RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 KRTAP2-4Q9BYR9 128 aa6.72□□□□□ -1.33
EBF1-202ENST00000380654 KRTAP2-1Q9BYU5 128 aa6.72□□□□□ -1.33
EBF1-202ENST00000380654 LCE2DQ5TA82 110 aaPredicted RBP6.71□□□□□ -1.34
EBF1-202ENST00000380654 KRTAP4-3Q9BYR4 195 aa6.69□□□□□ -1.34
EBF1-202ENST00000380654 LOC100996750A0A140TA64 210 aa6.63□□□□□ -1.35
EBF1-202ENST00000380654 KRTAP19-3Q7Z4W3 81 aa6.56□□□□□ -1.36
EBF1-202ENST00000380654 MT1MQ8N339 61 aa6.55□□□□□ -1.36
EBF1-202ENST00000380654 MT1GP13640 62 aa6.55□□□□□ -1.36
EBF1-202ENST00000380654 DSTQ03001 7570 aaKnown RBP6.44□□□□□ -1.38
EBF1-202ENST00000380654 CRCT1Q9UGL9 99 aa6.43□□□□□ -1.38
EBF1-202ENST00000380654 SPRR2FQ96RM1 72 aa6.42□□□□□ -1.38
EBF1-202ENST00000380654 MACF1Q9UPN3 7388 aaKnown RBP6.41□□□□□ -1.38
EBF1-202ENST00000380654 LCE5AQ5TCM9 118 aa6.36□□□□□ -1.39
EBF1-202ENST00000380654 SYNE2Q8WXH0 6885 aaKnown RBP6.2□□□□□ -1.42
EBF1-202ENST00000380654 MDN1Q9NU22 5596 aa6.19□□□□□ -1.42
EBF1-202ENST00000380654 KRTAP9-2Q9BYQ4 174 aa6.08□□□□□ -1.44
EBF1-202ENST00000380654 LCE3BQ5TA77 95 aa6.03□□□□□ -1.44
EBF1-202ENST00000380654 LCE1AQ5T7P2 110 aa5.99□□□□□ -1.45
EBF1-202ENST00000380654 KRTAP5-9P26371 169 aa5.95□□□□□ -1.46
EBF1-202ENST00000380654 KRTAP6-1Q3LI64 71 aa5.95□□□□□ -1.46
EBF1-202ENST00000380654 KRTAP12-4P60329 112 aa5.94□□□□□ -1.46
EBF1-202ENST00000380654 KRTAP4-9Q9BYQ8 210 aa5.92□□□□□ -1.46
EBF1-202ENST00000380654 SYNE1Q8NF91 8797 aaKnown RBP5.9□□□□□ -1.46
EBF1-202ENST00000380654 SPRR2EP22531 72 aa5.85□□□□□ -1.47
EBF1-202ENST00000380654 SPRR2BP35325 72 aa5.85□□□□□ -1.47
EBF1-202ENST00000380654 SPRR2AP35326 72 aa5.85□□□□□ -1.47
EBF1-202ENST00000380654 MT1AP04731 61 aa5.84□□□□□ -1.47
EBF1-202ENST00000380654 KRTAP5-5Q701N2 237 aaPredicted RBP5.8□□□□□ -1.48
EBF1-202ENST00000380654 LCE3DQ9BYE3 92 aa5.6□□□□□ -1.51
EBF1-202ENST00000380654 SPRR2DP22532 72 aa5.59□□□□□ -1.51
EBF1-202ENST00000380654 KRTAP9-4Q9BYQ2 154 aa5.51□□□□□ -1.53
EBF1-202ENST00000380654 LCE3EQ5T5B0 92 aa5.51□□□□□ -1.53
EBF1-202ENST00000380654 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.48□□□□□ -1.53
EBF1-202ENST00000380654 KRTAP6-3Q3LI67 103 aa5.47□□□□□ -1.53
EBF1-202ENST00000380654 KRTAP9-7A8MTY7 169 aa5.37□□□□□ -1.55
EBF1-202ENST00000380654 KRTAP6-2Q3LI66 62 aa5.35□□□□□ -1.55
EBF1-202ENST00000380654 OBSCNQ5VST9 7968 aa5.35□□□□□ -1.55
EBF1-202ENST00000380654 PRM1P04553 51 aa5.25□□□□□ -1.57
