RNA–Protein interactions for RNA: ENST00000381323.7

FAM49A-201, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49A, Length 4,670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-201ENST00000381323 KRTAP2-3P0C7H8 128 aa3.19□□□□□ -1.9
FAM49A-201ENST00000381323 KRTAP2-4Q9BYR9 128 aa3.19□□□□□ -1.9
FAM49A-201ENST00000381323 KRTAP5-9P26371 169 aa3.14□□□□□ -1.91
FAM49A-201ENST00000381323 KMT2DO14686 5537 aa3.13□□□□□ -1.91
FAM49A-201ENST00000381323 MUC12Q9UKN1 5478 aa3.11□□□□□ -1.91
FAM49A-201ENST00000381323 KRTAP4-8A0A0G2JLE6 195 aa3.11□□□□□ -1.91
FAM49A-201ENST00000381323 KRTAP10-12P60413 245 aa3.09□□□□□ -1.92
FAM49A-201ENST00000381323 KRTAP10-7P60409 375 aaPredicted RBP3.08□□□□□ -1.92
FAM49A-201ENST00000381323 KRTAP15-1Q3LI76 137 aa3.08□□□□□ -1.92
FAM49A-201ENST00000381323 KRTAP9-9Q9BYP9 154 aa3.08□□□□□ -1.92
FAM49A-201ENST00000381323 KRTAP9-4Q9BYQ2 154 aa3.08□□□□□ -1.92
FAM49A-201ENST00000381323 KRTAP2-2Q9BYT5 123 aa3.08□□□□□ -1.92
FAM49A-201ENST00000381323 KRTAP2-1Q9BYU5 128 aa3.08□□□□□ -1.92
FAM49A-201ENST00000381323 MDN1Q9NU22 5596 aa3.05□□□□□ -1.92
FAM49A-201ENST00000381323 LCE1AQ5T7P2 110 aa3.04□□□□□ -1.92
FAM49A-201ENST00000381323 LCE3BQ5TA77 95 aa3.04□□□□□ -1.92
FAM49A-201ENST00000381323 INE1O15225 51 aa3.03□□□□□ -1.92
FAM49A-201ENST00000381323 KRTAP12-3P60328 96 aa2.96□□□□□ -1.94
FAM49A-201ENST00000381323 KRTAP19-4Q3LI73 84 aa2.96□□□□□ -1.94
FAM49A-201ENST00000381323 KRTAP19-3Q7Z4W3 81 aa2.9□□□□□ -1.95
FAM49A-201ENST00000381323 KRTAP19-5Q3LI72 72 aa2.89□□□□□ -1.95
FAM49A-201ENST00000381323 LCE3AQ5TA76 89 aa2.88□□□□□ -1.95
FAM49A-201ENST00000381323 KRTAP4-7Q9BYR0 210 aa2.87□□□□□ -1.95
FAM49A-201ENST00000381323 MT1GP13640 62 aa2.86□□□□□ -1.95
FAM49A-201ENST00000381323 MT1EP04732 61 aa2.86□□□□□ -1.95
FAM49A-201ENST00000381323 DSTQ03001 7570 aaKnown RBP2.86□□□□□ -1.95
FAM49A-201ENST00000381323 KRTAP4-9Q9BYQ8 210 aa2.85□□□□□ -1.95
FAM49A-201ENST00000381323 KRTAP4-2Q9BYR5 136 aa2.83□□□□□ -1.96
FAM49A-201ENST00000381323 GPR98Q8WXG9 6306 aa2.82□□□□□ -1.96
FAM49A-201ENST00000381323 KRTAP19-7Q3SYF9 63 aa2.81□□□□□ -1.96
FAM49A-201ENST00000381323 MT4P47944 62 aa2.8□□□□□ -1.96
FAM49A-201ENST00000381323 LCE5AQ5TCM9 118 aa2.8□□□□□ -1.96
FAM49A-201ENST00000381323 LCE4AQ5TA78 99 aa2.78□□□□□ -1.96
FAM49A-201ENST00000381323 LCE1DQ5T752 114 aa2.76□□□□□ -1.97
FAM49A-201ENST00000381323 MT1MQ8N339 61 aa2.75□□□□□ -1.97
FAM49A-201ENST00000381323 MT1LQ93083 61 aa2.74□□□□□ -1.97
FAM49A-201ENST00000381323 KRTAP4-11Q9BYQ6 195 aa2.71□□□□□ -1.98
FAM49A-201ENST00000381323 KRTAP12-4P60329 112 aa2.67□□□□□ -1.98
