RNA–Protein interactions for RNA: ENST00000373193.7

PTPRT-205, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-205ENST00000373193 SYNE2Q8WXH0 6885 aaKnown RBP2.57□□□□□ -2
PTPRT-205ENST00000373193 LCE1CQ5T751 118 aa2.57□□□□□ -2
PTPRT-205ENST00000373193 LCE1EQ5T753 118 aa2.57□□□□□ -2
PTPRT-205ENST00000373193 LCE1FQ5T754 118 aa2.57□□□□□ -2
PTPRT-205ENST00000373193 LCE1AQ5T7P2 110 aa2.57□□□□□ -2
PTPRT-205ENST00000373193 KMT2CQ8NEZ4 4911 aaKnown RBP2.56□□□□□ -2
PTPRT-205ENST00000373193 KRTAP9-7A8MTY7 169 aa2.54□□□□□ -2
PTPRT-205ENST00000373193 MT1AP04731 61 aa2.52□□□□□ -2.01
PTPRT-205ENST00000373193 PCLOQ9Y6V0 5065 aa2.52□□□□□ -2.01
PTPRT-205ENST00000373193 LCE4AQ5TA78 99 aa2.51□□□□□ -2.01
PTPRT-205ENST00000373193 KRTAP19-2Q3LHN2 52 aa2.51□□□□□ -2.01
PTPRT-205ENST00000373193 KRTAP19-6Q3LI70 58 aa2.48□□□□□ -2.01
PTPRT-205ENST00000373193 RYR2Q92736 4967 aa2.47□□□□□ -2.01
PTPRT-205ENST00000373193 KRTAP6-1Q3LI64 71 aa2.45□□□□□ -2.02
PTPRT-205ENST00000373193 HERC2O95714 4834 aa2.45□□□□□ -2.02
PTPRT-205ENST00000373193 KRTAP19-7Q3SYF9 63 aa2.43□□□□□ -2.02
PTPRT-205ENST00000373193 KRTAP9-2Q9BYQ4 174 aa2.4□□□□□ -2.02
PTPRT-205ENST00000373193 BIRC6Q9NR09 4857 aa2.4□□□□□ -2.03
PTPRT-205ENST00000373193 KIAA1109Q2LD37 5005 aa2.39□□□□□ -2.03
PTPRT-205ENST00000373193 KRTAP9-6A8MVA2 160 aa2.39□□□□□ -2.03
PTPRT-205ENST00000373193 HYDINQ4G0P3 5121 aa2.39□□□□□ -2.03
PTPRT-205ENST00000373193 KRTAP2-2Q9BYT5 123 aa2.37□□□□□ -2.03
PTPRT-205ENST00000373193 KRTAP9-4Q9BYQ2 154 aa2.33□□□□□ -2.04
PTPRT-205ENST00000373193 KRTAP20-1Q3LI63 56 aa2.32□□□□□ -2.04
PTPRT-205ENST00000373193 HERC1Q15751 4861 aa2.29□□□□□ -2.04
PTPRT-205ENST00000373193 KRTAP4-11Q9BYQ6 195 aa2.29□□□□□ -2.04
PTPRT-205ENST00000373193 EPPK1P58107 5090 aaKnown RBP2.25□□□□□ -2.05
PTPRT-205ENST00000373193 SYNE1Q8NF91 8797 aaKnown RBP2.2□□□□□ -2.06
PTPRT-205ENST00000373193 KRTAP9-6A0A140TA67 174 aa2.19□□□□□ -2.06
PTPRT-205ENST00000373193 LCE2AQ5TA79 106 aaPredicted RBP2.17□□□□□ -2.06
PTPRT-205ENST00000373193 RNF213Q63HN8 5207 aa2.16□□□□□ -2.06
PTPRT-205ENST00000373193 HMCN2Q8NDA2 5059 aa2.16□□□□□ -2.06
PTPRT-205ENST00000373193 FSIP2Q5CZC0 6907 aa2.13□□□□□ -2.07
PTPRT-205ENST00000373193 KRTAP20-2Q3LI61 65 aa2.13□□□□□ -2.07
PTPRT-205ENST00000373193 UBR4Q5T4S7 5183 aa2.12□□□□□ -2.07
PTPRT-205ENST00000373193 MUC2Q02817 5179 aa2.12□□□□□ -2.07
PTPRT-205ENST00000373193 KRTAP4-4Q9BYR3 166 aa2.11□□□□□ -2.07
PTPRT-205ENST00000373193 KRTAP9-9Q9BYP9 154 aa2.09□□□□□ -2.08
PTPRT-205ENST00000373193 FAT4Q6V0I7 4981 aa2.06□□□□□ -2.08
