 KRTAP5-8O75690 187 aa2.08□□□□□ -2.08
TDP1-203ENST00000393454 PRM1P04553 51 aa1.98□□□□□ -2.09
TDP1-203ENST00000393454 LCE1BQ5T7P3 118 aa1.96□□□□□ -2.1
TDP1-203ENST00000393454 MUC5BQ9HC84 5762 aaPredicted RBP1.92□□□□□ -2.1
TDP1-203ENST00000393454 AHNAKQ09666 5890 aaKnown RBP1.89□□□□□ -2.11
TDP1-203ENST00000393454 MUC5ACP98088 5654 aa1.89□□□□□ -2.11
TDP1-203ENST00000393454 LCE1CQ5T751 118 aa1.89□□□□□ -2.11
TDP1-203ENST00000393454 KRTAP21-2Q3LI59 83 aa1.68□□□□□ -2.14
TDP1-203ENST00000393454 PHGR1C9JFL3 82 aa1.43□□□□□ -2.18
TDP1-203ENST00000393454 MUC19Q7Z5P9 8384 aa1.29□□□□□ -2.2
TDP1-203ENST00000393454 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
TDP1-203ENST00000393454 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 145.5 ms