RNA–Protein interactions for RNA: ENST00000372792.6

CAP1-202, Transcript of cyclase associated actin cytoskeleton regulatory protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAP1, Length 1,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAP1-202ENST00000372792 KRTAP10-12P60413 245 aa4.18□□□□□ -1.74
CAP1-202ENST00000372792 KRTAP12-3P60328 96 aa4.11□□□□□ -1.75
CAP1-202ENST00000372792 KRTAP10-7P60409 375 aaPredicted RBP4.1□□□□□ -1.75
CAP1-202ENST00000372792 KRTAP19-5Q3LI72 72 aa3.95□□□□□ -1.78
CAP1-202ENST00000372792 USH2AO75445 5202 aa3.9□□□□□ -1.79
CAP1-202ENST00000372792 LCE3CQ5T5A8 94 aa3.87□□□□□ -1.79
CAP1-202ENST00000372792 KRTAP19-6Q3LI70 58 aa3.82□□□□□ -1.8
CAP1-202ENST00000372792 KRTAP19-7Q3SYF9 63 aa3.81□□□□□ -1.8
CAP1-202ENST00000372792 SSPOA2VEC9 5147 aa3.79□□□□□ -1.8
CAP1-202ENST00000372792 FSIP2Q5CZC0 6907 aa3.76□□□□□ -1.81
CAP1-202ENST00000372792 CRCT1Q9UGL9 99 aa3.76□□□□□ -1.81
CAP1-202ENST00000372792 INE1O15225 51 aa3.74□□□□□ -1.81
CAP1-202ENST00000372792 MT1EP04732 61 aa3.74□□□□□ -1.81
CAP1-202ENST00000372792 MT1LQ93083 61 aa3.72□□□□□ -1.81
CAP1-202ENST00000372792 KMT2DO14686 5537 aa3.66□□□□□ -1.82
CAP1-202ENST00000372792 KRTAP9-6A8MVA2 160 aa3.64□□□□□ -1.83
CAP1-202ENST00000372792 KRTAP2-3P0C7H8 128 aa3.59□□□□□ -1.84
CAP1-202ENST00000372792 KRTAP2-4Q9BYR9 128 aa3.59□□□□□ -1.84
CAP1-202ENST00000372792 KRTAP2-1Q9BYU5 128 aa3.59□□□□□ -1.84
CAP1-202ENST00000372792 MT1GP13640 62 aa3.53□□□□□ -1.84
CAP1-202ENST00000372792 KRTAP19-3Q7Z4W3 81 aa3.52□□□□□ -1.85
CAP1-202ENST00000372792 MT1MQ8N339 61 aa3.49□□□□□ -1.85
CAP1-202ENST00000372792 FCGBPQ9Y6R7 5405 aaPredicted RBP3.48□□□□□ -1.85
CAP1-202ENST00000372792 LCE1AQ5T7P2 110 aa3.39□□□□□ -1.87
CAP1-202ENST00000372792 KRTAP4-3Q9BYR4 195 aa3.39□□□□□ -1.87
CAP1-202ENST00000372792 SPRR2FQ96RM1 72 aa3.37□□□□□ -1.87
CAP1-202ENST00000372792 MUC12Q9UKN1 5478 aa3.3□□□□□ -1.88
CAP1-202ENST00000372792 KRTAP5-9P26371 169 aa3.28□□□□□ -1.88
CAP1-202ENST00000372792 SYNE2Q8WXH0 6885 aaKnown RBP3.28□□□□□ -1.88
CAP1-202ENST00000372792 MACF1Q9UPN3 7388 aaKnown RBP3.24□□□□□ -1.89
CAP1-202ENST00000372792 KRTAP2-2Q9BYT5 123 aa3.21□□□□□ -1.9
CAP1-202ENST00000372792 MT1AP04731 61 aa3.17□□□□□ -1.9
CAP1-202ENST00000372792 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.16□□□□□ -1.9
CAP1-202ENST00000372792 NEBP20929 6669 aa3.16□□□□□ -1.9
CAP1-202ENST00000372792 KRTAP5-11Q6L8G4 156 aa3.16□□□□□ -1.9
CAP1-202ENST00000372792 SPRR2EP22531 72 aa3.13□□□□□ -1.91
CAP1-202ENST00000372792 SPRR2BP35325 72 aa3.13□□□□□ -1.91
