RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 KRTAP4-12Q9BQ66 201 aa4.75□□□□□ -1.65
SEC13-203ENST00000383801 KRTAP9-7A8MTY7 169 aa4.74□□□□□ -1.65
SEC13-203ENST00000383801 MT1GP13640 62 aa4.71□□□□□ -1.66
SEC13-203ENST00000383801 MACF1Q9UPN3 7388 aaKnown RBP4.7□□□□□ -1.66
SEC13-203ENST00000383801 KRTAP19-3Q7Z4W3 81 aa4.69□□□□□ -1.66
SEC13-203ENST00000383801 LCE3BQ5TA77 95 aa4.69□□□□□ -1.66
SEC13-203ENST00000383801 SPRR2FQ96RM1 72 aa4.66□□□□□ -1.66
SEC13-203ENST00000383801 KRTAP5-9P26371 169 aa4.64□□□□□ -1.67
SEC13-203ENST00000383801 KRTAP9-9Q9BYP9 154 aa4.61□□□□□ -1.67
SEC13-203ENST00000383801 KRTAP9-4Q9BYQ2 154 aa4.61□□□□□ -1.67
SEC13-203ENST00000383801 LCE5AQ5TCM9 118 aa4.6□□□□□ -1.67
SEC13-203ENST00000383801 MT1MQ8N339 61 aa4.58□□□□□ -1.68
SEC13-203ENST00000383801 KRTAP4-7Q9BYR0 210 aa4.56□□□□□ -1.68
SEC13-203ENST00000383801 MUC12Q9UKN1 5478 aa4.55□□□□□ -1.68
SEC13-203ENST00000383801 SYNE2Q8WXH0 6885 aaKnown RBP4.54□□□□□ -1.68
SEC13-203ENST00000383801 KRTAP9-6A8MVA2 160 aa4.51□□□□□ -1.69
SEC13-203ENST00000383801 KRTAP6-3Q3LI67 103 aa4.49□□□□□ -1.69
SEC13-203ENST00000383801 H3BS24 57 aa4.48□□□□□ -1.69
SEC13-203ENST00000383801 LCE1AQ5T7P2 110 aa4.46□□□□□ -1.7
SEC13-203ENST00000383801 A0A0A0MQY5 61 aa4.42□□□□□ -1.7
SEC13-203ENST00000383801 LCE1DQ5T752 114 aa4.39□□□□□ -1.71
SEC13-203ENST00000383801 KRTAP4-3Q9BYR4 195 aa4.39□□□□□ -1.71
SEC13-203ENST00000383801 SPRR2EP22531 72 aa4.38□□□□□ -1.71
SEC13-203ENST00000383801 SPRR2BP35325 72 aa4.38□□□□□ -1.71
SEC13-203ENST00000383801 SPRR2AP35326 72 aa4.38□□□□□ -1.71
SEC13-203ENST00000383801 MDN1Q9NU22 5596 aa4.38□□□□□ -1.71
SEC13-203ENST00000383801 KRTAP2-3P0C7H8 128 aa4.33□□□□□ -1.72
SEC13-203ENST00000383801 KRTAP2-4Q9BYR9 128 aa4.33□□□□□ -1.72
SEC13-203ENST00000383801 KRTAP2-1Q9BYU5 128 aa4.33□□□□□ -1.72
SEC13-203ENST00000383801 LCE4AQ5TA78 99 aa4.31□□□□□ -1.72
SEC13-203ENST00000383801 KRTAP4-9Q9BYQ8 210 aa4.27□□□□□ -1.73
SEC13-203ENST00000383801 SPRR2DP22532 72 aa4.23□□□□□ -1.73
SEC13-203ENST00000383801 NEBP20929 6669 aa4.21□□□□□ -1.73
SEC13-203ENST00000383801 DSTQ03001 7570 aaKnown RBP4.18□□□□□ -1.74
SEC13-203ENST00000383801 KRTAP4-2Q9BYR5 136 aa4.18□□□□□ -1.74
SEC13-203ENST00000383801 INE1O15225 51 aa4.16□□□□□ -1.74
SEC13-203ENST00000383801 KRTAP5-5Q701N2 237 aaPredicted RBP4.15□□□□□ -1.75
SEC13-203ENST00000383801 KRTAP20-1Q3LI63 56 aa4.12□□□□□ -1.75
SEC13-203ENST00000383801 KRTAP4-11Q9BYQ6 195 aa4.12□□□□□ -1.75
SEC13-203ENST00000383801 MT1AP04731 61 aa4.11□□□□□ -1.75
