RNA–Protein interactions for RNA: ENST00000382110.6

TRAPPC12-202, Transcript of trafficking protein particle complex 12, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAPPC12, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-202ENST00000382110 KRTAP19-4Q3LI73 84 aa6.54□□□□□ -1.36
TRAPPC12-202ENST00000382110 MUC12Q9UKN1 5478 aa6.5□□□□□ -1.37
TRAPPC12-202ENST00000382110 KRTAP4-3Q9BYR4 195 aa6.46□□□□□ -1.38
TRAPPC12-202ENST00000382110 LOC100996750A0A140TA64 210 aa6.43□□□□□ -1.38
TRAPPC12-202ENST00000382110 LCE2DQ5TA82 110 aaPredicted RBP6.42□□□□□ -1.38
TRAPPC12-202ENST00000382110 MT1GP13640 62 aa6.34□□□□□ -1.4
TRAPPC12-202ENST00000382110 MT1MQ8N339 61 aa6.29□□□□□ -1.4
TRAPPC12-202ENST00000382110 KRTAP19-3Q7Z4W3 81 aa6.28□□□□□ -1.4
TRAPPC12-202ENST00000382110 DSTQ03001 7570 aaKnown RBP6.24□□□□□ -1.41
TRAPPC12-202ENST00000382110 CRCT1Q9UGL9 99 aa6.22□□□□□ -1.41
TRAPPC12-202ENST00000382110 SPRR2FQ96RM1 72 aa6.08□□□□□ -1.44
TRAPPC12-202ENST00000382110 MACF1Q9UPN3 7388 aaKnown RBP6.07□□□□□ -1.44
TRAPPC12-202ENST00000382110 LCE5AQ5TCM9 118 aa6.07□□□□□ -1.44
TRAPPC12-202ENST00000382110 KRTAP9-2Q9BYQ4 174 aa6.02□□□□□ -1.45
TRAPPC12-202ENST00000382110 MDN1Q9NU22 5596 aa5.91□□□□□ -1.46
TRAPPC12-202ENST00000382110 SYNE2Q8WXH0 6885 aaKnown RBP5.91□□□□□ -1.46
TRAPPC12-202ENST00000382110 KRTAP12-4P60329 112 aa5.87□□□□□ -1.47
TRAPPC12-202ENST00000382110 LCE3BQ5TA77 95 aa5.85□□□□□ -1.47
TRAPPC12-202ENST00000382110 KRTAP4-9Q9BYQ8 210 aa5.79□□□□□ -1.48
TRAPPC12-202ENST00000382110 SYNE1Q8NF91 8797 aaKnown RBP5.77□□□□□ -1.49
TRAPPC12-202ENST00000382110 KRTAP6-1Q3LI64 71 aa5.75□□□□□ -1.49
TRAPPC12-202ENST00000382110 LCE1AQ5T7P2 110 aa5.66□□□□□ -1.5
TRAPPC12-202ENST00000382110 KRTAP9-6A0A140TA67 174 aa5.66□□□□□ -1.5
TRAPPC12-202ENST00000382110 MT1AP04731 61 aa5.62□□□□□ -1.51
TRAPPC12-202ENST00000382110 KRTAP5-9P26371 169 aa5.58□□□□□ -1.52
TRAPPC12-202ENST00000382110 KRTAP5-5Q701N2 237 aaPredicted RBP5.56□□□□□ -1.52
TRAPPC12-202ENST00000382110 SPRR2EP22531 72 aa5.5□□□□□ -1.53
TRAPPC12-202ENST00000382110 SPRR2BP35325 72 aa5.5□□□□□ -1.53
TRAPPC12-202ENST00000382110 SPRR2AP35326 72 aa5.5□□□□□ -1.53
TRAPPC12-202ENST00000382110 LCE3DQ9BYE3 92 aa5.48□□□□□ -1.53
TRAPPC12-202ENST00000382110 KRTAP2-2Q9BYT5 123 aa5.46□□□□□ -1.54
TRAPPC12-202ENST00000382110 KRTAP6-3Q3LI67 103 aa5.39□□□□□ -1.55
TRAPPC12-202ENST00000382110 LCE3EQ5T5B0 92 aa5.39□□□□□ -1.55
TRAPPC12-202ENST00000382110 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.33□□□□□ -1.56
TRAPPC12-202ENST00000382110 KRTAP9-7A8MTY7 169 aa5.32□□□□□ -1.56
TRAPPC12-202ENST00000382110 KRTAP9-4Q9BYQ2 154 aa5.3□□□□□ -1.56
TRAPPC12-202ENST00000382110 OBSCNQ5VST9 7968 aa5.27□□□□□ -1.57
