RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 LOC100996750A0A140TA64 210 aa3.49□□□□□ -1.85
USP6NL-202ENST00000379237 SPRR2EP22531 72 aa3.48□□□□□ -1.85
USP6NL-202ENST00000379237 SPRR2BP35325 72 aa3.48□□□□□ -1.85
USP6NL-202ENST00000379237 SPRR2AP35326 72 aa3.48□□□□□ -1.85
USP6NL-202ENST00000379237 KRTAP19-7Q3SYF9 63 aa3.45□□□□□ -1.86
USP6NL-202ENST00000379237 PRM1P04553 51 aa3.43□□□□□ -1.86
USP6NL-202ENST00000379237 MT1EP04732 61 aa3.41□□□□□ -1.86
USP6NL-202ENST00000379237 LCE2BO14633 110 aa3.39□□□□□ -1.87
USP6NL-202ENST00000379237 KRTAP4-3Q9BYR4 195 aa3.39□□□□□ -1.87
USP6NL-202ENST00000379237 SSPOA2VEC9 5147 aa3.39□□□□□ -1.87
USP6NL-202ENST00000379237 LCE3DQ9BYE3 92 aa3.39□□□□□ -1.87
USP6NL-202ENST00000379237 LCE2DQ5TA82 110 aaPredicted RBP3.38□□□□□ -1.87
USP6NL-202ENST00000379237 SPRR2DP22532 72 aa3.38□□□□□ -1.87
USP6NL-202ENST00000379237 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
USP6NL-202ENST00000379237 KRTAP4-9Q9BYQ8 210 aa3.37□□□□□ -1.87
USP6NL-202ENST00000379237 OBSCNQ5VST9 7968 aa3.36□□□□□ -1.87
USP6NL-202ENST00000379237 FCGBPQ9Y6R7 5405 aaPredicted RBP3.32□□□□□ -1.88
USP6NL-202ENST00000379237 KRTAP9-7A8MTY7 169 aa3.27□□□□□ -1.89
USP6NL-202ENST00000379237 DSTQ03001 7570 aaKnown RBP3.26□□□□□ -1.89
USP6NL-202ENST00000379237 LCE2AQ5TA79 106 aaPredicted RBP3.22□□□□□ -1.89
USP6NL-202ENST00000379237 KRTAP9-2Q9BYQ4 174 aa3.22□□□□□ -1.89
USP6NL-202ENST00000379237 KRTAP19-3Q7Z4W3 81 aa3.2□□□□□ -1.9
USP6NL-202ENST00000379237 MT1MQ8N339 61 aa3.2□□□□□ -1.9
USP6NL-202ENST00000379237 MUC12Q9UKN1 5478 aa3.19□□□□□ -1.9
USP6NL-202ENST00000379237 KRTAP19-6Q3LI70 58 aa3.12□□□□□ -1.91
USP6NL-202ENST00000379237 LCE1AQ5T7P2 110 aa3.1□□□□□ -1.91
USP6NL-202ENST00000379237 KRTAP9-6A0A140TA67 174 aa3.09□□□□□ -1.92
USP6NL-202ENST00000379237 MT1AP04731 61 aa3.08□□□□□ -1.92
USP6NL-202ENST00000379237 MUC19Q7Z5P9 8384 aa3.08□□□□□ -1.92
USP6NL-202ENST00000379237 KRTAP6-2Q3LI66 62 aa3.07□□□□□ -1.92
USP6NL-202ENST00000379237 MACF1Q9UPN3 7388 aaKnown RBP3.06□□□□□ -1.92
USP6NL-202ENST00000379237 SYNE2Q8WXH0 6885 aaKnown RBP3.05□□□□□ -1.92
USP6NL-202ENST00000379237 MDN1Q9NU22 5596 aa3.05□□□□□ -1.92
USP6NL-202ENST00000379237 KRTAP6-3Q3LI67 103 aa3.04□□□□□ -1.92
USP6NL-202ENST00000379237 MT3P25713 68 aa3.01□□□□□ -1.93
USP6NL-202ENST00000379237 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
USP6NL-202ENST00000379237 MT4P47944 62 aa3.01□□□□□ -1.93
USP6NL-202ENST00000379237 KRTAP6-1Q3LI64 71 aa3.01□□□□□ -1.93
USP6NL-202ENST00000379237 GPR98Q8WXG9 6306 aa3□□□□□ -1.93
