RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 MDN1Q9NU22 5596 aa7.77□□□□□ -1.17
SYNC-201ENST00000373484 NEBP20929 6669 aa7.76□□□□□ -1.17
SYNC-201ENST00000373484 INE1O15225 51 aa7.71□□□□□ -1.17
SYNC-201ENST00000373484 KRTAP12-3P60328 96 aa7.68□□□□□ -1.18
SYNC-201ENST00000373484 SPRR2EP22531 72 aa7.67□□□□□ -1.18
SYNC-201ENST00000373484 SPRR2BP35325 72 aa7.67□□□□□ -1.18
SYNC-201ENST00000373484 SPRR2AP35326 72 aa7.67□□□□□ -1.18
SYNC-201ENST00000373484 LCE1AQ5T7P2 110 aa7.64□□□□□ -1.19
SYNC-201ENST00000373484 KRTAP19-7Q3SYF9 63 aa7.58□□□□□ -1.2
SYNC-201ENST00000373484 MT1EP04732 61 aa7.49□□□□□ -1.21
SYNC-201ENST00000373484 KRTAP19-5Q3LI72 72 aa7.48□□□□□ -1.21
SYNC-201ENST00000373484 KRTAP20-1Q3LI63 56 aa7.45□□□□□ -1.22
SYNC-201ENST00000373484 SPRR2DP22532 72 aa7.41□□□□□ -1.22
SYNC-201ENST00000373484 KRTAP2-3P0C7H8 128 aa7.36□□□□□ -1.23
SYNC-201ENST00000373484 KRTAP2-4Q9BYR9 128 aa7.36□□□□□ -1.23
SYNC-201ENST00000373484 KRTAP19-3Q7Z4W3 81 aa7.35□□□□□ -1.23
SYNC-201ENST00000373484 LCE5AQ5TCM9 118 aa7.32□□□□□ -1.24
SYNC-201ENST00000373484 LCE3CQ5T5A8 94 aa7.27□□□□□ -1.25
SYNC-201ENST00000373484 MT1LQ93083 61 aa7.22□□□□□ -1.25
SYNC-201ENST00000373484 MT1GP13640 62 aa7.22□□□□□ -1.25
SYNC-201ENST00000373484 KRTAP19-4Q3LI73 84 aa7.21□□□□□ -1.26
SYNC-201ENST00000373484 LCE3BQ5TA77 95 aa7.19□□□□□ -1.26
SYNC-201ENST00000373484 KRTAP2-2Q9BYT5 123 aa7.16□□□□□ -1.26
SYNC-201ENST00000373484 KRTAP2-1Q9BYU5 128 aa7.16□□□□□ -1.26
SYNC-201ENST00000373484 MT1MQ8N339 61 aa7.11□□□□□ -1.27
SYNC-201ENST00000373484 DSTQ03001 7570 aaKnown RBP7.01□□□□□ -1.29
SYNC-201ENST00000373484 KRTAP4-3Q9BYR4 195 aa6.91□□□□□ -1.3
SYNC-201ENST00000373484 KRTAP9-6A8MVA2 160 aa6.89□□□□□ -1.31
SYNC-201ENST00000373484 KRTAP4-7Q9BYR0 210 aa6.88□□□□□ -1.31
SYNC-201ENST00000373484 LCE4AQ5TA78 99 aa6.59□□□□□ -1.35
SYNC-201ENST00000373484 KRTAP4-9Q9BYQ8 210 aa6.57□□□□□ -1.36
SYNC-201ENST00000373484 KRTAP5-4Q6L8H1 288 aa6.56□□□□□ -1.36
SYNC-201ENST00000373484 LOC100996750A0A140TA64 210 aa6.5□□□□□ -1.37
SYNC-201ENST00000373484 KRTAP5-5Q701N2 237 aaPredicted RBP6.49□□□□□ -1.37
SYNC-201ENST00000373484 LCE1DQ5T752 114 aa6.48□□□□□ -1.37
SYNC-201ENST00000373484 MT4P47944 62 aa6.45□□□□□ -1.38
SYNC-201ENST00000373484 HMCN1Q96RW7 5635 aa6.35□□□□□ -1.39
SYNC-201ENST00000373484 KRTAP4-6Q9BYQ5 205 aa6.32□□□□□ -1.4
SYNC-201ENST00000373484 KRTAP12-4P60329 112 aa6.2□□□□□ -1.42