PTPRT-205ENST00000373193 KRTAP6-3Q3LI67 103 aa2.04□□□□□ -2.08
PTPRT-205ENST00000373193 OBSCNQ5VST9 7968 aa2.02□□□□□ -2.09
PTPRT-205ENST00000373193 ABCA13Q86UQ4 5058 aa2.01□□□□□ -2.09
PTPRT-205ENST00000373193 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.99□□□□□ -2.09
PTPRT-205ENST00000373193 KRTAP4-12Q9BQ66 201 aa1.98□□□□□ -2.09
PTPRT-205ENST00000373193 KRTAP4-2Q9BYR5 136 aa1.98□□□□□ -2.09
PTPRT-205ENST00000373193 KRTAP4-6Q9BYQ5 205 aa1.95□□□□□ -2.1
PTPRT-205ENST00000373193 USH2AO75445 5202 aa1.92□□□□□ -2.1
PTPRT-205ENST00000373193 KMT2DO14686 5537 aa1.92□□□□□ -2.1
PTPRT-205ENST00000373193 FCGBPQ9Y6R7 5405 aaPredicted RBP1.85□□□□□ -2.11
PTPRT-205ENST00000373193 MUC12Q9UKN1 5478 aa1.85□□□□□ -2.11
PTPRT-205ENST00000373193 KRTAP5-5Q701N2 237 aaPredicted RBP1.84□□□□□ -2.11
PTPRT-205ENST00000373193 NEBP20929 6669 aa1.77□□□□□ -2.13
PTPRT-205ENST00000373193 DSTQ03001 7570 aaKnown RBP1.76□□□□□ -2.13
PTPRT-205ENST00000373193 MACF1Q9UPN3 7388 aaKnown RBP1.73□□□□□ -2.13
PTPRT-205ENST00000373193 GPR98Q8WXG9 6306 aa1.68□□□□□ -2.14
PTPRT-205ENST00000373193 SSPOA2VEC9 5147 aa1.66□□□□□ -2.14
PTPRT-205ENST00000373193 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
PTPRT-205ENST00000373193 MDN1Q9NU22 5596 aa1.66□□□□□ -2.14
PTPRT-205ENST00000373193 KRTAP5-9P26371 169 aa1.63□□□□□ -2.15
PTPRT-205ENST00000373193 KRTAP5-4Q6L8H1 288 aa1.58□□□□□ -2.16
PTPRT-205ENST00000373193 KRTAP5-2Q701N4 177 aa1.41□□□□□ -2.18
PTPRT-205ENST00000373193 MUC5ACP98088 5654 aa1.38□□□□□ -2.19
PTPRT-205ENST00000373193 AHNAK2Q8IVF2 5795 aa1.37□□□□□ -2.19
PTPRT-205ENST00000373193 PHGR1C9JFL3 82 aa1.36□□□□□ -2.19
PTPRT-205ENST00000373193 KRTAP5-10Q6L8G5 202 aa1.36□□□□□ -2.19
PTPRT-205ENST00000373193 KRTAP5-3Q6L8H2 238 aa1.34□□□□□ -2.19
PTPRT-205ENST00000373193 HMCN1Q96RW7 5635 aa1.3□□□□□ -2.2
PTPRT-205ENST00000373193 MUC5BQ9HC84 5762 aaPredicted RBP1.28□□□□□ -2.2
PTPRT-205ENST00000373193 KRTAP5-8O75690 187 aa1.26□□□□□ -2.21
PTPRT-205ENST00000373193 KRTAP5-1Q6L8H4 278 aa1.22□□□□□ -2.21
PTPRT-205ENST00000373193 AHNAKQ09666 5890 aaKnown RBP1.2□□□□□ -2.22
PTPRT-205ENST00000373193 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
PTPRT-205ENST00000373193 KRTAP21-2Q3LI59 83 aa1.1□□□□□ -2.23
PTPRT-205ENST00000373193 KRTAP5-11Q6L8G4 156 aa1.09□□□□□ -2.24
PTPRT-205ENST00000373193 KRTAP5-7Q6L8G8 165 aa1.05□□□□□ -2.24
PTPRT-205ENST00000373193 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.03□□□□□ -2.25
PTPRT-205ENST00000373193 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 96.2 ms