EBF1-202ENST00000380654 MT3P25713 68 aa5.24□□□□□ -1.57
EBF1-202ENST00000380654 KRTAP9-6A0A140TA67 174 aa5.22□□□□□ -1.57
EBF1-202ENST00000380654 KRTAP5-4Q6L8H1 288 aa5.13□□□□□ -1.59
EBF1-202ENST00000380654 NEBP20929 6669 aa5.1□□□□□ -1.59
EBF1-202ENST00000380654 KRTAP4-6Q9BYQ5 205 aa5.03□□□□□ -1.6
EBF1-202ENST00000380654 MT4P47944 62 aa4.97□□□□□ -1.61
EBF1-202ENST00000380654 KRTAP20-2Q3LI61 65 aa4.85□□□□□ -1.63
EBF1-202ENST00000380654 HMCN1Q96RW7 5635 aa4.8□□□□□ -1.64
EBF1-202ENST00000380654 LCE4AQ5TA78 99 aa4.79□□□□□ -1.64
EBF1-202ENST00000380654 KRTAP5-2Q701N4 177 aa4.79□□□□□ -1.64
EBF1-202ENST00000380654 LCE1DQ5T752 114 aa4.68□□□□□ -1.66
EBF1-202ENST00000380654 KRTAP5-3Q6L8H2 238 aa4.62□□□□□ -1.67
EBF1-202ENST00000380654 KRTAP2-2Q9BYT5 123 aa4.59□□□□□ -1.67
EBF1-202ENST00000380654 KRTAP20-1Q3LI63 56 aa4.56□□□□□ -1.68
EBF1-202ENST00000380654 MUC5ACP98088 5654 aa4.5□□□□□ -1.69
EBF1-202ENST00000380654 LCE1BQ5T7P3 118 aa4.3□□□□□ -1.72
EBF1-202ENST00000380654 LCE1EQ5T753 118 aa4.29□□□□□ -1.72
EBF1-202ENST00000380654 KRTAP4-2Q9BYR5 136 aa4.13□□□□□ -1.75
EBF1-202ENST00000380654 KRTAP5-10Q6L8G5 202 aa4.12□□□□□ -1.75
EBF1-202ENST00000380654 KRTAP5-1Q6L8H4 278 aa4.1□□□□□ -1.75
EBF1-202ENST00000380654 LCE1CQ5T751 118 aa4.07□□□□□ -1.76
EBF1-202ENST00000380654 KRTAP4-11Q9BYQ6 195 aa4.03□□□□□ -1.77
EBF1-202ENST00000380654 KRTAP9-9Q9BYP9 154 aa3.99□□□□□ -1.77
EBF1-202ENST00000380654 KRTAP5-8O75690 187 aa3.86□□□□□ -1.79
EBF1-202ENST00000380654 KRTAP4-12Q9BQ66 201 aa3.86□□□□□ -1.79
EBF1-202ENST00000380654 KRTAP21-2Q3LI59 83 aa3.84□□□□□ -1.79
EBF1-202ENST00000380654 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.82□□□□□ -1.8
EBF1-202ENST00000380654 AHNAK2Q8IVF2 5795 aa3.8□□□□□ -1.8
EBF1-202ENST00000380654 KRTAP5-7Q6L8G8 165 aa3.74□□□□□ -1.81
EBF1-202ENST00000380654 KRTAP4-4Q9BYR3 166 aa3.56□□□□□ -1.84
EBF1-202ENST00000380654 MUC5BQ9HC84 5762 aaPredicted RBP3.54□□□□□ -1.84
EBF1-202ENST00000380654 KRTAP5-11Q6L8G4 156 aa3.5□□□□□ -1.85
EBF1-202ENST00000380654 MUC19Q7Z5P9 8384 aa3.33□□□□□ -1.88
EBF1-202ENST00000380654 KRTAP21-1Q3LI58 79 aa3.25□□□□□ -1.89
EBF1-202ENST00000380654 GPR98Q8WXG9 6306 aa3.17□□□□□ -1.9
EBF1-202ENST00000380654 PHGR1C9JFL3 82 aa3.04□□□□□ -1.92
EBF1-202ENST00000380654 LCE1FQ5T754 118 aa2.93□□□□□ -1.94
EBF1-202ENST00000380654 AHNAKQ09666 5890 aaKnown RBP2.69□□□□□ -1.98
EBF1-202ENST00000380654 MUC16Q8WXI7 14507 aa2.03□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 90 ms