SYNC-201ENST00000373484 MT1AP04731 61 aa6.15□□□□□ -1.42
SYNC-201ENST00000373484 KRTAP20-2Q3LI61 65 aa6.15□□□□□ -1.42
SYNC-201ENST00000373484 SYNE1Q8NF91 8797 aaKnown RBP6.14□□□□□ -1.43
SYNC-201ENST00000373484 KRTAP6-1Q3LI64 71 aa6.09□□□□□ -1.43
SYNC-201ENST00000373484 KRTAP5-3Q6L8H2 238 aa5.97□□□□□ -1.45
SYNC-201ENST00000373484 AHNAK2Q8IVF2 5795 aa5.95□□□□□ -1.46
SYNC-201ENST00000373484 GPR98Q8WXG9 6306 aa5.92□□□□□ -1.46
SYNC-201ENST00000373484 KRTAP9-4Q9BYQ2 154 aa5.9□□□□□ -1.46
SYNC-201ENST00000373484 KRTAP5-10Q6L8G5 202 aa5.83□□□□□ -1.48
SYNC-201ENST00000373484 KRTAP5-2Q701N4 177 aa5.82□□□□□ -1.48
SYNC-201ENST00000373484 KRTAP6-2Q3LI66 62 aa5.74□□□□□ -1.49
SYNC-201ENST00000373484 LCE3DQ9BYE3 92 aa5.62□□□□□ -1.51
SYNC-201ENST00000373484 MT3P25713 68 aa5.6□□□□□ -1.51
SYNC-201ENST00000373484 LCE3EQ5T5B0 92 aa5.6□□□□□ -1.51
SYNC-201ENST00000373484 KRTAP5-7Q6L8G8 165 aa5.55□□□□□ -1.52
SYNC-201ENST00000373484 KRTAP4-11Q9BYQ6 195 aa5.51□□□□□ -1.53
SYNC-201ENST00000373484 OBSCNQ5VST9 7968 aa5.34□□□□□ -1.55
SYNC-201ENST00000373484 PRM1P04553 51 aa5.34□□□□□ -1.55
SYNC-201ENST00000373484 KRTAP5-8O75690 187 aa5.33□□□□□ -1.56
SYNC-201ENST00000373484 KRTAP5-1Q6L8H4 278 aa5.13□□□□□ -1.59
SYNC-201ENST00000373484 LCE1EQ5T753 118 aa5.06□□□□□ -1.6
SYNC-201ENST00000373484 MUC5ACP98088 5654 aa4.97□□□□□ -1.61
SYNC-201ENST00000373484 KRTAP9-9Q9BYP9 154 aa4.96□□□□□ -1.62
SYNC-201ENST00000373484 MUC5BQ9HC84 5762 aaPredicted RBP4.84□□□□□ -1.63
SYNC-201ENST00000373484 KRTAP4-2Q9BYR5 136 aa4.75□□□□□ -1.65
SYNC-201ENST00000373484 AHNAKQ09666 5890 aaKnown RBP4.72□□□□□ -1.65
SYNC-201ENST00000373484 LCE1BQ5T7P3 118 aa4.71□□□□□ -1.66
SYNC-201ENST00000373484 LCE1CQ5T751 118 aa4.69□□□□□ -1.66
SYNC-201ENST00000373484 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.34□□□□□ -1.71
SYNC-201ENST00000373484 KRTAP5-11Q6L8G4 156 aa4.23□□□□□ -1.73
SYNC-201ENST00000373484 KRTAP4-12Q9BQ66 201 aa4.14□□□□□ -1.75
SYNC-201ENST00000373484 KRTAP21-2Q3LI59 83 aa4.02□□□□□ -1.77
SYNC-201ENST00000373484 LCE1FQ5T754 118 aa4.02□□□□□ -1.77
SYNC-201ENST00000373484 PHGR1C9JFL3 82 aa3.63□□□□□ -1.83
SYNC-201ENST00000373484 KRTAP4-4Q9BYR3 166 aa3.6□□□□□ -1.83
SYNC-201ENST00000373484 KRTAP21-1Q3LI58 79 aa3.51□□□□□ -1.85
SYNC-201ENST00000373484 MUC19Q7Z5P9 8384 aa3.26□□□□□ -1.89
SYNC-201ENST00000373484 MUC16Q8WXI7 14507 aa2.34□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 12.3 ms