RNA–Protein interactions for RNA: ENST00000372596.5

SCMH1-206, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SCMH1, Length 3,323 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-206ENST00000372596 KRTAP9-7A8MTY7 169 aa3.46□□□□□ -1.86
SCMH1-206ENST00000372596 KRTAP9-6A8MVA2 160 aa3.45□□□□□ -1.86
SCMH1-206ENST00000372596 KRTAP19-6Q3LI70 58 aa3.45□□□□□ -1.86
SCMH1-206ENST00000372596 KRTAP19-5Q3LI72 72 aa3.44□□□□□ -1.86
SCMH1-206ENST00000372596 MUC12Q9UKN1 5478 aa3.41□□□□□ -1.86
SCMH1-206ENST00000372596 OBSCNQ5VST9 7968 aa3.34□□□□□ -1.87
SCMH1-206ENST00000372596 KRTAP4-7Q9BYR0 210 aa3.33□□□□□ -1.88
SCMH1-206ENST00000372596 MDN1Q9NU22 5596 aa3.32□□□□□ -1.88
SCMH1-206ENST00000372596 DSTQ03001 7570 aaKnown RBP3.26□□□□□ -1.89
SCMH1-206ENST00000372596 SPRR2FQ96RM1 72 aa3.24□□□□□ -1.89
SCMH1-206ENST00000372596 KRTAP6-3Q3LI67 103 aa3.21□□□□□ -1.9
SCMH1-206ENST00000372596 KRTAP19-7Q3SYF9 63 aa3.21□□□□□ -1.9
SCMH1-206ENST00000372596 NEBP20929 6669 aa3.19□□□□□ -1.9
SCMH1-206ENST00000372596 SYNE1Q8NF91 8797 aaKnown RBP3.17□□□□□ -1.9
SCMH1-206ENST00000372596 KRTAP12-4P60329 112 aa3.14□□□□□ -1.91
SCMH1-206ENST00000372596 SPRR2EP22531 72 aa3.13□□□□□ -1.91
SCMH1-206ENST00000372596 SPRR2BP35325 72 aa3.13□□□□□ -1.91
SCMH1-206ENST00000372596 SPRR2AP35326 72 aa3.13□□□□□ -1.91
SCMH1-206ENST00000372596 KRTAP4-3Q9BYR4 195 aa3.13□□□□□ -1.91
SCMH1-206ENST00000372596 MT1EP04732 61 aa3.12□□□□□ -1.91
SCMH1-206ENST00000372596 MT1LQ93083 61 aa3.12□□□□□ -1.91
SCMH1-206ENST00000372596 LOC100996750A0A140TA64 210 aa3.1□□□□□ -1.91
SCMH1-206ENST00000372596 KRTAP19-4Q3LI73 84 aa3.1□□□□□ -1.91
SCMH1-206ENST00000372596 KRTAP5-9P26371 169 aa3.07□□□□□ -1.92
SCMH1-206ENST00000372596 MT1GP13640 62 aa3.06□□□□□ -1.92
SCMH1-206ENST00000372596 KRTAP20-1Q3LI63 56 aa3.02□□□□□ -1.93
SCMH1-206ENST00000372596 SPRR2DP22532 72 aa3.01□□□□□ -1.93
SCMH1-206ENST00000372596 LCE1AQ5T7P2 110 aa3.01□□□□□ -1.93
SCMH1-206ENST00000372596 KRTAP19-3Q7Z4W3 81 aa2.94□□□□□ -1.94
SCMH1-206ENST00000372596 MT1MQ8N339 61 aa2.94□□□□□ -1.94
SCMH1-206ENST00000372596 LCE3BQ5TA77 95 aa2.9□□□□□ -1.95
SCMH1-206ENST00000372596 KRTAP2-2Q9BYT5 123 aa2.86□□□□□ -1.95
SCMH1-206ENST00000372596 KRTAP5-5Q701N2 237 aaPredicted RBP2.85□□□□□ -1.95
SCMH1-206ENST00000372596 PRM1P04553 51 aa2.84□□□□□ -1.95
SCMH1-206ENST00000372596 KRTAP4-9Q9BYQ8 210 aa2.83□□□□□ -1.96
SCMH1-206ENST00000372596 LCE5AQ5TCM9 118 aa2.81□□□□□ -1.96
SCMH1-206ENST00000372596 MT1AP04731 61 aa2.81□□□□□ -1.96
SCMH1-206ENST00000372596 LCE3EQ5T5B0 92 aa2.73□□□□□ -1.97