FAM49A-201ENST00000381323 KRTAP4-3Q9BYR4 195 aa2.66□□□□□ -1.98
FAM49A-201ENST00000381323 LCE3CQ5T5A8 94 aa2.63□□□□□ -1.99
FAM49A-201ENST00000381323 SPRR5A0A1B0GTR4 108 aa2.59□□□□□ -2
FAM49A-201ENST00000381323 HMCN1Q96RW7 5635 aa2.51□□□□□ -2.01
FAM49A-201ENST00000381323 SYNE1Q8NF91 8797 aaKnown RBP2.5□□□□□ -2.01
FAM49A-201ENST00000381323 KRTAP5-4Q6L8H1 288 aa2.47□□□□□ -2.01
FAM49A-201ENST00000381323 KRTAP20-2Q3LI61 65 aa2.45□□□□□ -2.02
FAM49A-201ENST00000381323 AHNAK2Q8IVF2 5795 aa2.45□□□□□ -2.02
FAM49A-201ENST00000381323 KRTAP5-3Q6L8H2 238 aa2.44□□□□□ -2.02
FAM49A-201ENST00000381323 KRTAP5-10Q6L8G5 202 aa2.38□□□□□ -2.03
FAM49A-201ENST00000381323 MT1AP04731 61 aa2.37□□□□□ -2.03
FAM49A-201ENST00000381323 OBSCNQ5VST9 7968 aa2.34□□□□□ -2.04
FAM49A-201ENST00000381323 KRTAP5-5Q701N2 237 aaPredicted RBP2.32□□□□□ -2.04
FAM49A-201ENST00000381323 KRTAP5-7Q6L8G8 165 aa2.32□□□□□ -2.04
FAM49A-201ENST00000381323 KRTAP6-1Q3LI64 71 aa2.31□□□□□ -2.04
FAM49A-201ENST00000381323 MT3P25713 68 aa2.27□□□□□ -2.05
FAM49A-201ENST00000381323 KRTAP6-2Q3LI66 62 aa2.27□□□□□ -2.05
FAM49A-201ENST00000381323 LCE3DQ9BYE3 92 aa2.24□□□□□ -2.05
FAM49A-201ENST00000381323 LCE3EQ5T5B0 92 aa2.24□□□□□ -2.05
FAM49A-201ENST00000381323 KRTAP9-6A8MVA2 160 aa2.17□□□□□ -2.06
FAM49A-201ENST00000381323 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
FAM49A-201ENST00000381323 KRTAP5-2Q701N4 177 aa2.13□□□□□ -2.07
FAM49A-201ENST00000381323 AHNAKQ09666 5890 aaKnown RBP2.13□□□□□ -2.07
FAM49A-201ENST00000381323 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.09□□□□□ -2.08
FAM49A-201ENST00000381323 LCE1BQ5T7P3 118 aa2.07□□□□□ -2.08
FAM49A-201ENST00000381323 MUC5BQ9HC84 5762 aaPredicted RBP2.04□□□□□ -2.08
FAM49A-201ENST00000381323 MUC5ACP98088 5654 aa2□□□□□ -2.09
FAM49A-201ENST00000381323 LCE1EQ5T753 118 aa1.94□□□□□ -2.1
FAM49A-201ENST00000381323 PRM1P04553 51 aa1.94□□□□□ -2.1
FAM49A-201ENST00000381323 KRTAP5-11Q6L8G4 156 aa1.93□□□□□ -2.1
FAM49A-201ENST00000381323 KRTAP5-1Q6L8H4 278 aa1.93□□□□□ -2.1
FAM49A-201ENST00000381323 LCE1CQ5T751 118 aa1.77□□□□□ -2.13
FAM49A-201ENST00000381323 LCE1FQ5T754 118 aa1.71□□□□□ -2.14
FAM49A-201ENST00000381323 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
FAM49A-201ENST00000381323 KRTAP4-4Q9BYR3 166 aa1.57□□□□□ -2.16
FAM49A-201ENST00000381323 MUC19Q7Z5P9 8384 aa1.53□□□□□ -2.16
FAM49A-201ENST00000381323 KRTAP21-2Q3LI59 83 aa1.43□□□□□ -2.18
FAM49A-201ENST00000381323 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
FAM49A-201ENST00000381323 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 398.5 ms