RNA–Protein interactions for RNA: ENST00000377269.3

UBA1-202, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2 BASIC

Gene UBA1, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-202ENST00000377269 KRTAP19-7Q3SYF9 63 aa5.26□□□□□ -1.57
UBA1-202ENST00000377269 KRTAP2-3P0C7H8 128 aa5.19□□□□□ -1.58
UBA1-202ENST00000377269 KRTAP2-4Q9BYR9 128 aa5.19□□□□□ -1.58
UBA1-202ENST00000377269 KRTAP2-1Q9BYU5 128 aa5.19□□□□□ -1.58
UBA1-202ENST00000377269 SPRR2FQ96RM1 72 aa5.18□□□□□ -1.58
UBA1-202ENST00000377269 MDN1Q9NU22 5596 aa5.17□□□□□ -1.58
UBA1-202ENST00000377269 KRTAP9-6A8MVA2 160 aa5.16□□□□□ -1.58
UBA1-202ENST00000377269 MT1EP04732 61 aa5.16□□□□□ -1.58
UBA1-202ENST00000377269 KRTAP5-9P26371 169 aa5.12□□□□□ -1.59
UBA1-202ENST00000377269 KRTAP6-3Q3LI67 103 aa5.07□□□□□ -1.6
UBA1-202ENST00000377269 KRTAP9-7A8MTY7 169 aa5.04□□□□□ -1.6
UBA1-202ENST00000377269 MT1LQ93083 61 aa5.04□□□□□ -1.6
UBA1-202ENST00000377269 LCE5AQ5TCM9 118 aa4.98□□□□□ -1.61
UBA1-202ENST00000377269 LCE1AQ5T7P2 110 aa4.97□□□□□ -1.61
UBA1-202ENST00000377269 KRTAP19-3Q7Z4W3 81 aa4.97□□□□□ -1.61
UBA1-202ENST00000377269 KRTAP4-7Q9BYR0 210 aa4.96□□□□□ -1.62
UBA1-202ENST00000377269 SPRR2EP22531 72 aa4.93□□□□□ -1.62
UBA1-202ENST00000377269 SPRR2BP35325 72 aa4.93□□□□□ -1.62
UBA1-202ENST00000377269 SPRR2AP35326 72 aa4.93□□□□□ -1.62
UBA1-202ENST00000377269 DSTQ03001 7570 aaKnown RBP4.92□□□□□ -1.62
UBA1-202ENST00000377269 KRTAP19-4Q3LI73 84 aa4.91□□□□□ -1.62
UBA1-202ENST00000377269 MT1GP13640 62 aa4.89□□□□□ -1.63
UBA1-202ENST00000377269 MT1MQ8N339 61 aa4.86□□□□□ -1.63
UBA1-202ENST00000377269 KRTAP4-3Q9BYR4 195 aa4.86□□□□□ -1.63
UBA1-202ENST00000377269 NEBP20929 6669 aa4.85□□□□□ -1.63
UBA1-202ENST00000377269 KRTAP9-4Q9BYQ2 154 aa4.79□□□□□ -1.64
UBA1-202ENST00000377269 SPRR2DP22532 72 aa4.74□□□□□ -1.65
UBA1-202ENST00000377269 KRTAP2-2Q9BYT5 123 aa4.68□□□□□ -1.66
UBA1-202ENST00000377269 KRTAP12-4P60329 112 aa4.66□□□□□ -1.66
UBA1-202ENST00000377269 LOC100996750A0A140TA64 210 aa4.66□□□□□ -1.66
UBA1-202ENST00000377269 KRTAP9-9Q9BYP9 154 aa4.6□□□□□ -1.67
UBA1-202ENST00000377269 LCE3BQ5TA77 95 aa4.56□□□□□ -1.68
UBA1-202ENST00000377269 LCE1FQ5T754 118 aa4.55□□□□□ -1.68
UBA1-202ENST00000377269 KRTAP20-1Q3LI63 56 aa4.43□□□□□ -1.7
UBA1-202ENST00000377269 LCE4AQ5TA78 99 aa4.41□□□□□ -1.7
UBA1-202ENST00000377269 KRTAP5-5Q701N2 237 aaPredicted RBP4.39□□□□□ -1.71
UBA1-202ENST00000377269 SYNE1Q8NF91 8797 aaKnown RBP4.31□□□□□ -1.72
UBA1-202ENST00000377269 MT1AP04731 61 aa4.28□□□□□ -1.72
