RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 LCE3CQ5T5A8 94 aa3.27□□□□□ -1.89
TDP1-202ENST00000393452 KRTAP20-1Q3LI63 56 aa3.27□□□□□ -1.89
TDP1-202ENST00000393452 INE1O15225 51 aa3.26□□□□□ -1.89
TDP1-202ENST00000393452 KRTAP19-4Q3LI73 84 aa3.22□□□□□ -1.89
TDP1-202ENST00000393452 MACF1Q9UPN3 7388 aaKnown RBP3.22□□□□□ -1.89
TDP1-202ENST00000393452 MT1EP04732 61 aa3.21□□□□□ -1.9
TDP1-202ENST00000393452 SYNE2Q8WXH0 6885 aaKnown RBP3.2□□□□□ -1.9
TDP1-202ENST00000393452 MT1LQ93083 61 aa3.19□□□□□ -1.9
TDP1-202ENST00000393452 NEBP20929 6669 aa3.18□□□□□ -1.9
TDP1-202ENST00000393452 KRTAP9-6A8MVA2 160 aa3.14□□□□□ -1.91
TDP1-202ENST00000393452 KRTAP2-3P0C7H8 128 aa3.13□□□□□ -1.91
TDP1-202ENST00000393452 KRTAP4-7Q9BYR0 210 aa3.13□□□□□ -1.91
TDP1-202ENST00000393452 KRTAP2-4Q9BYR9 128 aa3.13□□□□□ -1.91
TDP1-202ENST00000393452 KRTAP5-9P26371 169 aa3.09□□□□□ -1.91
TDP1-202ENST00000393452 KRTAP9-4Q9BYQ2 154 aa3.04□□□□□ -1.92
TDP1-202ENST00000393452 KRTAP19-3Q7Z4W3 81 aa3.04□□□□□ -1.92
TDP1-202ENST00000393452 LCE5AQ5TCM9 118 aa3.03□□□□□ -1.92
TDP1-202ENST00000393452 MT1GP13640 62 aa3.02□□□□□ -1.93
TDP1-202ENST00000393452 MUC12Q9UKN1 5478 aa3.02□□□□□ -1.93
TDP1-202ENST00000393452 MT1MQ8N339 61 aa3.01□□□□□ -1.93
TDP1-202ENST00000393452 KRTAP2-2Q9BYT5 123 aa3.01□□□□□ -1.93
TDP1-202ENST00000393452 KRTAP2-1Q9BYU5 128 aa3.01□□□□□ -1.93
TDP1-202ENST00000393452 KRTAP9-9Q9BYP9 154 aa2.99□□□□□ -1.93
TDP1-202ENST00000393452 KRTAP4-3Q9BYR4 195 aa2.98□□□□□ -1.93
TDP1-202ENST00000393452 SPRR2FQ96RM1 72 aa2.97□□□□□ -1.93
TDP1-202ENST00000393452 KRTAP5-3Q6L8H2 238 aa2.97□□□□□ -1.93
TDP1-202ENST00000393452 MDN1Q9NU22 5596 aa2.96□□□□□ -1.94
TDP1-202ENST00000393452 LCE3BQ5TA77 95 aa2.94□□□□□ -1.94
TDP1-202ENST00000393452 LCE4AQ5TA78 99 aa2.93□□□□□ -1.94
TDP1-202ENST00000393452 SPRR2EP22531 72 aa2.88□□□□□ -1.95
TDP1-202ENST00000393452 SPRR2BP35325 72 aa2.88□□□□□ -1.95
TDP1-202ENST00000393452 SPRR2AP35326 72 aa2.88□□□□□ -1.95
TDP1-202ENST00000393452 LCE1AQ5T7P2 110 aa2.83□□□□□ -1.96
TDP1-202ENST00000393452 GPR98Q8WXG9 6306 aa2.82□□□□□ -1.96
TDP1-202ENST00000393452 SPRR2DP22532 72 aa2.81□□□□□ -1.96
TDP1-202ENST00000393452 KRTAP4-2Q9BYR5 136 aa2.81□□□□□ -1.96
TDP1-202ENST00000393452 KRTAP4-9Q9BYQ8 210 aa2.8□□□□□ -1.96
TDP1-202ENST00000393452 DSTQ03001 7570 aaKnown RBP2.79□□□□□ -1.96
TDP1-202ENST00000393452 LCE1DQ5T752 114 aa2.79□□□□□ -1.96