USP6NL-202ENST00000379237 KRTAP5-5Q701N2 237 aaPredicted RBP2.97□□□□□ -1.93
USP6NL-202ENST00000379237 LCE1DQ5T752 114 aa2.96□□□□□ -1.93
USP6NL-202ENST00000379237 LCE1EQ5T753 118 aa2.96□□□□□ -1.94
USP6NL-202ENST00000379237 KRTAP2-2Q9BYT5 123 aa2.95□□□□□ -1.94
USP6NL-202ENST00000379237 LCE5AQ5TCM9 118 aa2.85□□□□□ -1.95
USP6NL-202ENST00000379237 KRTAP20-1Q3LI63 56 aa2.77□□□□□ -1.97
USP6NL-202ENST00000379237 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.72□□□□□ -1.97
USP6NL-202ENST00000379237 KRTAP9-4Q9BYQ2 154 aa2.7□□□□□ -1.98
USP6NL-202ENST00000379237 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
USP6NL-202ENST00000379237 LCE1FQ5T754 118 aa2.7□□□□□ -1.98
USP6NL-202ENST00000379237 KRTAP4-11Q9BYQ6 195 aa2.57□□□□□ -2
USP6NL-202ENST00000379237 LCE4AQ5TA78 99 aa2.56□□□□□ -2
USP6NL-202ENST00000379237 NEBP20929 6669 aa2.49□□□□□ -2.01
USP6NL-202ENST00000379237 KRTAP9-9Q9BYP9 154 aa2.41□□□□□ -2.02
USP6NL-202ENST00000379237 KRTAP5-9P26371 169 aa2.4□□□□□ -2.03
USP6NL-202ENST00000379237 KRTAP4-6Q9BYQ5 205 aa2.34□□□□□ -2.03
USP6NL-202ENST00000379237 HMCN1Q96RW7 5635 aa2.26□□□□□ -2.05
USP6NL-202ENST00000379237 KRTAP20-2Q3LI61 65 aa2.23□□□□□ -2.05
USP6NL-202ENST00000379237 MUC5ACP98088 5654 aa2.17□□□□□ -2.06
USP6NL-202ENST00000379237 KRTAP4-12Q9BQ66 201 aa2.12□□□□□ -2.07
USP6NL-202ENST00000379237 KRTAP5-10Q6L8G5 202 aa2.11□□□□□ -2.07
USP6NL-202ENST00000379237 KRTAP5-4Q6L8H1 288 aa2.05□□□□□ -2.08
USP6NL-202ENST00000379237 KRTAP4-4Q9BYR3 166 aa2.03□□□□□ -2.08
USP6NL-202ENST00000379237 KRTAP4-2Q9BYR5 136 aa2.02□□□□□ -2.09
USP6NL-202ENST00000379237 KRTAP5-3Q6L8H2 238 aa2□□□□□ -2.09
USP6NL-202ENST00000379237 AHNAK2Q8IVF2 5795 aa1.98□□□□□ -2.09
USP6NL-202ENST00000379237 KRTAP5-2Q701N4 177 aa1.93□□□□□ -2.1
USP6NL-202ENST00000379237 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.1
USP6NL-202ENST00000379237 KRTAP5-1Q6L8H4 278 aa1.83□□□□□ -2.12
USP6NL-202ENST00000379237 MUC5BQ9HC84 5762 aaPredicted RBP1.82□□□□□ -2.12
USP6NL-202ENST00000379237 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
USP6NL-202ENST00000379237 KRTAP5-8O75690 187 aa1.73□□□□□ -2.13
USP6NL-202ENST00000379237 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.71□□□□□ -2.14
USP6NL-202ENST00000379237 AHNAKQ09666 5890 aaKnown RBP1.66□□□□□ -2.14
USP6NL-202ENST00000379237 PHGR1C9JFL3 82 aa1.6□□□□□ -2.15
USP6NL-202ENST00000379237 KRTAP5-7Q6L8G8 165 aa1.58□□□□□ -2.16
USP6NL-202ENST00000379237 KRTAP5-11Q6L8G4 156 aa1.46□□□□□ -2.18
USP6NL-202ENST00000379237 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 12 ms