UBA1-202ENST00000377269 KRTAP6-1Q3LI64 71 aa4.28□□□□□ -1.72
UBA1-202ENST00000377269 KRTAP5-4Q6L8H1 288 aa4.23□□□□□ -1.73
UBA1-202ENST00000377269 KRTAP4-9Q9BYQ8 210 aa4.22□□□□□ -1.73
UBA1-202ENST00000377269 MT4P47944 62 aa4.18□□□□□ -1.74
UBA1-202ENST00000377269 PRM1P04553 51 aa4.17□□□□□ -1.74
UBA1-202ENST00000377269 LCE3EQ5T5B0 92 aa4.15□□□□□ -1.74
UBA1-202ENST00000377269 LCE3DQ9BYE3 92 aa4.15□□□□□ -1.74
UBA1-202ENST00000377269 KRTAP4-6Q9BYQ5 205 aa4.15□□□□□ -1.75
UBA1-202ENST00000377269 HMCN1Q96RW7 5635 aa4.14□□□□□ -1.75
UBA1-202ENST00000377269 LCE1EQ5T753 118 aa4.13□□□□□ -1.75
UBA1-202ENST00000377269 LCE1DQ5T752 114 aa4.11□□□□□ -1.75
UBA1-202ENST00000377269 MT3P25713 68 aa4.08□□□□□ -1.76
UBA1-202ENST00000377269 KRTAP20-2Q3LI61 65 aa3.99□□□□□ -1.77
UBA1-202ENST00000377269 KRTAP6-2Q3LI66 62 aa3.96□□□□□ -1.78
UBA1-202ENST00000377269 OBSCNQ5VST9 7968 aa3.93□□□□□ -1.78
UBA1-202ENST00000377269 KRTAP5-3Q6L8H2 238 aa3.85□□□□□ -1.79
UBA1-202ENST00000377269 KRTAP5-2Q701N4 177 aa3.82□□□□□ -1.8
UBA1-202ENST00000377269 AHNAK2Q8IVF2 5795 aa3.68□□□□□ -1.82
UBA1-202ENST00000377269 KRTAP4-11Q9BYQ6 195 aa3.5□□□□□ -1.85
UBA1-202ENST00000377269 KRTAP4-12Q9BQ66 201 aa3.48□□□□□ -1.85
UBA1-202ENST00000377269 KRTAP5-10Q6L8G5 202 aa3.46□□□□□ -1.86
UBA1-202ENST00000377269 GPR98Q8WXG9 6306 aa3.46□□□□□ -1.86
UBA1-202ENST00000377269 KRTAP5-8O75690 187 aa3.37□□□□□ -1.87
UBA1-202ENST00000377269 KRTAP5-1Q6L8H4 278 aa3.36□□□□□ -1.87
UBA1-202ENST00000377269 MUC5ACP98088 5654 aa3.28□□□□□ -1.88
UBA1-202ENST00000377269 LCE1BQ5T7P3 118 aa3.24□□□□□ -1.89
UBA1-202ENST00000377269 KRTAP4-2Q9BYR5 136 aa3.19□□□□□ -1.9
UBA1-202ENST00000377269 KRTAP5-7Q6L8G8 165 aa3.18□□□□□ -1.9
UBA1-202ENST00000377269 LCE1CQ5T751 118 aa3.14□□□□□ -1.91
UBA1-202ENST00000377269 MUC5BQ9HC84 5762 aaPredicted RBP3.05□□□□□ -1.92
UBA1-202ENST00000377269 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.9□□□□□ -1.95
UBA1-202ENST00000377269 AHNAKQ09666 5890 aaKnown RBP2.81□□□□□ -1.96
UBA1-202ENST00000377269 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
UBA1-202ENST00000377269 KRTAP5-11Q6L8G4 156 aa2.77□□□□□ -1.97
UBA1-202ENST00000377269 KRTAP21-1Q3LI58 79 aa2.73□□□□□ -1.97
UBA1-202ENST00000377269 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
UBA1-202ENST00000377269 MUC19Q7Z5P9 8384 aa2.47□□□□□ -2.01
UBA1-202ENST00000377269 PHGR1C9JFL3 82 aa2.41□□□□□ -2.02
UBA1-202ENST00000377269 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 80.7 ms