TDP1-202ENST00000393452 KRTAP4-12Q9BQ66 201 aa2.76□□□□□ -1.97
TDP1-202ENST00000393452 KRTAP5-5Q701N2 237 aaPredicted RBP2.71□□□□□ -1.98
TDP1-202ENST00000393452 MT1AP04731 61 aa2.69□□□□□ -1.98
TDP1-202ENST00000393452 KRTAP6-1Q3LI64 71 aa2.68□□□□□ -1.98
TDP1-202ENST00000393452 LCE1FQ5T754 118 aa2.66□□□□□ -1.98
TDP1-202ENST00000393452 KRTAP5-7Q6L8G8 165 aa2.58□□□□□ -2
TDP1-202ENST00000393452 KRTAP12-4P60329 112 aa2.57□□□□□ -2
TDP1-202ENST00000393452 KRTAP5-10Q6L8G5 202 aa2.57□□□□□ -2
TDP1-202ENST00000393452 KRTAP4-11Q9BYQ6 195 aa2.57□□□□□ -2
TDP1-202ENST00000393452 SYNE1Q8NF91 8797 aaKnown RBP2.56□□□□□ -2
TDP1-202ENST00000393452 LCE3DQ9BYE3 92 aa2.49□□□□□ -2.01
TDP1-202ENST00000393452 AHNAK2Q8IVF2 5795 aa2.48□□□□□ -2.01
TDP1-202ENST00000393452 KRTAP5-4Q6L8H1 288 aa2.47□□□□□ -2.01
TDP1-202ENST00000393452 HMCN1Q96RW7 5635 aa2.46□□□□□ -2.02
TDP1-202ENST00000393452 MT4P47944 62 aa2.45□□□□□ -2.02
TDP1-202ENST00000393452 LCE3EQ5T5B0 92 aa2.45□□□□□ -2.02
TDP1-202ENST00000393452 KRTAP6-2Q3LI66 62 aa2.43□□□□□ -2.02
TDP1-202ENST00000393452 MT3P25713 68 aa2.42□□□□□ -2.02
TDP1-202ENST00000393452 LCE1EQ5T753 118 aa2.38□□□□□ -2.03
TDP1-202ENST00000393452 KRTAP20-2Q3LI61 65 aa2.29□□□□□ -2.04
TDP1-202ENST00000393452 KRTAP5-2Q701N4 177 aa2.28□□□□□ -2.04
TDP1-202ENST00000393452 OBSCNQ5VST9 7968 aa2.27□□□□□ -2.05
TDP1-202ENST00000393452 PRM1P04553 51 aa2.27□□□□□ -2.05
TDP1-202ENST00000393452 AHNAKQ09666 5890 aaKnown RBP2.26□□□□□ -2.05
TDP1-202ENST00000393452 MUC5BQ9HC84 5762 aaPredicted RBP2.22□□□□□ -2.05
TDP1-202ENST00000393452 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.15□□□□□ -2.06
TDP1-202ENST00000393452 MUC5ACP98088 5654 aa2.12□□□□□ -2.07
TDP1-202ENST00000393452 KRTAP5-8O75690 187 aa2.07□□□□□ -2.08
TDP1-202ENST00000393452 KRTAP5-1Q6L8H4 278 aa1.94□□□□□ -2.1
TDP1-202ENST00000393452 LCE1CQ5T751 118 aa1.93□□□□□ -2.1
TDP1-202ENST00000393452 LCE1BQ5T7P3 118 aa1.93□□□□□ -2.1
TDP1-202ENST00000393452 KRTAP21-2Q3LI59 83 aa1.76□□□□□ -2.13
TDP1-202ENST00000393452 KRTAP5-11Q6L8G4 156 aa1.68□□□□□ -2.14
TDP1-202ENST00000393452 KRTAP4-4Q9BYR3 166 aa1.68□□□□□ -2.14
TDP1-202ENST00000393452 MUC19Q7Z5P9 8384 aa1.55□□□□□ -2.16
TDP1-202ENST00000393452 PHGR1C9JFL3 82 aa1.48□□□□□ -2.17
TDP1-202ENST00000393452 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
TDP1-202ENST00000393452 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 80.5 ms