RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 KRTAP4-7Q9BYR0 210 aa2.9□□□□□ -1.94
GPCPD1-201ENST00000379019 KRTAP4-8A0A0G2JLE6 195 aa2.87□□□□□ -1.95
GPCPD1-201ENST00000379019 KRTAP4-8Q9BYQ9 185 aa2.87□□□□□ -1.95
GPCPD1-201ENST00000379019 KRTAP5-9P26371 169 aa2.82□□□□□ -1.96
GPCPD1-201ENST00000379019 TNP1P09430 55 aa2.79□□□□□ -1.96
GPCPD1-201ENST00000379019 KRTAP8-1Q8IUC2 63 aa2.77□□□□□ -1.97
GPCPD1-201ENST00000379019 KRTAP19-5Q3LI72 72 aa2.71□□□□□ -1.98
GPCPD1-201ENST00000379019 MDN1Q9NU22 5596 aa2.7□□□□□ -1.98
GPCPD1-201ENST00000379019 LCE1AQ5T7P2 110 aa2.7□□□□□ -1.98
GPCPD1-201ENST00000379019 KRTAP12-3P60328 96 aa2.7□□□□□ -1.98
GPCPD1-201ENST00000379019 LOC100996750A0A140TA64 210 aa2.68□□□□□ -1.98
GPCPD1-201ENST00000379019 KRTAP4-3Q9BYR4 195 aa2.68□□□□□ -1.98
GPCPD1-201ENST00000379019 KRTAP20-1Q3LI63 56 aa2.67□□□□□ -1.98
GPCPD1-201ENST00000379019 SYNE2Q8WXH0 6885 aaKnown RBP2.67□□□□□ -1.98
GPCPD1-201ENST00000379019 KRTAP2-3P0C7H8 128 aa2.66□□□□□ -1.98
GPCPD1-201ENST00000379019 KRTAP2-4Q9BYR9 128 aa2.66□□□□□ -1.98
GPCPD1-201ENST00000379019 KRTAP19-7Q3SYF9 63 aa2.64□□□□□ -1.99
GPCPD1-201ENST00000379019 NEBP20929 6669 aa2.63□□□□□ -1.99
GPCPD1-201ENST00000379019 SPRR2FQ96RM1 72 aa2.63□□□□□ -1.99
GPCPD1-201ENST00000379019 SPRR2EP22531 72 aa2.62□□□□□ -1.99
GPCPD1-201ENST00000379019 SPRR2BP35325 72 aa2.62□□□□□ -1.99
GPCPD1-201ENST00000379019 SPRR2AP35326 72 aa2.62□□□□□ -1.99
GPCPD1-201ENST00000379019 MACF1Q9UPN3 7388 aaKnown RBP2.58□□□□□ -2
GPCPD1-201ENST00000379019 LCE3CQ5T5A8 94 aa2.58□□□□□ -2
GPCPD1-201ENST00000379019 KRTAP2-2Q9BYT5 123 aa2.56□□□□□ -2
GPCPD1-201ENST00000379019 KRTAP2-1Q9BYU5 128 aa2.56□□□□□ -2
GPCPD1-201ENST00000379019 SPRR2DP22532 72 aa2.56□□□□□ -2
GPCPD1-201ENST00000379019 KRTAP4-9Q9BYQ8 210 aa2.52□□□□□ -2.01
GPCPD1-201ENST00000379019 MT1EP04732 61 aa2.5□□□□□ -2.01
GPCPD1-201ENST00000379019 MT1GP13640 62 aa2.5□□□□□ -2.01
GPCPD1-201ENST00000379019 KRTAP19-3Q7Z4W3 81 aa2.5□□□□□ -2.01
GPCPD1-201ENST00000379019 LCE5AQ5TCM9 118 aa2.48□□□□□ -2.01
GPCPD1-201ENST00000379019 LCE3BQ5TA77 95 aa2.48□□□□□ -2.01
GPCPD1-201ENST00000379019 MT1LQ93083 61 aa2.45□□□□□ -2.02
GPCPD1-201ENST00000379019 LCE4AQ5TA78 99 aa2.41□□□□□ -2.02
GPCPD1-201ENST00000379019 MT1MQ8N339 61 aa2.37□□□□□ -2.03
GPCPD1-201ENST00000379019 KRTAP5-4Q6L8H1 288 aa2.29□□□□□ -2.04
GPCPD1-201ENST00000379019 KRTAP12-4P60329 112 aa2.28□□□□□ -2.05
GPCPD1-201ENST00000379019 KRTAP5-5Q701N2 237 aaPredicted RBP2.26□□□□□ -2.05