TRAPPC12-202ENST00000382110 SPRR2DP22532 72 aa5.25□□□□□ -1.57
TRAPPC12-202ENST00000382110 PRM1P04553 51 aa5.23□□□□□ -1.57
TRAPPC12-202ENST00000382110 KRTAP6-2Q3LI66 62 aa5.15□□□□□ -1.59
TRAPPC12-202ENST00000382110 MT3P25713 68 aa5.04□□□□□ -1.6
TRAPPC12-202ENST00000382110 LCE1EQ5T753 118 aa4.89□□□□□ -1.63
TRAPPC12-202ENST00000382110 KRTAP5-4Q6L8H1 288 aa4.85□□□□□ -1.63
TRAPPC12-202ENST00000382110 NEBP20929 6669 aa4.84□□□□□ -1.63
TRAPPC12-202ENST00000382110 KRTAP4-6Q9BYQ5 205 aa4.76□□□□□ -1.65
TRAPPC12-202ENST00000382110 LCE1DQ5T752 114 aa4.72□□□□□ -1.65
TRAPPC12-202ENST00000382110 MT4P47944 62 aa4.69□□□□□ -1.66
TRAPPC12-202ENST00000382110 KRTAP20-2Q3LI61 65 aa4.58□□□□□ -1.68
TRAPPC12-202ENST00000382110 HMCN1Q96RW7 5635 aa4.54□□□□□ -1.68
TRAPPC12-202ENST00000382110 KRTAP5-2Q701N4 177 aa4.54□□□□□ -1.68
TRAPPC12-202ENST00000382110 KRTAP20-1Q3LI63 56 aa4.52□□□□□ -1.69
TRAPPC12-202ENST00000382110 LCE4AQ5TA78 99 aa4.48□□□□□ -1.69
TRAPPC12-202ENST00000382110 MUC5ACP98088 5654 aa4.36□□□□□ -1.71
TRAPPC12-202ENST00000382110 KRTAP5-3Q6L8H2 238 aa4.36□□□□□ -1.71
TRAPPC12-202ENST00000382110 LCE1FQ5T754 118 aa4.21□□□□□ -1.73
TRAPPC12-202ENST00000382110 LCE1BQ5T7P3 118 aa4.13□□□□□ -1.75
TRAPPC12-202ENST00000382110 KRTAP5-10Q6L8G5 202 aa4.02□□□□□ -1.77
TRAPPC12-202ENST00000382110 KRTAP5-1Q6L8H4 278 aa3.96□□□□□ -1.78
TRAPPC12-202ENST00000382110 KRTAP4-11Q9BYQ6 195 aa3.95□□□□□ -1.78
TRAPPC12-202ENST00000382110 KRTAP4-2Q9BYR5 136 aa3.95□□□□□ -1.78
TRAPPC12-202ENST00000382110 LCE1CQ5T751 118 aa3.88□□□□□ -1.79
TRAPPC12-202ENST00000382110 AHNAK2Q8IVF2 5795 aa3.72□□□□□ -1.81
TRAPPC12-202ENST00000382110 KRTAP21-2Q3LI59 83 aa3.7□□□□□ -1.82
TRAPPC12-202ENST00000382110 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.65□□□□□ -1.82
TRAPPC12-202ENST00000382110 KRTAP5-8O75690 187 aa3.62□□□□□ -1.83
TRAPPC12-202ENST00000382110 GPR98Q8WXG9 6306 aa3.6□□□□□ -1.83
TRAPPC12-202ENST00000382110 KRTAP5-7Q6L8G8 165 aa3.51□□□□□ -1.85
TRAPPC12-202ENST00000382110 KRTAP21-1Q3LI58 79 aa3.45□□□□□ -1.86
TRAPPC12-202ENST00000382110 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
TRAPPC12-202ENST00000382110 MUC5BQ9HC84 5762 aaPredicted RBP3.39□□□□□ -1.87
TRAPPC12-202ENST00000382110 KRTAP5-11Q6L8G4 156 aa3.33□□□□□ -1.88
TRAPPC12-202ENST00000382110 MUC19Q7Z5P9 8384 aa3.3□□□□□ -1.88
TRAPPC12-202ENST00000382110 KRTAP4-12Q9BQ66 201 aa3.24□□□□□ -1.89
TRAPPC12-202ENST00000382110 KRTAP9-9Q9BYP9 154 aa3.03□□□□□ -1.92
TRAPPC12-202ENST00000382110 PHGR1C9JFL3 82 aa2.9□□□□□ -1.95
TRAPPC12-202ENST00000382110 AHNAKQ09666 5890 aaKnown RBP2.89□□□□□ -1.95
TRAPPC12-202ENST00000382110 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 21.5 ms