RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 LCE3DQ9BYE3 92 aa3.75□□□□□ -1.81
PTCH1-203ENST00000375274 KRTAP19-3Q7Z4W3 81 aa3.74□□□□□ -1.81
PTCH1-203ENST00000375274 SPRR2DP22532 72 aa3.72□□□□□ -1.81
PTCH1-203ENST00000375274 FAT4Q6V0I7 4981 aa3.72□□□□□ -1.81
PTCH1-203ENST00000375274 LCE3EQ5T5B0 92 aa3.7□□□□□ -1.82
PTCH1-203ENST00000375274 FSIP2Q5CZC0 6907 aa3.64□□□□□ -1.83
PTCH1-203ENST00000375274 KRTAP19-6Q3LI70 58 aa3.64□□□□□ -1.83
PTCH1-203ENST00000375274 MT1MQ8N339 61 aa3.61□□□□□ -1.83
PTCH1-203ENST00000375274 KRTAP19-7Q3SYF9 63 aa3.6□□□□□ -1.83
PTCH1-203ENST00000375274 MUC2Q02817 5179 aa3.57□□□□□ -1.84
PTCH1-203ENST00000375274 LOC100996750A0A140TA64 210 aa3.57□□□□□ -1.84
PTCH1-203ENST00000375274 KRTAP4-3Q9BYR4 195 aa3.55□□□□□ -1.84
PTCH1-203ENST00000375274 KRTAP9-7A8MTY7 169 aa3.54□□□□□ -1.84
PTCH1-203ENST00000375274 OBSCNQ5VST9 7968 aa3.51□□□□□ -1.85
PTCH1-203ENST00000375274 KRTAP2-3P0C7H8 128 aa3.5□□□□□ -1.85
PTCH1-203ENST00000375274 KRTAP2-4Q9BYR9 128 aa3.5□□□□□ -1.85
PTCH1-203ENST00000375274 KRTAP2-1Q9BYU5 128 aa3.5□□□□□ -1.85
PTCH1-203ENST00000375274 KRTAP6-3Q3LI67 103 aa3.49□□□□□ -1.85
PTCH1-203ENST00000375274 PRM1P04553 51 aa3.45□□□□□ -1.86
PTCH1-203ENST00000375274 KRTAP20-1Q3LI63 56 aa3.45□□□□□ -1.86
PTCH1-203ENST00000375274 KRTAP9-6A8MVA2 160 aa3.44□□□□□ -1.86
PTCH1-203ENST00000375274 MT3P25713 68 aa3.42□□□□□ -1.86
PTCH1-203ENST00000375274 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.42□□□□□ -1.86
PTCH1-203ENST00000375274 FCGBPQ9Y6R7 5405 aaPredicted RBP3.36□□□□□ -1.87
PTCH1-203ENST00000375274 KRTAP4-9Q9BYQ8 210 aa3.35□□□□□ -1.87
PTCH1-203ENST00000375274 MT1AP04731 61 aa3.35□□□□□ -1.87
PTCH1-203ENST00000375274 LCE1AQ5T7P2 110 aa3.31□□□□□ -1.88
PTCH1-203ENST00000375274 DSTQ03001 7570 aaKnown RBP3.28□□□□□ -1.88
PTCH1-203ENST00000375274 MT4P47944 62 aa3.27□□□□□ -1.89
PTCH1-203ENST00000375274 USH2AO75445 5202 aa3.23□□□□□ -1.89
PTCH1-203ENST00000375274 SYNE2Q8WXH0 6885 aaKnown RBP3.23□□□□□ -1.89
PTCH1-203ENST00000375274 KRTAP2-2Q9BYT5 123 aa3.21□□□□□ -1.9
PTCH1-203ENST00000375274 KRTAP6-1Q3LI64 71 aa3.19□□□□□ -1.9
PTCH1-203ENST00000375274 LCE5AQ5TCM9 118 aa3.18□□□□□ -1.9
PTCH1-203ENST00000375274 LCE1DQ5T752 114 aa3.16□□□□□ -1.9
PTCH1-203ENST00000375274 LCE1BQ5T7P3 118 aa3.15□□□□□ -1.9
PTCH1-203ENST00000375274 KMT2DO14686 5537 aa3.15□□□□□ -1.91
PTCH1-203ENST00000375274 LCE4AQ5TA78 99 aa3.11□□□□□ -1.91
PTCH1-203ENST00000375274 KRTAP6-2Q3LI66 62 aa3.1□□□□□ -1.91
PTCH1-203ENST00000375274 KRTAP9-4Q9BYQ2 154 aa3.05□□□□□ -1.92