CAP1-202ENST00000372792 SPRR2AP35326 72 aa3.13□□□□□ -1.91
CAP1-202ENST00000372792 KRTAP20-1Q3LI63 56 aa3.13□□□□□ -1.91
CAP1-202ENST00000372792 KRTAP5-5Q701N2 237 aaPredicted RBP3.13□□□□□ -1.91
CAP1-202ENST00000372792 KRTAP6-1Q3LI64 71 aa3.1□□□□□ -1.91
CAP1-202ENST00000372792 KRTAP6-3Q3LI67 103 aa3.1□□□□□ -1.91
CAP1-202ENST00000372792 LCE1EQ5T753 118 aa3.09□□□□□ -1.92
CAP1-202ENST00000372792 KRTAP12-4P60329 112 aa3.06□□□□□ -1.92
CAP1-202ENST00000372792 MT3P25713 68 aa3.04□□□□□ -1.92
CAP1-202ENST00000372792 MDN1Q9NU22 5596 aa3.04□□□□□ -1.92
CAP1-202ENST00000372792 DSTQ03001 7570 aaKnown RBP3.02□□□□□ -1.93
CAP1-202ENST00000372792 SPRR2DP22532 72 aa3.01□□□□□ -1.93
CAP1-202ENST00000372792 GPR98Q8WXG9 6306 aa2.97□□□□□ -1.93
CAP1-202ENST00000372792 LCE3DQ9BYE3 92 aa2.96□□□□□ -1.94
CAP1-202ENST00000372792 LCE3EQ5T5B0 92 aa2.93□□□□□ -1.94
CAP1-202ENST00000372792 SYNE1Q8NF91 8797 aaKnown RBP2.88□□□□□ -1.95
CAP1-202ENST00000372792 KRTAP5-4Q6L8H1 288 aa2.84□□□□□ -1.96
CAP1-202ENST00000372792 KRTAP6-2Q3LI66 62 aa2.79□□□□□ -1.96
CAP1-202ENST00000372792 KRTAP5-1Q6L8H4 278 aa2.77□□□□□ -1.97
CAP1-202ENST00000372792 PRM1P04553 51 aa2.69□□□□□ -1.98
CAP1-202ENST00000372792 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.99
CAP1-202ENST00000372792 KRTAP5-2Q701N4 177 aa2.64□□□□□ -1.99
CAP1-202ENST00000372792 KRTAP20-2Q3LI61 65 aa2.61□□□□□ -1.99
CAP1-202ENST00000372792 LCE1FQ5T754 118 aa2.6□□□□□ -1.99
CAP1-202ENST00000372792 OBSCNQ5VST9 7968 aa2.56□□□□□ -2
CAP1-202ENST00000372792 MT4P47944 62 aa2.56□□□□□ -2
CAP1-202ENST00000372792 KRTAP5-10Q6L8G5 202 aa2.52□□□□□ -2.01
CAP1-202ENST00000372792 AHNAK2Q8IVF2 5795 aa2.5□□□□□ -2.01
CAP1-202ENST00000372792 KRTAP5-7Q6L8G8 165 aa2.5□□□□□ -2.01
CAP1-202ENST00000372792 HMCN1Q96RW7 5635 aa2.45□□□□□ -2.02
CAP1-202ENST00000372792 MUC5ACP98088 5654 aa2.32□□□□□ -2.04
CAP1-202ENST00000372792 AHNAKQ09666 5890 aaKnown RBP2.25□□□□□ -2.05
CAP1-202ENST00000372792 LCE1CQ5T751 118 aa2.24□□□□□ -2.05
CAP1-202ENST00000372792 LCE1BQ5T7P3 118 aa2.24□□□□□ -2.05
CAP1-202ENST00000372792 MUC5BQ9HC84 5762 aaPredicted RBP2.16□□□□□ -2.06
CAP1-202ENST00000372792 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
CAP1-202ENST00000372792 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
CAP1-202ENST00000372792 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
CAP1-202ENST00000372792 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
CAP1-202ENST00000372792 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
CAP1-202ENST00000372792 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 169.5 ms