SEC13-203ENST00000383801 KRTAP6-1Q3LI64 71 aa4.01□□□□□ -1.77
SEC13-203ENST00000383801 KRTAP5-4Q6L8H1 288 aa3.92□□□□□ -1.78
SEC13-203ENST00000383801 KRTAP12-4P60329 112 aa3.86□□□□□ -1.79
SEC13-203ENST00000383801 KRTAP2-2Q9BYT5 123 aa3.84□□□□□ -1.8
SEC13-203ENST00000383801 SYNE1Q8NF91 8797 aaKnown RBP3.84□□□□□ -1.8
SEC13-203ENST00000383801 MT3P25713 68 aa3.75□□□□□ -1.81
SEC13-203ENST00000383801 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
SEC13-203ENST00000383801 GPR98Q8WXG9 6306 aa3.68□□□□□ -1.82
SEC13-203ENST00000383801 KRTAP6-2Q3LI66 62 aa3.67□□□□□ -1.82
SEC13-203ENST00000383801 KRTAP5-3Q6L8H2 238 aa3.67□□□□□ -1.82
SEC13-203ENST00000383801 KRTAP20-2Q3LI61 65 aa3.61□□□□□ -1.83
SEC13-203ENST00000383801 LCE3EQ5T5B0 92 aa3.61□□□□□ -1.83
SEC13-203ENST00000383801 MT4P47944 62 aa3.6□□□□□ -1.83
SEC13-203ENST00000383801 KRTAP5-2Q701N4 177 aa3.57□□□□□ -1.84
SEC13-203ENST00000383801 HMCN1Q96RW7 5635 aa3.54□□□□□ -1.84
SEC13-203ENST00000383801 OBSCNQ5VST9 7968 aa3.3□□□□□ -1.88
SEC13-203ENST00000383801 LCE1EQ5T753 118 aa3.28□□□□□ -1.88
SEC13-203ENST00000383801 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
SEC13-203ENST00000383801 KRTAP5-10Q6L8G5 202 aa3.22□□□□□ -1.89
SEC13-203ENST00000383801 KRTAP5-7Q6L8G8 165 aa3.16□□□□□ -1.9
SEC13-203ENST00000383801 PRM1P04553 51 aa3.15□□□□□ -1.91
SEC13-203ENST00000383801 KRTAP5-1Q6L8H4 278 aa3.05□□□□□ -1.92
SEC13-203ENST00000383801 LCE1CQ5T751 118 aa3.03□□□□□ -1.93
SEC13-203ENST00000383801 LCE1BQ5T7P3 118 aa3.03□□□□□ -1.93
SEC13-203ENST00000383801 KRTAP5-8O75690 187 aa3□□□□□ -1.93
SEC13-203ENST00000383801 MUC5ACP98088 5654 aa2.92□□□□□ -1.94
SEC13-203ENST00000383801 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.87□□□□□ -1.95
SEC13-203ENST00000383801 AHNAKQ09666 5890 aaKnown RBP2.79□□□□□ -1.96
SEC13-203ENST00000383801 KRTAP5-11Q6L8G4 156 aa2.79□□□□□ -1.96
SEC13-203ENST00000383801 MUC5BQ9HC84 5762 aaPredicted RBP2.71□□□□□ -1.98
SEC13-203ENST00000383801 KRTAP21-2Q3LI59 83 aa2.65□□□□□ -1.98
SEC13-203ENST00000383801 LCE1FQ5T754 118 aa2.42□□□□□ -2.02
SEC13-203ENST00000383801 KRTAP4-4Q9BYR3 166 aa2.32□□□□□ -2.04
SEC13-203ENST00000383801 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
SEC13-203ENST00000383801 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
SEC13-203ENST00000383801 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.11
SEC13-203ENST00000383801 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 63.5 ms