PTCH1-203ENST00000375274 SSPOA2VEC9 5147 aa3□□□□□ -1.93
PTCH1-203ENST00000375274 KRTAP5-9P26371 169 aa2.99□□□□□ -1.93
PTCH1-203ENST00000375274 MUC12Q9UKN1 5478 aa2.97□□□□□ -1.93
PTCH1-203ENST00000375274 MACF1Q9UPN3 7388 aaKnown RBP2.92□□□□□ -1.94
PTCH1-203ENST00000375274 NEBP20929 6669 aa2.89□□□□□ -1.95
PTCH1-203ENST00000375274 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
PTCH1-203ENST00000375274 GPR98Q8WXG9 6306 aa2.76□□□□□ -1.97
PTCH1-203ENST00000375274 MDN1Q9NU22 5596 aa2.72□□□□□ -1.97
PTCH1-203ENST00000375274 KRTAP9-9Q9BYP9 154 aa2.6□□□□□ -1.99
PTCH1-203ENST00000375274 LCE1CQ5T751 118 aa2.58□□□□□ -2
PTCH1-203ENST00000375274 LCE1EQ5T753 118 aa2.58□□□□□ -2
PTCH1-203ENST00000375274 LCE1FQ5T754 118 aa2.58□□□□□ -2
PTCH1-203ENST00000375274 KRTAP4-6Q9BYQ5 205 aa2.57□□□□□ -2
PTCH1-203ENST00000375274 KRTAP5-5Q701N2 237 aaPredicted RBP2.56□□□□□ -2
PTCH1-203ENST00000375274 KRTAP4-11Q9BYQ6 195 aa2.56□□□□□ -2
PTCH1-203ENST00000375274 KRTAP5-4Q6L8H1 288 aa2.52□□□□□ -2.01
PTCH1-203ENST00000375274 KRTAP20-2Q3LI61 65 aa2.51□□□□□ -2.01
PTCH1-203ENST00000375274 MUC5ACP98088 5654 aa2.3□□□□□ -2.04
PTCH1-203ENST00000375274 KRTAP5-3Q6L8H2 238 aa2.29□□□□□ -2.04
PTCH1-203ENST00000375274 AHNAK2Q8IVF2 5795 aa2.28□□□□□ -2.04
PTCH1-203ENST00000375274 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
PTCH1-203ENST00000375274 HMCN1Q96RW7 5635 aa2.24□□□□□ -2.05
PTCH1-203ENST00000375274 KRTAP4-12Q9BQ66 201 aa2.18□□□□□ -2.06
PTCH1-203ENST00000375274 KRTAP4-2Q9BYR5 136 aa2.18□□□□□ -2.06
PTCH1-203ENST00000375274 KRTAP5-2Q701N4 177 aa2.17□□□□□ -2.06
PTCH1-203ENST00000375274 KRTAP5-10Q6L8G5 202 aa2.02□□□□□ -2.09
PTCH1-203ENST00000375274 AHNAKQ09666 5890 aaKnown RBP2.02□□□□□ -2.09
PTCH1-203ENST00000375274 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
PTCH1-203ENST00000375274 KRTAP5-8O75690 187 aa1.99□□□□□ -2.09
PTCH1-203ENST00000375274 KRTAP5-1Q6L8H4 278 aa1.85□□□□□ -2.11
PTCH1-203ENST00000375274 MUC5BQ9HC84 5762 aaPredicted RBP1.78□□□□□ -2.12
PTCH1-203ENST00000375274 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
PTCH1-203ENST00000375274 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
PTCH1-203ENST00000375274 KRTAP5-11Q6L8G4 156 aa1.72□□□□□ -2.13
PTCH1-203ENST00000375274 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.72□□□□□ -2.13
PTCH1-203ENST00000375274 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
PTCH1-203ENST00000375274 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 71.2 ms