RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 USH2AO75445 5202 aa3.42□□□□□ -1.86
NUP188-201ENST00000372577 LCE3DQ9BYE3 92 aa3.38□□□□□ -1.87
NUP188-201ENST00000372577 LCE2AQ5TA79 106 aaPredicted RBP3.38□□□□□ -1.87
NUP188-201ENST00000372577 LCE2DQ5TA82 110 aaPredicted RBP3.35□□□□□ -1.87
NUP188-201ENST00000372577 MT1MQ8N339 61 aa3.35□□□□□ -1.87
NUP188-201ENST00000372577 LCE3EQ5T5B0 92 aa3.34□□□□□ -1.87
NUP188-201ENST00000372577 KRTAP4-7Q9BYR0 210 aa3.33□□□□□ -1.88
NUP188-201ENST00000372577 MT3P25713 68 aa3.28□□□□□ -1.88
NUP188-201ENST00000372577 KRTAP19-7Q3SYF9 63 aa3.26□□□□□ -1.89
NUP188-201ENST00000372577 KRTAP9-2Q9BYQ4 174 aa3.22□□□□□ -1.89
NUP188-201ENST00000372577 SSPOA2VEC9 5147 aa3.18□□□□□ -1.9
NUP188-201ENST00000372577 MT1AP04731 61 aa3.14□□□□□ -1.91
NUP188-201ENST00000372577 LOC100996750A0A140TA64 210 aa3.13□□□□□ -1.91
NUP188-201ENST00000372577 KRTAP2-3P0C7H8 128 aa3.13□□□□□ -1.91
NUP188-201ENST00000372577 KRTAP2-4Q9BYR9 128 aa3.13□□□□□ -1.91
NUP188-201ENST00000372577 KRTAP2-1Q9BYU5 128 aa3.13□□□□□ -1.91
NUP188-201ENST00000372577 KRTAP4-3Q9BYR4 195 aa3.12□□□□□ -1.91
NUP188-201ENST00000372577 LCE1AQ5T7P2 110 aa3.08□□□□□ -1.92
NUP188-201ENST00000372577 FCGBPQ9Y6R7 5405 aaPredicted RBP3.06□□□□□ -1.92
NUP188-201ENST00000372577 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
NUP188-201ENST00000372577 MT4P47944 62 aa3.04□□□□□ -1.92
NUP188-201ENST00000372577 KRTAP9-6A0A140TA67 174 aa3.02□□□□□ -1.93
NUP188-201ENST00000372577 PRM1P04553 51 aa3□□□□□ -1.93
NUP188-201ENST00000372577 LCE1DQ5T752 114 aa3□□□□□ -1.93
NUP188-201ENST00000372577 KRTAP6-3Q3LI67 103 aa2.99□□□□□ -1.93
NUP188-201ENST00000372577 LCE5AQ5TCM9 118 aa2.99□□□□□ -1.93
NUP188-201ENST00000372577 SYNE1Q8NF91 8797 aaKnown RBP2.96□□□□□ -1.94
NUP188-201ENST00000372577 MACF1Q9UPN3 7388 aaKnown RBP2.94□□□□□ -1.94
NUP188-201ENST00000372577 KRTAP9-6A8MVA2 160 aa2.94□□□□□ -1.94
NUP188-201ENST00000372577 KMT2DO14686 5537 aa2.9□□□□□ -1.94
NUP188-201ENST00000372577 KRTAP9-4Q9BYQ2 154 aa2.89□□□□□ -1.95
NUP188-201ENST00000372577 KRTAP6-1Q3LI64 71 aa2.88□□□□□ -1.95
NUP188-201ENST00000372577 MUC12Q9UKN1 5478 aa2.88□□□□□ -1.95
NUP188-201ENST00000372577 MDN1Q9NU22 5596 aa2.87□□□□□ -1.95
NUP188-201ENST00000372577 LCE4AQ5TA78 99 aa2.87□□□□□ -1.95
NUP188-201ENST00000372577 KRTAP20-1Q3LI63 56 aa2.85□□□□□ -1.95
NUP188-201ENST00000372577 KRTAP4-9Q9BYQ8 210 aa2.85□□□□□ -1.95
NUP188-201ENST00000372577 DSTQ03001 7570 aaKnown RBP2.85□□□□□ -1.95
NUP188-201ENST00000372577 KRTAP9-7A8MTY7 169 aa2.85□□□□□ -1.95
NUP188-201ENST00000372577 SYNE2Q8WXH0 6885 aaKnown RBP2.84□□□□□ -1.96