GPCPD1-201ENST00000379019 KRTAP6-1Q3LI64 71 aa2.21□□□□□ -2.06
GPCPD1-201ENST00000379019 LCE1DQ5T752 114 aa2.18□□□□□ -2.06
GPCPD1-201ENST00000379019 MT1AP04731 61 aa2.11□□□□□ -2.07
GPCPD1-201ENST00000379019 MT4P47944 62 aa2.1□□□□□ -2.07
GPCPD1-201ENST00000379019 KRTAP20-2Q3LI61 65 aa2.1□□□□□ -2.07
GPCPD1-201ENST00000379019 PRM1P04553 51 aa2.08□□□□□ -2.08
GPCPD1-201ENST00000379019 LCE1EQ5T753 118 aa2.05□□□□□ -2.08
GPCPD1-201ENST00000379019 KRTAP5-7Q6L8G8 165 aa2.05□□□□□ -2.08
GPCPD1-201ENST00000379019 KRTAP5-10Q6L8G5 202 aa2.05□□□□□ -2.08
GPCPD1-201ENST00000379019 KRTAP5-3Q6L8H2 238 aa2.04□□□□□ -2.08
GPCPD1-201ENST00000379019 KRTAP4-6Q9BYQ5 205 aa2.03□□□□□ -2.08
GPCPD1-201ENST00000379019 KRTAP5-2Q701N4 177 aa2.03□□□□□ -2.08
GPCPD1-201ENST00000379019 GPR98Q8WXG9 6306 aa2.03□□□□□ -2.09
GPCPD1-201ENST00000379019 KRTAP9-4Q9BYQ2 154 aa2.02□□□□□ -2.09
GPCPD1-201ENST00000379019 KRTAP6-2Q3LI66 62 aa2□□□□□ -2.09
GPCPD1-201ENST00000379019 AHNAK2Q8IVF2 5795 aa1.98□□□□□ -2.09
GPCPD1-201ENST00000379019 HMCN1Q96RW7 5635 aa1.96□□□□□ -2.1
GPCPD1-201ENST00000379019 LCE3DQ9BYE3 92 aa1.94□□□□□ -2.1
GPCPD1-201ENST00000379019 KRTAP4-11Q9BYQ6 195 aa1.89□□□□□ -2.11
GPCPD1-201ENST00000379019 LCE3EQ5T5B0 92 aa1.88□□□□□ -2.11
GPCPD1-201ENST00000379019 MUC5ACP98088 5654 aa1.88□□□□□ -2.11
GPCPD1-201ENST00000379019 KRTAP5-8O75690 187 aa1.84□□□□□ -2.12
GPCPD1-201ENST00000379019 KRTAP9-9Q9BYP9 154 aa1.79□□□□□ -2.12
GPCPD1-201ENST00000379019 AHNAKQ09666 5890 aaKnown RBP1.77□□□□□ -2.13
GPCPD1-201ENST00000379019 LCE1FQ5T754 118 aa1.73□□□□□ -2.13
GPCPD1-201ENST00000379019 KRTAP5-1Q6L8H4 278 aa1.73□□□□□ -2.13
GPCPD1-201ENST00000379019 MUC5BQ9HC84 5762 aaPredicted RBP1.68□□□□□ -2.14
GPCPD1-201ENST00000379019 LCE1CQ5T751 118 aa1.66□□□□□ -2.14
GPCPD1-201ENST00000379019 LCE1BQ5T7P3 118 aa1.66□□□□□ -2.14
GPCPD1-201ENST00000379019 KRTAP4-2Q9BYR5 136 aa1.58□□□□□ -2.16
GPCPD1-201ENST00000379019 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.57□□□□□ -2.16
GPCPD1-201ENST00000379019 KRTAP4-12Q9BQ66 201 aa1.56□□□□□ -2.16
GPCPD1-201ENST00000379019 KRTAP5-11Q6L8G4 156 aa1.5□□□□□ -2.17
GPCPD1-201ENST00000379019 KRTAP4-4Q9BYR3 166 aa1.48□□□□□ -2.17
GPCPD1-201ENST00000379019 KRTAP21-2Q3LI59 83 aa1.43□□□□□ -2.18
GPCPD1-201ENST00000379019 KRTAP21-1Q3LI58 79 aa1.28□□□□□ -2.2
GPCPD1-201ENST00000379019 PHGR1C9JFL3 82 aa1.26□□□□□ -2.21
GPCPD1-201ENST00000379019 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 87.6 ms