SCMH1-206ENST00000372596 MT4P47944 62 aa2.73□□□□□ -1.97
SCMH1-206ENST00000372596 LCE3DQ9BYE3 92 aa2.73□□□□□ -1.97
SCMH1-206ENST00000372596 KRTAP6-1Q3LI64 71 aa2.7□□□□□ -1.98
SCMH1-206ENST00000372596 HMCN1Q96RW7 5635 aa2.65□□□□□ -1.99
SCMH1-206ENST00000372596 KRTAP6-2Q3LI66 62 aa2.63□□□□□ -1.99
SCMH1-206ENST00000372596 LCE1DQ5T752 114 aa2.63□□□□□ -1.99
SCMH1-206ENST00000372596 KRTAP4-6Q9BYQ5 205 aa2.59□□□□□ -2
SCMH1-206ENST00000372596 LCE1EQ5T753 118 aa2.58□□□□□ -2
SCMH1-206ENST00000372596 GPR98Q8WXG9 6306 aa2.58□□□□□ -2
SCMH1-206ENST00000372596 LCE4AQ5TA78 99 aa2.52□□□□□ -2.01
SCMH1-206ENST00000372596 KRTAP5-4Q6L8H1 288 aa2.44□□□□□ -2.02
SCMH1-206ENST00000372596 KRTAP9-4Q9BYQ2 154 aa2.44□□□□□ -2.02
SCMH1-206ENST00000372596 AHNAK2Q8IVF2 5795 aa2.42□□□□□ -2.02
SCMH1-206ENST00000372596 KRTAP20-2Q3LI61 65 aa2.41□□□□□ -2.02
SCMH1-206ENST00000372596 MT3P25713 68 aa2.37□□□□□ -2.03
SCMH1-206ENST00000372596 KRTAP5-3Q6L8H2 238 aa2.32□□□□□ -2.04
SCMH1-206ENST00000372596 KRTAP5-10Q6L8G5 202 aa2.28□□□□□ -2.04
SCMH1-206ENST00000372596 MUC19Q7Z5P9 8384 aa2.25□□□□□ -2.05
SCMH1-206ENST00000372596 KRTAP4-11Q9BYQ6 195 aa2.2□□□□□ -2.06
SCMH1-206ENST00000372596 KRTAP9-9Q9BYP9 154 aa2.18□□□□□ -2.06
SCMH1-206ENST00000372596 MUC5BQ9HC84 5762 aaPredicted RBP2.16□□□□□ -2.06
SCMH1-206ENST00000372596 LCE1FQ5T754 118 aa2.15□□□□□ -2.07
SCMH1-206ENST00000372596 MUC5ACP98088 5654 aa2.14□□□□□ -2.07
SCMH1-206ENST00000372596 KRTAP5-2Q701N4 177 aa2.14□□□□□ -2.07
SCMH1-206ENST00000372596 LCE1BQ5T7P3 118 aa2.12□□□□□ -2.07
SCMH1-206ENST00000372596 KRTAP5-7Q6L8G8 165 aa2.12□□□□□ -2.07
SCMH1-206ENST00000372596 KRTAP4-12Q9BQ66 201 aa2.11□□□□□ -2.07
SCMH1-206ENST00000372596 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
SCMH1-206ENST00000372596 KRTAP5-1Q6L8H4 278 aa1.97□□□□□ -2.09
SCMH1-206ENST00000372596 AHNAKQ09666 5890 aaKnown RBP1.94□□□□□ -2.1
SCMH1-206ENST00000372596 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
SCMH1-206ENST00000372596 KRTAP4-2Q9BYR5 136 aa1.82□□□□□ -2.12
SCMH1-206ENST00000372596 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.12
SCMH1-206ENST00000372596 LCE1CQ5T751 118 aa1.75□□□□□ -2.13
SCMH1-206ENST00000372596 KRTAP21-2Q3LI59 83 aa1.68□□□□□ -2.14
SCMH1-206ENST00000372596 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.6□□□□□ -2.15
SCMH1-206ENST00000372596 KRTAP5-11Q6L8G4 156 aa1.56□□□□□ -2.16
SCMH1-206ENST00000372596 PHGR1C9JFL3 82 aa1.43□□□□□ -2.18
SCMH1-206ENST00000372596 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 74.7 ms