NUP188-201ENST00000372577 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.83□□□□□ -1.96
NUP188-201ENST00000372577 KRTAP6-2Q3LI66 62 aa2.8□□□□□ -1.96
NUP188-201ENST00000372577 KRTAP2-2Q9BYT5 123 aa2.75□□□□□ -1.97
NUP188-201ENST00000372577 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
NUP188-201ENST00000372577 LCE1EQ5T753 118 aa2.75□□□□□ -1.97
NUP188-201ENST00000372577 LCE1FQ5T754 118 aa2.75□□□□□ -1.97
NUP188-201ENST00000372577 OBSCNQ5VST9 7968 aa2.73□□□□□ -1.97
NUP188-201ENST00000372577 KRTAP5-9P26371 169 aa2.68□□□□□ -1.98
NUP188-201ENST00000372577 KRTAP20-2Q3LI61 65 aa2.41□□□□□ -2.02
NUP188-201ENST00000372577 NEBP20929 6669 aa2.41□□□□□ -2.02
NUP188-201ENST00000372577 KRTAP9-9Q9BYP9 154 aa2.37□□□□□ -2.03
NUP188-201ENST00000372577 KRTAP4-6Q9BYQ5 205 aa2.36□□□□□ -2.03
NUP188-201ENST00000372577 GPR98Q8WXG9 6306 aa2.34□□□□□ -2.03
NUP188-201ENST00000372577 KRTAP5-4Q6L8H1 288 aa2.31□□□□□ -2.04
NUP188-201ENST00000372577 KRTAP5-5Q701N2 237 aaPredicted RBP2.31□□□□□ -2.04
NUP188-201ENST00000372577 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
NUP188-201ENST00000372577 HMCN1Q96RW7 5635 aa2.21□□□□□ -2.06
NUP188-201ENST00000372577 KRTAP4-11Q9BYQ6 195 aa2.18□□□□□ -2.06
NUP188-201ENST00000372577 KRTAP4-4Q9BYR3 166 aa2.03□□□□□ -2.09
NUP188-201ENST00000372577 KRTAP5-3Q6L8H2 238 aa2.01□□□□□ -2.09
NUP188-201ENST00000372577 KRTAP4-12Q9BQ66 201 aa2.01□□□□□ -2.09
NUP188-201ENST00000372577 KRTAP4-2Q9BYR5 136 aa2.01□□□□□ -2.09
NUP188-201ENST00000372577 AHNAK2Q8IVF2 5795 aa1.94□□□□□ -2.1
NUP188-201ENST00000372577 KRTAP5-2Q701N4 177 aa1.93□□□□□ -2.1
NUP188-201ENST00000372577 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
NUP188-201ENST00000372577 KRTAP5-10Q6L8G5 202 aa1.84□□□□□ -2.11
NUP188-201ENST00000372577 MUC5ACP98088 5654 aa1.83□□□□□ -2.12
NUP188-201ENST00000372577 KRTAP5-8O75690 187 aa1.76□□□□□ -2.13
NUP188-201ENST00000372577 KRTAP5-7Q6L8G8 165 aa1.69□□□□□ -2.14
NUP188-201ENST00000372577 KRTAP5-11Q6L8G4 156 aa1.68□□□□□ -2.14
NUP188-201ENST00000372577 KRTAP5-1Q6L8H4 278 aa1.63□□□□□ -2.15
NUP188-201ENST00000372577 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.58□□□□□ -2.16
NUP188-201ENST00000372577 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
NUP188-201ENST00000372577 AHNAKQ09666 5890 aaKnown RBP1.58□□□□□ -2.16
NUP188-201ENST00000372577 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
NUP188-201ENST00000372577 KRTAP21-1Q3LI58 79 aa1.42□□□□□ -2.18
NUP188-201ENST00000372577 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 6.7 ms